RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 MYH14Q7Z406 1995 aaKnown RBP4.38□□□□□ -1.71
CALD1-219ENST00000480638 KPNA7A9QM74 516 aa4.38□□□□□ -1.71
CALD1-219ENST00000480638 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.38□□□□□ -1.71
CALD1-219ENST00000480638 ERCC2P18074 760 aa4.38□□□□□ -1.71
CALD1-219ENST00000480638 RPL35AP18077 110 aaKnown RBP4.38□□□□□ -1.71
CALD1-219ENST00000480638 HLA-FP30511 346 aa4.38□□□□□ -1.71
CALD1-219ENST00000480638 XGP55808 180 aa4.38□□□□□ -1.71
CALD1-219ENST00000480638 KRTAP10-5P60370 271 aa4.38□□□□□ -1.71
CALD1-219ENST00000480638 CYCSP99999 105 aaKnown RBP4.38□□□□□ -1.71
CALD1-219ENST00000480638 TRIM29Q14134 588 aa4.38□□□□□ -1.71
CALD1-219ENST00000480638 NONOQ15233 471 aaKnown RBP eCLIP4.38□□□□□ -1.71
CALD1-219ENST00000480638 CHST3Q7LGC8 479 aa4.38□□□□□ -1.71
CALD1-219ENST00000480638 CATSPERDQ86XM0 798 aa4.38□□□□□ -1.71
CALD1-219ENST00000480638 PIK3R3Q92569 461 aa4.38□□□□□ -1.71
CALD1-219ENST00000480638 EXT2Q93063 718 aa4.38□□□□□ -1.71
CALD1-219ENST00000480638 SPATA33Q96N06 139 aa4.38□□□□□ -1.71
CALD1-219ENST00000480638 ZNF300Q96RE9 604 aaPredicted RBP4.38□□□□□ -1.71
CALD1-219ENST00000480638 SERINC2Q96SA4 455 aa4.38□□□□□ -1.71
CALD1-219ENST00000480638 NAA11Q9BSU3 229 aaPredicted RBP4.38□□□□□ -1.71
CALD1-219ENST00000480638 NYXQ9GZU5 481 aa4.38□□□□□ -1.71
CALD1-219ENST00000480638 UPF3AQ9H1J1 476 aaKnown RBP4.38□□□□□ -1.71
CALD1-219ENST00000480638 LIPGQ9Y5X9 500 aa4.38□□□□□ -1.71
CALD1-219ENST00000480638 CCDC175P0C221 793 aa4.37□□□□□ -1.71
CALD1-219ENST00000480638 UGT1A4P22310 534 aa4.37□□□□□ -1.71
CALD1-219ENST00000480638 HNF4AP41235 474 aa4.37□□□□□ -1.71
CALD1-219ENST00000480638 RAD23AP54725 363 aa4.37□□□□□ -1.71
CALD1-219ENST00000480638 MZT1Q08AG7 82 aa4.37□□□□□ -1.71
CALD1-219ENST00000480638 ILF2Q12905 390 aaKnown RBP4.37□□□□□ -1.71
CALD1-219ENST00000480638 CAMK2DQ13557 499 aa4.37□□□□□ -1.71
CALD1-219ENST00000480638 NECTIN1Q15223 517 aa4.37□□□□□ -1.71
CALD1-219ENST00000480638 HYAL4Q2M3T9 481 aa4.37□□□□□ -1.71
CALD1-219ENST00000480638 LACTB2Q53H82 288 aaPredicted RBP4.37□□□□□ -1.71
CALD1-219ENST00000480638 C2CD6Q53TS8 623 aa4.37□□□□□ -1.71
CALD1-219ENST00000480638 DOK6Q6PKX4 331 aa4.37□□□□□ -1.71
CALD1-219ENST00000480638 TSACCQ96A04 125 aaPredicted RBP4.37□□□□□ -1.71
CALD1-219ENST00000480638 RMDN2Q96LZ7 410 aa4.37□□□□□ -1.71
CALD1-219ENST00000480638 XAB2Q9HCS7 855 aaKnown RBP4.37□□□□□ -1.71
CALD1-219ENST00000480638 CCDC177Q9NQR7 707 aaPredicted RBP4.37□□□□□ -1.71
CALD1-219ENST00000480638 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.37□□□□□ -1.71
CALD1-219ENST00000480638 CSNK1G3Q9Y6M4 447 aa4.37□□□□□ -1.71
CALD1-219ENST00000480638 E9PQ18 207 aa4.36□□□□□ -1.71
CALD1-219ENST00000480638 IGHEP01854 428 aa4.36□□□□□ -1.71
CALD1-219ENST00000480638 PRKAR1AP10644 381 aa4.36□□□□□ -1.71
CALD1-219ENST00000480638 PRKACGP22612 351 aa4.36□□□□□ -1.71
CALD1-219ENST00000480638 HSD17B3P37058 310 aa4.36□□□□□ -1.71
CALD1-219ENST00000480638 CDH18Q13634 790 aa4.36□□□□□ -1.71
CALD1-219ENST00000480638 KCTD2Q14681 263 aa4.36□□□□□ -1.71
CALD1-219ENST00000480638 MTF1Q14872 753 aa4.36□□□□□ -1.71
CALD1-219ENST00000480638 OPCMLQ14982 345 aa4.36□□□□□ -1.71
CALD1-219ENST00000480638 TMEM132DQ14C87 1099 aa4.36□□□□□ -1.71
CALD1-219ENST00000480638 PTGISQ16647 500 aa4.36□□□□□ -1.71
CALD1-219ENST00000480638 CTR9Q6PD62 1173 aa4.36□□□□□ -1.71
CALD1-219ENST00000480638 PPP1R21Q6ZMI0 780 aa4.36□□□□□ -1.71
CALD1-219ENST00000480638 CNDP2Q96KP4 475 aaKnown RBP4.36□□□□□ -1.71
CALD1-219ENST00000480638 KLHL5Q96PQ7 755 aa4.36□□□□□ -1.71
CALD1-219ENST00000480638 FAM129AQ9BZQ8 928 aa4.36□□□□□ -1.71
CALD1-219ENST00000480638 OR10A4Q9H209 315 aa4.36□□□□□ -1.71
CALD1-219ENST00000480638 FN3KQ9H479 309 aa4.36□□□□□ -1.71
CALD1-219ENST00000480638 ACTL8Q9H568 366 aa4.36□□□□□ -1.71
CALD1-219ENST00000480638 MED20Q9H944 212 aa4.36□□□□□ -1.71
CALD1-219ENST00000480638 TEX10Q9NXF1 929 aaPredicted RBP4.36□□□□□ -1.71
CALD1-219ENST00000480638 NFKBIL1Q9UBC1 381 aaPredicted RBP4.36□□□□□ -1.71
CALD1-219ENST00000480638 POLLQ9UGP5 575 aa4.36□□□□□ -1.71
CALD1-219ENST00000480638 MMP24Q9Y5R2 645 aa4.36□□□□□ -1.71
CALD1-219ENST00000480638 IGSF1Q8N6C5 1336 aa4.36□□□□□ -1.71
CALD1-219ENST00000480638 IGKV3D-20A0A0C4DH25 116 aa4.35□□□□□ -1.71
CALD1-219ENST00000480638 MPTX1A8MV57 137 aa4.35□□□□□ -1.71
CALD1-219ENST00000480638 RECQL5O94762 991 aaPredicted RBP4.35□□□□□ -1.71
CALD1-219ENST00000480638 MYL6BP14649 208 aa4.35□□□□□ -1.71
CALD1-219ENST00000480638 ACAT1P24752 427 aaKnown RBP4.35□□□□□ -1.71
CALD1-219ENST00000480638 ALDH1B1P30837 517 aa4.35□□□□□ -1.71
CALD1-219ENST00000480638 TSFMP43897 325 aaKnown RBP4.35□□□□□ -1.71
CALD1-219ENST00000480638 OR3A2P47893 321 aa4.35□□□□□ -1.71
CALD1-219ENST00000480638 CALCOCO2Q13137 446 aa4.35□□□□□ -1.71
CALD1-219ENST00000480638 PTPN14Q15678 1187 aa4.35□□□□□ -1.71
CALD1-219ENST00000480638 TAB1Q15750 504 aa4.35□□□□□ -1.71
CALD1-219ENST00000480638 ENPP7Q6UWV6 458 aa4.35□□□□□ -1.71
CALD1-219ENST00000480638 KIF6Q6ZMV9 814 aa4.35□□□□□ -1.71
CALD1-219ENST00000480638 FCRLAQ7L513 359 aa4.35□□□□□ -1.71
CALD1-219ENST00000480638 CCDC186Q7Z3E2 898 aa4.35□□□□□ -1.71
CALD1-219ENST00000480638 FAM89BQ8N5H3 189 aa4.35□□□□□ -1.71
CALD1-219ENST00000480638 PRSS33Q8NF86 280 aa4.35□□□□□ -1.71
CALD1-219ENST00000480638 METTL21AQ8WXB1 218 aa4.35□□□□□ -1.71
CALD1-219ENST00000480638 TDRD1Q9BXT4 1180 aaKnown RBP4.35□□□□□ -1.71
CALD1-219ENST00000480638 UBXN6Q9BZV1 441 aa4.35□□□□□ -1.71
CALD1-219ENST00000480638 TERF2IPQ9NYB0 399 aa4.35□□□□□ -1.71
CALD1-219ENST00000480638 PRDM4Q9UKN5 801 aa4.35□□□□□ -1.71
CALD1-219ENST00000480638 TRBV4-1A0A0J9YWV2 114 aa4.34□□□□□ -1.71
CALD1-219ENST00000480638 ERI2A8K979 691 aaKnown RBP4.34□□□□□ -1.71
CALD1-219ENST00000480638 CCDC188H7C350 402 aa4.34□□□□□ -1.71
CALD1-219ENST00000480638 PENKP01210 267 aaPredicted RBP4.34□□□□□ -1.71
CALD1-219ENST00000480638 SERPING1P05155 500 aa4.34□□□□□ -1.71
CALD1-219ENST00000480638 SP100P23497 879 aaPredicted RBP4.34□□□□□ -1.71
CALD1-219ENST00000480638 CDC25CP30307 473 aa4.34□□□□□ -1.71
CALD1-219ENST00000480638 SOX3P41225 446 aa4.34□□□□□ -1.71
CALD1-219ENST00000480638 MTCP1P56278 107 aa4.34□□□□□ -1.71
CALD1-219ENST00000480638 IRX4P78413 519 aa4.34□□□□□ -1.71
CALD1-219ENST00000480638 SRSF9Q13242 221 aaKnown RBP eCLIP4.34□□□□□ -1.71
CALD1-219ENST00000480638 SGCGQ13326 291 aa4.34□□□□□ -1.71
CALD1-219ENST00000480638 FASTKD3Q14CZ7 662 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms