RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 IL6P05231 212 aa25.3■■□□□ 1.64
SHOX2-204ENST00000483851 MTHFD1P11586 935 aaKnown RBP25.3■■□□□ 1.64
SHOX2-204ENST00000483851 CXCR2P25025 360 aa25.3■■□□□ 1.64
SHOX2-204ENST00000483851 SRP54P61011 504 aaKnown RBP25.3■■□□□ 1.64
SHOX2-204ENST00000483851 SLBPQ14493 270 aaKnown RBP eCLIP25.3■■□□□ 1.64
SHOX2-204ENST00000483851 RPE65Q16518 533 aa25.3■■□□□ 1.64
SHOX2-204ENST00000483851 Q6ZSR6 202 aa25.3■■□□□ 1.64
SHOX2-204ENST00000483851 KRT78Q8N1N4 520 aa25.3■■□□□ 1.64
SHOX2-204ENST00000483851 BIRC7Q96CA5 298 aa25.3■■□□□ 1.64
SHOX2-204ENST00000483851 MYCBPQ99417 103 aaPredicted RBP25.3■■□□□ 1.64
SHOX2-204ENST00000483851 PLAGL1Q9UM63 463 aa25.3■■□□□ 1.64
SHOX2-204ENST00000483851 PCM1Q15154 2024 aa25.3■■□□□ 1.64
SHOX2-204ENST00000483851 PIPSLA2A3N6 862 aa25.3■■□□□ 1.64
SHOX2-204ENST00000483851 A6NHS1 94 aa25.3■■□□□ 1.64
SHOX2-204ENST00000483851 SMNDC1O75940 238 aaKnown RBP eCLIP25.3■■□□□ 1.64
SHOX2-204ENST00000483851 PIK3CBP42338 1070 aa25.3■■□□□ 1.64
SHOX2-204ENST00000483851 PHEXP78562 749 aa25.3■■□□□ 1.64
SHOX2-204ENST00000483851 KLC1Q07866 573 aa25.3■■□□□ 1.64
SHOX2-204ENST00000483851 KRT33BQ14525 404 aa25.3■■□□□ 1.64
SHOX2-204ENST00000483851 SAMD4BQ5PRF9 694 aaKnown RBP25.3■■□□□ 1.64
SHOX2-204ENST00000483851 IZUMO2Q6UXV1 221 aa25.3■■□□□ 1.64
SHOX2-204ENST00000483851 UBALD2Q8IYN6 164 aa25.3■■□□□ 1.64
SHOX2-204ENST00000483851 OR2L8Q8NGY9 312 aa25.3■■□□□ 1.64
SHOX2-204ENST00000483851 HUS1BQ8NHY5 278 aa25.3■■□□□ 1.64
SHOX2-204ENST00000483851 LRRC58Q96CX6 371 aa25.3■■□□□ 1.64
SHOX2-204ENST00000483851 HHIPQ96QV1 700 aa25.3■■□□□ 1.64
SHOX2-204ENST00000483851 GPR174Q9BXC1 333 aa25.3■■□□□ 1.64
SHOX2-204ENST00000483851 PRMT3O60678 531 aa25.29■■□□□ 1.64
SHOX2-204ENST00000483851 MS4A2Q01362 244 aa25.29■■□□□ 1.64
SHOX2-204ENST00000483851 PTGR1Q14914 329 aa25.29■■□□□ 1.64
SHOX2-204ENST00000483851 TPRG1LQ5T0D9 272 aa25.29■■□□□ 1.64
SHOX2-204ENST00000483851 FAM129CQ86XR2 697 aa25.29■■□□□ 1.64
SHOX2-204ENST00000483851 ABHD11Q8NFV4 315 aa25.29■■□□□ 1.64
SHOX2-204ENST00000483851 SH3KBP1Q96B97 665 aa25.29■■□□□ 1.64
SHOX2-204ENST00000483851 C11orf24Q96F05 449 aaPredicted RBP25.29■■□□□ 1.64
SHOX2-204ENST00000483851 APIPQ96GX9 242 aa25.29■■□□□ 1.64
SHOX2-204ENST00000483851 MTERF1Q99551 399 aaKnown RBP25.29■■□□□ 1.64
SHOX2-204ENST00000483851 CLMPQ9H6B4 373 aa25.29■■□□□ 1.64
SHOX2-204ENST00000483851 KIR3DX1Q9H7L2 352 aa25.29■■□□□ 1.64
SHOX2-204ENST00000483851 PRDM8Q9NQV8 689 aa25.29■■□□□ 1.64
SHOX2-204ENST00000483851 GPR27Q9NS67 375 aa25.29■■□□□ 1.64
SHOX2-204ENST00000483851 SIRT5Q9NXA8 310 aa25.29■■□□□ 1.64
SHOX2-204ENST00000483851 ADA2Q9NZK5 511 aa25.29■■□□□ 1.64
SHOX2-204ENST00000483851 ABCD2Q9UBJ2 740 aa25.29■■□□□ 1.64
SHOX2-204ENST00000483851 SH2B3Q9UQQ2 575 aa25.29■■□□□ 1.64
SHOX2-204ENST00000483851 IGHV1OR15-9A0A0B4J2B8 117 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 A0A1W2PPC4 97 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 ACOT8O14734 319 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 PKLRP30613 574 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 MRPS35P82673 323 aaKnown RBP25.28■■□□□ 1.64
SHOX2-204ENST00000483851 SPIN4Q56A73 249 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 NOXRED1Q6NXP6 359 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 DUS1LQ6P1R4 473 aaKnown RBP25.28■■□□□ 1.64
SHOX2-204ENST00000483851 SPEM1Q8N4L4 309 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 HIPK4Q8NE63 616 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 VPS33AQ96AX1 596 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 NT5DC2Q9H857 520 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 C2orf42Q9NWW7 574 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 SUCOQ9UBS9 1254 aaKnown RBP25.28■■□□□ 1.64
SHOX2-204ENST00000483851 MAPRE3Q9UPY8 281 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 ZBTB32Q9Y2Y4 487 aaPredicted RBP25.28■■□□□ 1.64
SHOX2-204ENST00000483851 C15orf38-AP3S2A0A0A6YYH1 394 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 A0A1W2PPV9 198 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 ASPDHA6ND91 283 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 MAGEB17A8MXT2 336 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 FXYD1O00168 92 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 BCAS2O75934 225 aaPredicted RBP25.28■■□□□ 1.64
SHOX2-204ENST00000483851 MYO1DO94832 1006 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 PCNAP12004 261 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 SERPINB1P30740 379 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 ACSM2AQ08AH3 577 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 ALG11Q2TAA5 492 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 TIGD2Q4W5G0 525 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 ACSM2BQ68CK6 577 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 ARPINQ7Z6K5 226 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 SIX5Q8N196 739 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 TSACCQ96A04 125 aaPredicted RBP25.28■■□□□ 1.64
SHOX2-204ENST00000483851 CLDN23Q96B33 292 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 TAC3Q9UHF0 121 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 DLGAP4Q9Y2H0 992 aa25.28■■□□□ 1.64
SHOX2-204ENST00000483851 C19orf67A6NJJ6 358 aa25.27■■□□□ 1.64
SHOX2-204ENST00000483851 C9JVG2 144 aa25.27■■□□□ 1.64
SHOX2-204ENST00000483851 NFYCQ13952 458 aa25.27■■□□□ 1.64
SHOX2-204ENST00000483851 LAYNQ6UX15 382 aa25.27■■□□□ 1.64
SHOX2-204ENST00000483851 PDSS2Q86YH6 399 aa25.27■■□□□ 1.64
SHOX2-204ENST00000483851 CAMKK1Q8N5S9 505 aa25.27■■□□□ 1.64
SHOX2-204ENST00000483851 DNAJB8Q8NHS0 232 aa25.27■■□□□ 1.64
SHOX2-204ENST00000483851 TESCQ96BS2 214 aa25.27■■□□□ 1.64
SHOX2-204ENST00000483851 APOLD1Q96LR9 279 aa25.27■■□□□ 1.64
SHOX2-204ENST00000483851 FOXQ1Q9C009 403 aa25.27■■□□□ 1.64
SHOX2-204ENST00000483851 TBC1D29Q9UFV1 150 aa25.27■■□□□ 1.64
SHOX2-204ENST00000483851 CD300AQ9UGN4 299 aa25.27■■□□□ 1.64
SHOX2-204ENST00000483851 LRP4O75096 1905 aa25.27■■□□□ 1.64
SHOX2-204ENST00000483851 EYSQ5T1H1 3165 aa25.26■■□□□ 1.63
SHOX2-204ENST00000483851 PEX1O43933 1283 aa25.26■■□□□ 1.63
SHOX2-204ENST00000483851 TNFP01375 233 aa25.26■■□□□ 1.63
SHOX2-204ENST00000483851 CDH1P12830 882 aa25.26■■□□□ 1.63
SHOX2-204ENST00000483851 SDC1P18827 310 aa25.26■■□□□ 1.63
SHOX2-204ENST00000483851 C21orf58P58505 322 aa25.26■■□□□ 1.63
SHOX2-204ENST00000483851 DDX39BQ13838 428 aaKnown RBP25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms