RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 A0A1W2PQY0 241 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 AIREO43918 545 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 MRPS14O60783 128 aaKnown RBP17.52■□□□□ 0.4
SSR4-209ENST00000482902 FAM20BO75063 409 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 GKP32189 559 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 SMAD3P84022 425 aaKnown RBP17.52■□□□□ 0.4
SSR4-209ENST00000482902 CDH18Q13634 790 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 SYT16Q17RD7 645 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 RNF165Q6ZSG1 346 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 DET1Q7L5Y6 550 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 MAGIXQ9H6Y5 334 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 TM9SF3Q9HD45 589 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 DCAF13Q9NV06 445 aaKnown RBP17.52■□□□□ 0.4
SSR4-209ENST00000482902 C1orf109Q9NX04 203 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 GLYATL1P3A0A0U1RQE8 302 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 PDZK1P1A8MUH7 402 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 A8MX80 341 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 SMAD6O43541 496 aaKnown RBP17.52■□□□□ 0.4
SSR4-209ENST00000482902 TRBC1P01850 177 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 DBTP11182 482 aaKnown RBP17.52■□□□□ 0.4
SSR4-209ENST00000482902 BCKDHAP12694 445 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 BPIP17213 487 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 KRT20P35900 424 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 KRT6CP48668 564 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 OR2B6P58173 313 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 BCL2L1Q07817 233 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 KRR1Q13601 381 aaKnown RBP17.52■□□□□ 0.4
SSR4-209ENST00000482902 ARHGEF7Q14155 803 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 CHRNA6Q15825 494 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 USP39Q53GS9 565 aaKnown RBP17.52■□□□□ 0.4
SSR4-209ENST00000482902 PRSS36Q5K4E3 855 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 ZNF544Q6NX49 715 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 SHQ1Q6PI26 577 aaKnown RBP17.52■□□□□ 0.4
SSR4-209ENST00000482902 GPR149Q86SP6 731 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 USP7Q93009 1102 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 ITPAQ9BY32 194 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 MRPL9Q9BYD2 267 aaKnown RBP17.52■□□□□ 0.4
SSR4-209ENST00000482902 PRDM8Q9NQV8 689 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 ASIC5Q9NY37 505 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 STOML2Q9UJZ1 356 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 ERVW-1Q9UQF0 538 aa17.52■□□□□ 0.4
SSR4-209ENST00000482902 TRBV5-4A0A0C4DH59 114 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 ZW10O43264 779 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 CREG1O75629 220 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 PARNO95453 639 aaKnown RBP17.51■□□□□ 0.39
SSR4-209ENST00000482902 HNF1BP35680 557 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 TM4SF4P48230 202 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 NRIP1P48552 1158 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 LAPTM4AQ15012 233 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 MAD2L1BPQ15013 274 aaPredicted RBP17.51■□□□□ 0.39
SSR4-209ENST00000482902 TCTN1Q2MV58 587 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 CPZQ66K79 652 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 MACC1Q6ZN28 852 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 GATAD2AQ86YP4 633 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 UBQLNLQ8IYU4 475 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 BEND7Q8N7W2 519 aaPredicted RBP17.51■□□□□ 0.39
SSR4-209ENST00000482902 SLC43A3Q8NBI5 491 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 HJURPQ8NCD3 748 aaPredicted RBP17.51■□□□□ 0.39
SSR4-209ENST00000482902 ALG14Q96F25 216 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 DDX28Q9NUL7 540 aaKnown RBP17.51■□□□□ 0.39
SSR4-209ENST00000482902 ADPRHL2Q9NX46 363 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 AFF4Q9UHB7 1163 aaKnown RBP17.51■□□□□ 0.39
SSR4-209ENST00000482902 AP3M1Q9Y2T2 418 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 PCDHGB6Q9Y5F9 930 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 HTTP42858 3142 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 TRBV5-3A0A0A0MS03 114 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 EVPLLA8MZ36 301 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 STK16O75716 305 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 RETP07949 1114 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 GADD45AP24522 165 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 CPSF6Q16630 551 aaKnown RBP eCLIP17.51■□□□□ 0.39
SSR4-209ENST00000482902 LYPLAL1Q5VWZ2 237 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 NXNL2Q5VZ03 156 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 ADGRG2Q8IZP9 1017 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 APCDD1Q8J025 514 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 DCAF4L2Q8NA75 395 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 GABARAPL1Q9H0R8 117 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 NMRK2Q9NPI5 230 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 GMPPBQ9Y5P6 360 aa17.51■□□□□ 0.39
SSR4-209ENST00000482902 FAM220BPB1ANY3 271 aa17.5■□□□□ 0.39
SSR4-209ENST00000482902 SERPINA1P01009 418 aa17.5■□□□□ 0.39
SSR4-209ENST00000482902 EFNA1P20827 205 aaPredicted RBP17.5■□□□□ 0.39
SSR4-209ENST00000482902 PPP3CCP48454 512 aa17.5■□□□□ 0.39
SSR4-209ENST00000482902 DAPP51397 102 aa17.5■□□□□ 0.39
SSR4-209ENST00000482902 MRPS15P82914 257 aaKnown RBP17.5■□□□□ 0.39
SSR4-209ENST00000482902 CDKN3Q16667 212 aa17.5■□□□□ 0.39
SSR4-209ENST00000482902 ZFP69Q49AA0 526 aa17.5■□□□□ 0.39
SSR4-209ENST00000482902 ATG9BQ674R7 924 aa17.5■□□□□ 0.39
SSR4-209ENST00000482902 KIAA1841Q6NSI8 718 aa17.5■□□□□ 0.39
SSR4-209ENST00000482902 CEP68Q76N32 757 aa17.5■□□□□ 0.39
SSR4-209ENST00000482902 C10orf111Q8N326 155 aa17.5■□□□□ 0.39
SSR4-209ENST00000482902 SIMC1Q8NDZ2 872 aa17.5■□□□□ 0.39
SSR4-209ENST00000482902 NETO1Q8TDF5 533 aa17.5■□□□□ 0.39
SSR4-209ENST00000482902 FAM120BQ96EK7 910 aaKnown RBP17.5■□□□□ 0.39
SSR4-209ENST00000482902 ST6GAL2Q96JF0 529 aa17.5■□□□□ 0.39
SSR4-209ENST00000482902 ACPTQ9BZG2 426 aa17.5■□□□□ 0.39
SSR4-209ENST00000482902 RDH14Q9HBH5 336 aa17.5■□□□□ 0.39
SSR4-209ENST00000482902 RNF6Q9Y252 685 aa17.5■□□□□ 0.39
SSR4-209ENST00000482902 BOLA1Q9Y3E2 137 aa17.5■□□□□ 0.39
SSR4-209ENST00000482902 BACE2Q9Y5Z0 518 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms