RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 MLLT10P55197 1068 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 TBPL1P62380 186 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 MPP1Q00013 466 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 KLC1Q07866 573 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 CALCOCO2Q13137 446 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 CUL1Q13616 776 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 ELOAQ14241 798 aaKnown RBP10.91□□□□□ -0.66
CCM2-213ENST00000480658 FASTKQ14296 549 aaKnown RBP10.91□□□□□ -0.66
CCM2-213ENST00000480658 NADK2Q4G0N4 442 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 CRB2Q5IJ48 1285 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 FRMPD2BQ6IN97 320 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 ZNF549Q6P9A3 640 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 SUSD1Q6UWL2 747 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 MAATS1Q7Z4T9 603 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 FAM20CQ8IXL6 584 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 KBTBD2Q8IY47 623 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 GIMAP7Q8NHV1 300 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 STT3BQ8TCJ2 826 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 METTL21AQ8WXB1 218 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 CDKL2Q92772 493 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 OR2A5Q96R48 311 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 WDR77Q9BQA1 342 aaPredicted RBP10.91□□□□□ -0.66
CCM2-213ENST00000480658 SLC6A20Q9NP91 592 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 SLC22A11Q9NSA0 550 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 RIC8BQ9NVN3 520 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 TRMT1Q9NXH9 659 aaKnown RBP10.91□□□□□ -0.66
CCM2-213ENST00000480658 TRPC4Q9UBN4 977 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 CTSFQ9UBX1 484 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 TEKT2Q9UIF3 430 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 TSR3Q9UJK0 312 aaKnown RBP10.91□□□□□ -0.66
CCM2-213ENST00000480658 C3orf18Q9UK00 162 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 PLAAQ9Y263 795 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 RUVBL1Q9Y265 456 aaKnown RBP10.91□□□□□ -0.66
CCM2-213ENST00000480658 HS3ST3B1Q9Y662 390 aa10.91□□□□□ -0.66
CCM2-213ENST00000480658 NSG1A0A0A6YYJ2 146 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 CLEC18AA5D8T8 446 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 SYNDIG1LA6NDD5 238 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 URADA6NGE7 173 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 K7EM74 188 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 CDK2AP1O14519 115 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 SOCS6O14544 535 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 NSA2O95478 260 aaKnown RBP10.9□□□□□ -0.66
CCM2-213ENST00000480658 UQCRHP07919 91 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 MCM3P25205 808 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 SLC26A3P40879 764 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 OR1D4P47884 311 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 HNMTP50135 292 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 TLR1Q15399 786 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 INPP5JQ15735 1006 aaPredicted RBP10.9□□□□□ -0.66
CCM2-213ENST00000480658 IGFBP7Q16270 282 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 INAQ16352 499 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 BBS9Q3SYG4 887 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 DUPD1Q68J44 220 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 FBXO42Q6P3S6 717 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 LCTLQ6UWM7 567 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 IGFL2Q6UWQ7 119 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 CLEC18BQ6UXF7 455 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 COX15Q7KZN9 410 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 NDUFAF7Q7L592 441 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 PIWIL4Q7Z3Z4 852 aaKnown RBP10.9□□□□□ -0.66
CCM2-213ENST00000480658 NKAPQ8N5F7 415 aaKnown RBP10.9□□□□□ -0.66
CCM2-213ENST00000480658 CLEC18CQ8NCF0 446 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 OR11G2Q8NGC1 345 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 MMABQ96EY8 250 aaPredicted RBP10.9□□□□□ -0.66
CCM2-213ENST00000480658 LINGO1Q96FE5 620 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 PDLIM5Q96HC4 596 aaKnown RBP10.9□□□□□ -0.66
CCM2-213ENST00000480658 C10orf90Q96M02 699 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 LMF1Q96S06 567 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 PHACTR1Q9C0D0 580 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 SOX17Q9H6I2 414 aaPredicted RBP10.9□□□□□ -0.66
CCM2-213ENST00000480658 ZNF552Q9H707 407 aaPredicted RBP10.9□□□□□ -0.66
CCM2-213ENST00000480658 POPDC3Q9HBV1 291 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 ARL15Q9NXU5 204 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 STOX2Q9P2F5 926 aaPredicted RBP10.9□□□□□ -0.66
CCM2-213ENST00000480658 TXNDC16Q9P2K2 825 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 NOVA2Q9UNW9 492 aaKnown RBP10.9□□□□□ -0.66
CCM2-213ENST00000480658 MED16Q9Y2X0 877 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 PCM1Q15154 2024 aa10.9□□□□□ -0.66
CCM2-213ENST00000480658 NUP210LQ5VU65 1888 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 LOC105369274A0A096LPK9 316 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 IGKV1-8A0A0C4DH67 115 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 LOC102723532A0A0G2JNH3 316 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 DYTNA2CJ06 578 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 IDSB3KWA1 339 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 PYCARD-AS1I3L0S3 204 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 EIF3HO15372 352 aaKnown RBP eCLIP10.89□□□□□ -0.67
CCM2-213ENST00000480658 CNOT3O75175 753 aaKnown RBP10.89□□□□□ -0.67
CCM2-213ENST00000480658 SEC31AO94979 1220 aaKnown RBP10.89□□□□□ -0.67
CCM2-213ENST00000480658 ZIC2O95409 532 aaPredicted RBP10.89□□□□□ -0.67
CCM2-213ENST00000480658 DDAH2O95865 285 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 HEXBP07686 556 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 GSTM2P28161 218 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 AGTR2P50052 363 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 CCR8P51685 355 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 EMP2P54851 167 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 CBLBQ13191 982 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 HERC3Q15034 1050 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 COLEC12Q5KU26 742 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 STEAP4Q687X5 459 aa10.89□□□□□ -0.67
CCM2-213ENST00000480658 HIBCHQ6NVY1 386 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms