RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 PLD3Q8IV08 490 aa10.14□□□□□ -0.79
SSBP1-210ENST00000481508 MCATQ8IVS2 390 aaKnown RBP10.14□□□□□ -0.79
SSBP1-210ENST00000481508 TMEM151BQ8IW70 566 aa10.14□□□□□ -0.79
SSBP1-210ENST00000481508 LSM14AQ8ND56 463 aaKnown RBP10.14□□□□□ -0.79
SSBP1-210ENST00000481508 AENQ8WTP8 325 aaKnown RBP10.14□□□□□ -0.79
SSBP1-210ENST00000481508 ANKRD7Q92527 254 aa10.14□□□□□ -0.79
SSBP1-210ENST00000481508 EXT2Q93063 718 aa10.14□□□□□ -0.79
SSBP1-210ENST00000481508 ISL2Q96A47 359 aa10.14□□□□□ -0.79
SSBP1-210ENST00000481508 KIAA1191Q96A73 305 aa10.14□□□□□ -0.79
SSBP1-210ENST00000481508 ESAMQ96AP7 390 aa10.14□□□□□ -0.79
SSBP1-210ENST00000481508 SLC22A18Q96BI1 424 aa10.14□□□□□ -0.79
SSBP1-210ENST00000481508 ATOH8Q96SQ7 321 aa10.14□□□□□ -0.79
SSBP1-210ENST00000481508 PLCD4Q9BRC7 762 aa10.14□□□□□ -0.79
SSBP1-210ENST00000481508 ZPBPQ9BS86 351 aa10.14□□□□□ -0.79
SSBP1-210ENST00000481508 ASPSCR1Q9BZE9 553 aa10.14□□□□□ -0.79
SSBP1-210ENST00000481508 CHRNA10Q9GZZ6 450 aa10.14□□□□□ -0.79
SSBP1-210ENST00000481508 SPNS1Q9H2V7 528 aa10.14□□□□□ -0.79
SSBP1-210ENST00000481508 ALG9Q9H6U8 611 aa10.14□□□□□ -0.79
SSBP1-210ENST00000481508 CPNE5Q9HCH3 593 aa10.14□□□□□ -0.79
SSBP1-210ENST00000481508 MRPS30Q9NP92 439 aaKnown RBP10.14□□□□□ -0.79
SSBP1-210ENST00000481508 CCDC177Q9NQR7 707 aaPredicted RBP10.14□□□□□ -0.79
SSBP1-210ENST00000481508 INTS7Q9NVH2 962 aaKnown RBP10.14□□□□□ -0.79
SSBP1-210ENST00000481508 EURLQ9NYK6 297 aa10.14□□□□□ -0.79
SSBP1-210ENST00000481508 ZNF180Q9UJW8 692 aa10.14□□□□□ -0.79
SSBP1-210ENST00000481508 PCSK5Q92824 1860 aa10.14□□□□□ -0.79
SSBP1-210ENST00000481508 ICE1Q9Y2F5 2266 aa10.14□□□□□ -0.79
SSBP1-210ENST00000481508 CACNA1DQ01668 2161 aa10.14□□□□□ -0.79
SSBP1-210ENST00000481508 A0A0J9YVX5 310 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 ZNF839A8K0R7 811 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 H7BY64 318 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 UBXN8O00124 270 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 TERTO14746 1132 aaKnown RBP10.13□□□□□ -0.79
SSBP1-210ENST00000481508 LTA4HP09960 611 aaKnown RBP10.13□□□□□ -0.79
SSBP1-210ENST00000481508 HIST1H2AGP0C0S8 130 aaPredicted RBP10.13□□□□□ -0.79
SSBP1-210ENST00000481508 MSL3P1P0C860 447 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 CDH1P12830 882 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 LIFP15018 202 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 NPPBP16860 134 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 HIST1H2ADP20671 130 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 F8A1P23610 371 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 CD82P27701 267 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 CRABP2P29373 138 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 RORAP35398 523 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 HSD17B3P37058 310 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 GDF5P43026 501 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 GCGRP47871 477 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 GLRBP48167 497 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 ITGA1P56199 1179 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 AP1S2P56377 157 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 CDKL1Q00532 357 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 ILF2Q12905 390 aaKnown RBP10.13□□□□□ -0.79
SSBP1-210ENST00000481508 TGFBIQ15582 683 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 PTCHD3Q3KNS1 767 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 TAF1BQ53T94 588 aaPredicted RBP10.13□□□□□ -0.79
SSBP1-210ENST00000481508 COLEC12Q5KU26 742 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 THEMIS2Q5TEJ8 643 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 WDR93Q6P2C0 686 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 FAM199XQ6PEV8 388 aaPredicted RBP10.13□□□□□ -0.79
SSBP1-210ENST00000481508 FRA10AC1Q70Z53 315 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 GPR155Q7Z3F1 870 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 ADAMTSL2Q86TH1 951 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 TMEM126BQ8IUX1 230 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 CACNA2D3Q8IZS8 1091 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 NLGN4XQ8N0W4 816 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 ZNF655Q8N720 491 aaPredicted RBP10.13□□□□□ -0.79
SSBP1-210ENST00000481508 NLGN4YQ8NFZ3 816 aaPredicted RBP10.13□□□□□ -0.79
SSBP1-210ENST00000481508 OR2W6PQ8NHA6 318 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 EPS8L3Q8TE67 593 aaKnown RBP10.13□□□□□ -0.79
SSBP1-210ENST00000481508 MZB1Q8WU39 189 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 UBLCP1Q8WVY7 318 aaPredicted RBP10.13□□□□□ -0.79
SSBP1-210ENST00000481508 RHBDF1Q96CC6 855 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 HIST1H2AHQ96KK5 128 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 ZNF285Q96NJ3 590 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 PRAP1Q96NZ9 151 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 HIST1H2AJQ99878 128 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 H2AFJQ9BTM1 129 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 PARD6BQ9BYG5 372 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 VPS11Q9H270 941 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 RRAGDQ9NQL2 400 aaPredicted RBP10.13□□□□□ -0.79
SSBP1-210ENST00000481508 PCMTD2Q9NV79 361 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 IL17BQ9UHF5 180 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 PLCL2Q9UPR0 1127 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 MRPS18BQ9Y676 258 aaKnown RBP10.13□□□□□ -0.79
SSBP1-210ENST00000481508 CENPEQ02224 2701 aa10.13□□□□□ -0.79
SSBP1-210ENST00000481508 A0A087X1B8 175 aa10.12□□□□□ -0.79
SSBP1-210ENST00000481508 TARM1B6A8C7 271 aa10.12□□□□□ -0.79
SSBP1-210ENST00000481508 P2RX6O15547 441 aa10.12□□□□□ -0.79
SSBP1-210ENST00000481508 RRP8O43159 456 aaKnown RBP10.12□□□□□ -0.79
SSBP1-210ENST00000481508 ZNF749O43361 778 aa10.12□□□□□ -0.79
SSBP1-210ENST00000481508 PRAMEF4O60810 478 aa10.12□□□□□ -0.79
SSBP1-210ENST00000481508 RFPL1O75677 317 aa10.12□□□□□ -0.79
SSBP1-210ENST00000481508 OR2B3O76000 313 aa10.12□□□□□ -0.79
SSBP1-210ENST00000481508 KRT38O76015 456 aa10.12□□□□□ -0.79
SSBP1-210ENST00000481508 FKBP9O95302 570 aa10.12□□□□□ -0.79
SSBP1-210ENST00000481508 MTHFD2P13995 350 aa10.12□□□□□ -0.79
SSBP1-210ENST00000481508 ITGAXP20702 1163 aa10.12□□□□□ -0.79
SSBP1-210ENST00000481508 TYK2P29597 1187 aa10.12□□□□□ -0.79
SSBP1-210ENST00000481508 STAT5AP42229 794 aa10.12□□□□□ -0.79
SSBP1-210ENST00000481508 SLC6A12P48065 614 aa10.12□□□□□ -0.79
SSBP1-210ENST00000481508 HSPA7P48741 367 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms