RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 KRT78Q8N1N4 520 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 OR4K1Q8NGD4 311 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 WDR20Q8TBZ3 569 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 SELENOMQ8WWX9 145 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 USP7Q93009 1102 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 MAELQ96JY0 434 aaKnown RBP16.91■□□□□ 0.3
UPF3A-206ENST00000480362 FRG2BQ96QU4 278 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 HBEGFQ99075 208 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 CCT7Q99832 543 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 AIF1LQ9BQI0 150 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 DPH7Q9BTV6 452 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 SPNS1Q9H2V7 528 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 TCF7L2Q9NQB0 619 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 TMEM184CQ9NVA4 438 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 HEY2Q9UBP5 337 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 KLHL20Q9Y2M5 609 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 PCDHGA11Q9Y5H2 935 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 ATP6AP2A0A1C7CYW4 349 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 ATP6AP2O75787 350 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 ZNF806P0C7X5 589 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 PCNAP12004 261 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 HRH2P25021 359 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 EPHA4P54764 986 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 CSNK1G2P78368 415 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 RBBP5Q15291 538 aaKnown RBP16.9■□□□□ 0.3
UPF3A-206ENST00000480362 NR0B2Q15466 257 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 SLC5A12Q1EHB4 618 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 LSM12Q3MHD2 195 aaKnown RBP16.9■□□□□ 0.3
UPF3A-206ENST00000480362 XKR7Q5GH72 579 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 NXNQ6DKJ4 435 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 SPESP1Q6UW49 350 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 RNF165Q6ZSG1 346 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 ADCK2Q7Z695 626 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 TRIM73Q86UV7 250 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 LAS2Q8IYD9 372 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 FAM181AQ8N9Y4 354 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 ZNF740Q8NDX6 193 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 OR7G3Q8NG95 312 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 ACTRT2Q8TDY3 377 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 STON2Q8WXE9 905 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 ATOH1Q92858 354 aaPredicted RBP16.9■□□□□ 0.3
UPF3A-206ENST00000480362 UBE2E3Q969T4 207 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 REPS1Q96D71 796 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 PLCD4Q9BRC7 762 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 CCDC28BQ9BUN5 200 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 SNX7Q9UNH6 387 aa16.9■□□□□ 0.3
UPF3A-206ENST00000480362 LNP1A1A4G5 178 aa16.89■□□□□ 0.29
UPF3A-206ENST00000480362 SLC28A1O00337 649 aa16.89■□□□□ 0.29
UPF3A-206ENST00000480362 VPS4BO75351 444 aa16.89■□□□□ 0.29
UPF3A-206ENST00000480362 ZNF883P0CG24 379 aa16.89■□□□□ 0.29
UPF3A-206ENST00000480362 GRIA3P42263 894 aa16.89■□□□□ 0.29
UPF3A-206ENST00000480362 PPM1FP49593 454 aaPredicted RBP16.89■□□□□ 0.29
UPF3A-206ENST00000480362 OR1D5P58170 312 aa16.89■□□□□ 0.29
UPF3A-206ENST00000480362 REEP5Q00765 189 aa16.89■□□□□ 0.29
UPF3A-206ENST00000480362 SUZ12Q15022 739 aaKnown RBP16.89■□□□□ 0.29
UPF3A-206ENST00000480362 SF3A2Q15428 464 aaKnown RBP16.89■□□□□ 0.29
UPF3A-206ENST00000480362 TMIGD1Q6UXZ0 262 aa16.89■□□□□ 0.29
UPF3A-206ENST00000480362 Q6ZSR9 355 aa16.89■□□□□ 0.29
UPF3A-206ENST00000480362 LARP4Q71RC2 724 aaKnown RBP eCLIP16.89■□□□□ 0.29
UPF3A-206ENST00000480362 TRIM46Q7Z4K8 759 aa16.89■□□□□ 0.29
UPF3A-206ENST00000480362 ZNF438Q7Z4V0 828 aa16.89■□□□□ 0.29
UPF3A-206ENST00000480362 ALYREFQ86V81 257 aaKnown RBP16.89■□□□□ 0.29
UPF3A-206ENST00000480362 OR2T11Q8NH01 316 aa16.89■□□□□ 0.29
UPF3A-206ENST00000480362 CEP70Q8NHQ1 597 aa16.89■□□□□ 0.29
UPF3A-206ENST00000480362 TUBGCP3Q96CW5 907 aa16.89■□□□□ 0.29
UPF3A-206ENST00000480362 ABCG4Q9H172 646 aa16.89■□□□□ 0.29
UPF3A-206ENST00000480362 NT5DC2Q9H857 520 aa16.89■□□□□ 0.29
UPF3A-206ENST00000480362 AKTIPQ9H8T0 292 aa16.89■□□□□ 0.29
UPF3A-206ENST00000480362 LY6G6EA0A0G2JKS1 128 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 FEZF1A0PJY2 475 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 SERTM1A2A2V5 107 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 B4GAT1O43505 415 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 RGS14O43566 566 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 FKBP9O95302 570 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 GPR3P46089 330 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 CAPZBP47756 277 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 LSSP48449 732 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 PPP1CAP62136 330 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 ZNF33BQ06732 778 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 DDX39BQ13838 428 aaKnown RBP16.88■□□□□ 0.29
UPF3A-206ENST00000480362 NR1D2Q14995 579 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 ADNP2Q6IQ32 1131 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 ZNF425Q6IV72 752 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 RNF175Q8N4F7 328 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 Q8N9G6 341 aaPredicted RBP16.88■□□□□ 0.29
UPF3A-206ENST00000480362 OR6C4Q8NGE1 309 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 HUS1BQ8NHY5 278 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 CCDC74AQ96AQ1 378 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 AHCYL2Q96HN2 611 aaKnown RBP16.88■□□□□ 0.29
UPF3A-206ENST00000480362 PPM1MQ96MI6 270 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 MTERF1Q99551 399 aaKnown RBP16.88■□□□□ 0.29
UPF3A-206ENST00000480362 PITHD1Q9GZP4 211 aaPredicted RBP16.88■□□□□ 0.29
UPF3A-206ENST00000480362 IRF2BPLQ9H1B7 796 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 PRM3Q9NNZ6 103 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 RIC8BQ9NVN3 520 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 DNAAF2Q9NVR5 837 aaKnown RBP16.88■□□□□ 0.29
UPF3A-206ENST00000480362 GIMAP2Q9UG22 337 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 POMT2Q9UKY4 750 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 CCL27Q9Y4X3 112 aa16.88■□□□□ 0.29
UPF3A-206ENST00000480362 PCDHGB2Q9Y5G2 931 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms