RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 NEURL1O76050 574 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 TOXO94900 526 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 APOC2P02655 101 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 CD46P15529 392 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 PSMA3P25788 255 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 EMP3P54852 163 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 PPP2R2AP63151 447 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 SEMA3AQ14563 771 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 CCDC38Q502W7 563 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 KCTD11Q693B1 232 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 PLAG1Q6DJT9 500 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 LRRC8BQ6P9F7 803 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 KLHDC8BQ8IXV7 354 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 KATNAL2Q8IYT4 538 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 KRT222Q8N1A0 295 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 ARHGEF39Q8N4T4 335 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 TAB3Q8N5C8 712 aaPredicted RBP10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 CPSF7Q8N684 471 aaKnown RBP10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 CSNK1A1LQ8N752 337 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 CHDHQ8NE62 594 aaPredicted RBP10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 ACTL9Q8TC94 416 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 STYXQ8WUJ0 223 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 ASZ1Q8WWH4 475 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 MVB12AQ96EY5 273 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 SPATA13Q96N96 652 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 ACAT2Q9BWD1 397 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 VN1R1Q9GZP7 353 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 KCNK13Q9HB14 408 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 FEZ2Q9UHY8 353 aaPredicted RBP10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 RNF6Q9Y252 685 aa10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 RPH3AQ9Y2J0 694 aaPredicted RBP10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 R3HDM2Q9Y2K5 976 aaKnown RBP10.27□□□□□ -0.77
SMARCC1-205ENST00000483847 MACROD2A1Z1Q3 448 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 FOXO6A8MYZ6 492 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 P2RX6O15547 441 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 AKR1B10O60218 316 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 C1orf105O95561 183 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 SP1P08047 785 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 ANXA5P08758 320 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 ZNF24P17028 368 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 MSX1P28360 303 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 UBASH3AP57075 661 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 EIF3EP60228 445 aaKnown RBP10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 OC90Q02509 493 aaPredicted RBP10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 CEBPEQ15744 281 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 MEP1AQ16819 746 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 ZNF468Q5VIY5 522 aaPredicted RBP10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 CPEB2Q7Z5Q1 589 aaKnown RBP10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 CD163Q86VB7 1156 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 CCDC71Q8IV32 467 aaPredicted RBP10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 CDKL3Q8IVW4 592 aaPredicted RBP10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 RCOR2Q8IZ40 523 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 RPRMLQ8N4K4 120 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 TMEM178AQ8NBL3 297 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 OR13J1Q8NGT2 312 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 LILRB4Q8NHJ6 448 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 HMGCLL1Q8TB92 370 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 METTL21AQ8WXB1 218 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 KRT35Q92764 455 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 HDAC10Q969S8 669 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 RAD51AP1Q96B01 352 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 CYTH2Q99418 400 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 CHP1Q99653 195 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 RAB11FIP5Q9BXF6 653 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 KCNN3Q9UGI6 736 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 SLC2A6Q9UGQ3 507 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 TTC7AQ9ULT0 858 aaPredicted RBP10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 ALG6Q9Y672 507 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 JMJD1CQ15652 2540 aa10.26□□□□□ -0.77
SMARCC1-205ENST00000483847 IGKV1-8A0A0C4DH67 115 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 A0A1B0GTH9 108 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 GABRR3A8MPY1 467 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 METTL18O95568 372 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 STATHP02808 62 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 APOA4P06727 396 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 TPOP07202 933 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 HOXD4P09016 255 aaPredicted RBP10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 RBP3P10745 1247 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 AOAHP28039 575 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 MYBPHQ13203 477 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 TCEAL1Q15170 157 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 MAPKAPK3Q16644 382 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 MINDY4Q4G0A6 757 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 MFSD4BQ5TF39 518 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 CCDC181Q5TID7 509 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 SLC25A25Q6KCM7 469 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 DARS2Q6PI48 645 aaKnown RBP10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 Q71RC1 249 aaPredicted RBP10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 ZNF534Q76KX8 674 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 LDB1Q86U70 411 aaPredicted RBP10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 ZNF227Q86WZ6 799 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 FAM57AQ8TBR7 257 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 IQCDQ96DY2 449 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 OR2A5Q96R48 311 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 SMR3AQ99954 134 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 CARD6Q9BX69 1037 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 DRC3Q9H069 523 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 KCNJ16Q9NPI9 418 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 GNPTGQ9UJJ9 305 aa10.25□□□□□ -0.77
SMARCC1-205ENST00000483847 HEATR5BQ9P2D3 2071 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms