RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 TRIM49D1C9J1S8 452 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 H0YGG7 62 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 TAPBPO15533 448 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 SRPX2O60687 465 aaPredicted RBP12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 KRT38O76015 456 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 MED26O95402 600 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 HBQ1P09105 142 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 TCN2P20062 427 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 ITGAXP20702 1163 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 HRH2P25021 359 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 CNTFP26441 200 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 GDF5P43026 501 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 GLRBP48167 497 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 ARF3P61204 181 aaPredicted RBP12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 CSNK1G2P78368 415 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 RELAQ04206 551 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 DNASE1L3Q13609 305 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 FBXO48Q5FWF7 155 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 TCTE1Q5JU00 501 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 WASHC2DQ5SRD0 308 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 C1orf189Q5VU69 101 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 ADGRD1Q6QNK2 874 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 FAM198BQ6UWH4 519 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 TAOK1Q7L7X3 1001 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 THOC6Q86W42 341 aaKnown RBP12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 KLHDC8AQ8IYD2 350 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 DTWD1Q8N5C7 304 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 PDPRQ8NCN5 879 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 STARD8Q92502 1023 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 EXT2Q93063 718 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 SLC45A3Q96JT2 553 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 TSNARE1Q96NA8 513 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 GPR78Q96P69 363 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 GBP5Q96PP8 586 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 ATOH8Q96SQ7 321 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 HAUS8Q9BT25 410 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 NDC1Q9BTX1 674 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 VPS11Q9H270 941 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 SRPK3Q9UPE1 567 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 SLC22A14Q9Y267 594 aa12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 URB1O60287 2271 aaKnown RBP12.98□□□□□ -0.33
SOX2-OT-209ENST00000485035 ACACAQ13085 2346 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 FEZF1A0PJY2 475 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 C21orf140B9A014 251 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 P2RX6O15547 441 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 KERAO60938 352 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 WDR47O94967 919 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 KLHL2O95198 593 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 SHBGP04278 402 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 EIF2S1P05198 315 aaKnown RBP12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 KLK3P07288 261 aaPredicted RBP12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 CAPN1P07384 714 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 SNRPAP09012 282 aaKnown RBP12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 CYP4F2P78329 520 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 GRM7Q14831 915 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 FAM83EQ2M2I3 478 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 ERCC6LQ2NKX8 1250 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 PRTGQ2VWP7 1150 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 CDKL4Q5MAI5 379 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 CATSPEREQ5SY80 951 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 WDR93Q6P2C0 686 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 TTLL10Q6ZVT0 673 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 GPR155Q7Z3F1 870 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 PLD6Q8N2A8 252 aaKnown RBP12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 TTC29Q8NA56 475 aaPredicted RBP12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 ABHD11Q8NFV4 315 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 STAG3L4Q8TBR4 150 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 UBLCP1Q8WVY7 318 aaPredicted RBP12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 NEIL2Q969S2 332 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 C10orf90Q96M02 699 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 EFHD1Q9BUP0 239 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 CUTCQ9NTM9 273 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 TXLNGQ9NUQ3 528 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 ZNF358Q9NW07 568 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 CD274Q9NZQ7 290 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 FETUBQ9UGM5 382 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 PTBP2Q9UKA9 531 aaKnown RBP12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 PCDHGA6Q9Y5G7 932 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 ITPR1Q14643 2758 aa12.97□□□□□ -0.33
SOX2-OT-209ENST00000485035 A0A1B0GX78 115 aa12.96□□□□□ -0.33
SOX2-OT-209ENST00000485035 ZNF891A8MT65 544 aaPredicted RBP12.96□□□□□ -0.33
SOX2-OT-209ENST00000485035 SUPT3HB4E1H0 165 aa12.96□□□□□ -0.33
SOX2-OT-209ENST00000485035 UBXN8O00124 270 aa12.96□□□□□ -0.33
SOX2-OT-209ENST00000485035 NKX2-8O15522 239 aa12.96□□□□□ -0.33
SOX2-OT-209ENST00000485035 KATNA1O75449 491 aa12.96□□□□□ -0.33
SOX2-OT-209ENST00000485035 SUPT3HO75486 399 aa12.96□□□□□ -0.33
SOX2-OT-209ENST00000485035 RFPL1O75677 317 aa12.96□□□□□ -0.33
SOX2-OT-209ENST00000485035 STATHP02808 62 aa12.96□□□□□ -0.33
SOX2-OT-209ENST00000485035 MTHFD2P13995 350 aa12.96□□□□□ -0.33
SOX2-OT-209ENST00000485035 GGT5P36269 586 aa12.96□□□□□ -0.33
SOX2-OT-209ENST00000485035 BCL6P41182 706 aa12.96□□□□□ -0.33
SOX2-OT-209ENST00000485035 HSPA7P48741 367 aa12.96□□□□□ -0.33
SOX2-OT-209ENST00000485035 ARSFP54793 590 aa12.96□□□□□ -0.33
SOX2-OT-209ENST00000485035 RPS18P62269 152 aaKnown RBP12.96□□□□□ -0.33
SOX2-OT-209ENST00000485035 SNRPNP63162 240 aaKnown RBP12.96□□□□□ -0.33
SOX2-OT-209ENST00000485035 DCDP81605 110 aaKnown RBP12.96□□□□□ -0.33
SOX2-OT-209ENST00000485035 NFKB2Q00653 900 aa12.96□□□□□ -0.33
SOX2-OT-209ENST00000485035 MEF2AQ02078 507 aaPredicted RBP12.96□□□□□ -0.33
SOX2-OT-209ENST00000485035 ACAP2Q15057 778 aa12.96□□□□□ -0.33
SOX2-OT-209ENST00000485035 HKDC1Q2TB90 917 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms