RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 LOXL2Q9Y4K0 774 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 TNPO3Q9Y5L0 923 aaKnown RBP12.71□□□□□ -0.37
HDAC1-208ENST00000482310 KCNE2Q9Y6J6 123 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 CCDC88CQ9P219 2028 aa12.71□□□□□ -0.38
HDAC1-208ENST00000482310 CHD6Q8TD26 2715 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 FER1L5A0AVI2 2057 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 TMEM150CB9EJG8 249 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 H3BQF6 201 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 MAP3K7O43318 606 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 HCRTR1O43613 425 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 EIF2S1P05198 315 aaKnown RBP12.7□□□□□ -0.38
HDAC1-208ENST00000482310 BPGMP07738 259 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 RPS17P08708 135 aaKnown RBP12.7□□□□□ -0.38
HDAC1-208ENST00000482310 CCL4P13236 92 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 FOLR1P15328 257 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 NELFEP18615 380 aaKnown RBP12.7□□□□□ -0.38
HDAC1-208ENST00000482310 GNAZP19086 355 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 EPORP19235 508 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 CCKBRP32239 447 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 ETV4P43268 484 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 SERPINB4P48594 390 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 CCR8P51685 355 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 CCNG1P51959 295 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 NAGLUP54802 743 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 HSD11B2P80365 405 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 CHIT1Q13231 466 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 SLBPQ14493 270 aaKnown RBP eCLIP12.7□□□□□ -0.38
HDAC1-208ENST00000482310 PCBP2Q15366 365 aaKnown RBP eCLIP12.7□□□□□ -0.38
HDAC1-208ENST00000482310 CLPPQ16740 277 aaPredicted RBP12.7□□□□□ -0.38
HDAC1-208ENST00000482310 UNC50Q53HI1 259 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 LIPMQ5VYY2 423 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 NXPE4Q6UWF7 544 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 RAB11FIP2Q7L804 512 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 ARHGAP22Q7Z5H3 698 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 TMPRSS12Q86WS5 348 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 NUDCD3Q8IVD9 361 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 KLHDC8AQ8IYD2 350 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 GALNT15Q8N3T1 639 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 ZNF740Q8NDX6 193 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 PPP1R14CQ8TAE6 165 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 TRPC4APQ8TEL6 797 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 ZNF483Q8TF39 744 aaPredicted RBP12.7□□□□□ -0.38
HDAC1-208ENST00000482310 OR6C1Q96RD1 312 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 PLCD4Q9BRC7 762 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 TWSG1Q9GZX9 223 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 NOL11Q9H8H0 719 aaKnown RBP12.7□□□□□ -0.38
HDAC1-208ENST00000482310 IPPKQ9H8X2 491 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 OXSMQ9NWU1 459 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 AKAP7Q9P0M2 348 aaPredicted RBP12.7□□□□□ -0.38
HDAC1-208ENST00000482310 PISDQ9UG56 409 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 KLK13Q9UKR3 277 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 AKAP13Q12802 2813 aa12.7□□□□□ -0.38
HDAC1-208ENST00000482310 CCDC187A0A096LP49 1063 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 PPP6CO00743 305 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 OR7A17O14581 309 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 CTSVO60911 334 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 SERPIND1P05546 499 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 CTSBP07858 339 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 ANKRD34CP0C6C1 535 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 JMJD7P0C870 316 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 IMPDH1P20839 514 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 BGNP21810 368 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 ETV5P41161 510 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 PIK3CGP48736 1102 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 ATP1A2P50993 1020 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 WDR4P57081 412 aaKnown RBP12.69□□□□□ -0.38
HDAC1-208ENST00000482310 PPP2R2AP63151 447 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 CYP4F2P78329 520 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 CSNK1G2P78368 415 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 ABATP80404 500 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 IRF8Q02556 426 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 CLCQ05315 142 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 TUBB3Q13509 450 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 TRA2AQ13595 282 aaKnown RBP eCLIP12.69□□□□□ -0.38
HDAC1-208ENST00000482310 DOC2AQ14183 400 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 RBBP5Q15291 538 aaKnown RBP12.69□□□□□ -0.38
HDAC1-208ENST00000482310 CHI3L2Q15782 390 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 TMTC4Q5T4D3 741 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 PAQR7Q86WK9 346 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 AGBL5Q8NDL9 886 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 OR52B6Q8NGF0 335 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 KLHL6Q8WZ60 621 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 PMEPA1Q969W9 287 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 CCDC126Q96EE4 140 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 L3HYPDHQ96EM0 354 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 CMKLR1Q99788 373 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 ACTR8Q9H981 624 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 ZBTB26Q9HCK0 441 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 APMAPQ9HDC9 416 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 STARD5Q9NSY2 213 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 PDP2Q9P2J9 529 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 SNX7Q9UNH6 387 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 SDK2Q58EX2 2172 aa12.69□□□□□ -0.38
HDAC1-208ENST00000482310 A0A1B0GTL3 188 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 A0A1W2PNU3 283 aaPredicted RBP12.68□□□□□ -0.38
HDAC1-208ENST00000482310 TMX2-CTNND1H3BSU7 103 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 FFAR3O14843 346 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 GPR42O15529 346 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 ATP8B1O43520 1251 aa12.68□□□□□ -0.38
HDAC1-208ENST00000482310 OR1F1O43749 312 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms