RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 PCDHGA10Q9Y5H3 936 aa17.67■□□□□ 0.42
CLK1-211ENST00000481641 GFYI3L273 518 aa17.66■□□□□ 0.42
CLK1-211ENST00000481641 CBX6O95503 412 aa17.66■□□□□ 0.42
CLK1-211ENST00000481641 VARSP26640 1264 aaKnown RBP17.66■□□□□ 0.42
CLK1-211ENST00000481641 HSD17B2P37059 387 aa17.66■□□□□ 0.42
CLK1-211ENST00000481641 TIAL1Q01085 375 aaKnown RBP eCLIP17.66■□□□□ 0.42
CLK1-211ENST00000481641 SYT16Q17RD7 645 aa17.66■□□□□ 0.42
CLK1-211ENST00000481641 RNASEH2BQ5TBB1 312 aaKnown RBP17.66■□□□□ 0.42
CLK1-211ENST00000481641 AGAP7PQ5VUJ5 663 aa17.66■□□□□ 0.42
CLK1-211ENST00000481641 FAAH2Q6GMR7 532 aa17.66■□□□□ 0.42
CLK1-211ENST00000481641 UBE2R2Q712K3 238 aaPredicted RBP17.66■□□□□ 0.42
CLK1-211ENST00000481641 KCNMB4Q86W47 210 aa17.66■□□□□ 0.42
CLK1-211ENST00000481641 PPIL6Q8IXY8 311 aa17.66■□□□□ 0.42
CLK1-211ENST00000481641 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.66■□□□□ 0.42
CLK1-211ENST00000481641 FBXO15Q8NCQ5 510 aaPredicted RBP17.66■□□□□ 0.42
CLK1-211ENST00000481641 AGAP4Q96P64 663 aa17.66■□□□□ 0.42
CLK1-211ENST00000481641 NDNQ99608 321 aa17.66■□□□□ 0.42
CLK1-211ENST00000481641 WDR77Q9BQA1 342 aaPredicted RBP17.66■□□□□ 0.42
CLK1-211ENST00000481641 AARSD1Q9BTE6 412 aaKnown RBP17.66■□□□□ 0.42
CLK1-211ENST00000481641 LHPPQ9H008 270 aa17.66■□□□□ 0.42
CLK1-211ENST00000481641 KLHL42Q9P2K6 505 aa17.66■□□□□ 0.42
CLK1-211ENST00000481641 TRPC4Q9UBN4 977 aa17.66■□□□□ 0.42
CLK1-211ENST00000481641 COPG1Q9Y678 874 aaKnown RBP17.66■□□□□ 0.42
CLK1-211ENST00000481641 A0A0A6YYC8 382 aaPredicted RBP17.65■□□□□ 0.42
CLK1-211ENST00000481641 ZNF839A8K0R7 811 aa17.65■□□□□ 0.42
CLK1-211ENST00000481641 H7BY64 318 aa17.65■□□□□ 0.42
CLK1-211ENST00000481641 I3L1I5 382 aaPredicted RBP17.65■□□□□ 0.42
CLK1-211ENST00000481641 FOXS1O43638 330 aa17.65■□□□□ 0.42
CLK1-211ENST00000481641 ZBTB14O43829 449 aa17.65■□□□□ 0.42
CLK1-211ENST00000481641 KLHL18O94889 574 aa17.65■□□□□ 0.42
CLK1-211ENST00000481641 CCNDBP1O95273 360 aa17.65■□□□□ 0.42
CLK1-211ENST00000481641 ACPPP15309 386 aa17.65■□□□□ 0.42
CLK1-211ENST00000481641 IMPA1P29218 277 aa17.65■□□□□ 0.42
CLK1-211ENST00000481641 CARSP49589 748 aaKnown RBP17.65■□□□□ 0.42
CLK1-211ENST00000481641 THEMIS2Q5TEJ8 643 aa17.65■□□□□ 0.42
CLK1-211ENST00000481641 IRAK1BP1Q5VVH5 260 aa17.65■□□□□ 0.42
CLK1-211ENST00000481641 ATG9BQ674R7 924 aa17.65■□□□□ 0.42
CLK1-211ENST00000481641 IGFL2Q6UWQ7 119 aa17.65■□□□□ 0.42
CLK1-211ENST00000481641 LINC00696Q6ZRV3 163 aa17.65■□□□□ 0.42
CLK1-211ENST00000481641 SHISA5Q8N114 240 aa17.65■□□□□ 0.42
CLK1-211ENST00000481641 ARHGEF39Q8N4T4 335 aa17.65■□□□□ 0.42
CLK1-211ENST00000481641 AMER3Q8N944 861 aa17.65■□□□□ 0.42
CLK1-211ENST00000481641 DNAJB14Q8TBM8 379 aa17.65■□□□□ 0.42
CLK1-211ENST00000481641 CALML6Q8TD86 181 aa17.65■□□□□ 0.42
CLK1-211ENST00000481641 ACTRT1Q8TDG2 376 aa17.65■□□□□ 0.42
CLK1-211ENST00000481641 GRK7Q8WTQ7 553 aa17.65■□□□□ 0.42
CLK1-211ENST00000481641 MMABQ96EY8 250 aaPredicted RBP17.65■□□□□ 0.42
CLK1-211ENST00000481641 CNDP1Q96KN2 507 aa17.65■□□□□ 0.42
CLK1-211ENST00000481641 PRAP1Q96NZ9 151 aa17.65■□□□□ 0.42
CLK1-211ENST00000481641 PLEKHB1Q9UF11 243 aaPredicted RBP17.65■□□□□ 0.42
CLK1-211ENST00000481641 ADAMTS6Q9UKP5 1117 aa17.65■□□□□ 0.42
CLK1-211ENST00000481641 NOVA2Q9UNW9 492 aaKnown RBP17.65■□□□□ 0.42
CLK1-211ENST00000481641 MRPS2Q9Y399 296 aaKnown RBP17.65■□□□□ 0.42
CLK1-211ENST00000481641 IGLV3-12A0A075B6K2 115 aa17.64■□□□□ 0.41
CLK1-211ENST00000481641 A1L4Q6 167 aa17.64■□□□□ 0.41
CLK1-211ENST00000481641 MAP2K7O14733 419 aa17.64■□□□□ 0.41
CLK1-211ENST00000481641 HPP00738 406 aa17.64■□□□□ 0.41
CLK1-211ENST00000481641 ENO3P13929 434 aaPredicted RBP17.64■□□□□ 0.41
CLK1-211ENST00000481641 SKIV2L2P42285 1042 aaKnown RBP17.64■□□□□ 0.41
CLK1-211ENST00000481641 FNTAP49354 379 aa17.64■□□□□ 0.41
CLK1-211ENST00000481641 EMP2P54851 167 aa17.64■□□□□ 0.41
CLK1-211ENST00000481641 EMP3P54852 163 aa17.64■□□□□ 0.41
CLK1-211ENST00000481641 MAT1AQ00266 395 aaKnown RBP17.64■□□□□ 0.41
CLK1-211ENST00000481641 EEF1A2Q05639 463 aaKnown RBP17.64■□□□□ 0.41
CLK1-211ENST00000481641 DHX9Q08211 1270 aaKnown RBP17.64■□□□□ 0.41
CLK1-211ENST00000481641 DSG2Q14126 1118 aa17.64■□□□□ 0.41
CLK1-211ENST00000481641 CRYMQ14894 314 aa17.64■□□□□ 0.41
CLK1-211ENST00000481641 PPP1R7Q15435 360 aa17.64■□□□□ 0.41
CLK1-211ENST00000481641 MSS51Q4VC12 460 aa17.64■□□□□ 0.41
CLK1-211ENST00000481641 MBOAT1Q6ZNC8 495 aa17.64■□□□□ 0.41
CLK1-211ENST00000481641 PPP4R1Q8TF05 950 aa17.64■□□□□ 0.41
CLK1-211ENST00000481641 EEF1AKMT1Q8WVE0 214 aa17.64■□□□□ 0.41
CLK1-211ENST00000481641 RERGQ96A58 199 aaPredicted RBP17.64■□□□□ 0.41
CLK1-211ENST00000481641 MACROD1Q9BQ69 325 aa17.64■□□□□ 0.41
CLK1-211ENST00000481641 FAM167BQ9BTA0 163 aa17.64■□□□□ 0.41
CLK1-211ENST00000481641 DDX47Q9H0S4 455 aaKnown RBP17.64■□□□□ 0.41
CLK1-211ENST00000481641 TRMT1Q9NXH9 659 aaKnown RBP17.64■□□□□ 0.41
CLK1-211ENST00000481641 SLC17A6Q9P2U8 582 aa17.64■□□□□ 0.41
CLK1-211ENST00000481641 CDC14AQ9UNH5 594 aa17.64■□□□□ 0.41
CLK1-211ENST00000481641 SH2B3Q9UQQ2 575 aa17.64■□□□□ 0.41
CLK1-211ENST00000481641 COMMD10Q9Y6G5 202 aa17.64■□□□□ 0.41
CLK1-211ENST00000481641 ANKUB1A6NFN9 424 aa17.63■□□□□ 0.41
CLK1-211ENST00000481641 IDSB3KWA1 339 aa17.63■□□□□ 0.41
CLK1-211ENST00000481641 CELA2AP08217 269 aa17.63■□□□□ 0.41
CLK1-211ENST00000481641 COX6A1P12074 109 aa17.63■□□□□ 0.41
CLK1-211ENST00000481641 EZRP15311 586 aaKnown RBP17.63■□□□□ 0.41
CLK1-211ENST00000481641 PGAM1P18669 254 aa17.63■□□□□ 0.41
CLK1-211ENST00000481641 GABRB3P28472 473 aa17.63■□□□□ 0.41
CLK1-211ENST00000481641 SLC26A3P40879 764 aa17.63■□□□□ 0.41
CLK1-211ENST00000481641 EFNA3P52797 238 aa17.63■□□□□ 0.41
CLK1-211ENST00000481641 PGGT1BP53609 377 aa17.63■□□□□ 0.41
CLK1-211ENST00000481641 ABATP80404 500 aa17.63■□□□□ 0.41
CLK1-211ENST00000481641 C4orf17Q53FE4 359 aa17.63■□□□□ 0.41
CLK1-211ENST00000481641 RBM20Q5T481 1227 aaKnown RBP17.63■□□□□ 0.41
CLK1-211ENST00000481641 IGDCC3Q8IVU1 814 aa17.63■□□□□ 0.41
CLK1-211ENST00000481641 LMNTD2Q8IXW0 634 aa17.63■□□□□ 0.41
CLK1-211ENST00000481641 C2CD4AQ8NCU7 369 aaPredicted RBP17.63■□□□□ 0.41
CLK1-211ENST00000481641 CATSPER1Q8NEC5 780 aa17.63■□□□□ 0.41
CLK1-211ENST00000481641 VPS50Q96JG6 964 aa17.63■□□□□ 0.41
CLK1-211ENST00000481641 UTP6Q9NYH9 597 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms