RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 MINDY1Q8N5J2 469 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 BPIFB1Q8TDL5 484 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 WDR83Q9BRX9 315 aaKnown RBP13.93□□□□□ -0.18
COL20A1-206ENST00000479501 SPHK2Q9NRA0 654 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 FZD4Q9ULV1 537 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 OARD1Q9Y530 152 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 UBR3Q6ZT12 1888 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 SCAMP1O15126 338 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 HTRA2O43464 458 aaPredicted RBP13.93□□□□□ -0.18
COL20A1-206ENST00000479501 MMP20O60882 483 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 IFNA16P05015 189 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 RB1P06400 928 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 PABPC4LP0CB38 370 aaKnown RBP13.93□□□□□ -0.18
COL20A1-206ENST00000479501 CDKN1CP49918 316 aaPredicted RBP13.93□□□□□ -0.18
COL20A1-206ENST00000479501 PSMD4P55036 377 aaKnown RBP13.93□□□□□ -0.18
COL20A1-206ENST00000479501 SEMA3BQ13214 749 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 SLC9A5Q14940 896 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 DUOXA1Q1HG43 343 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 NEK5Q6P3R8 708 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 ZZZ3Q8IYH5 903 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 GPR150Q8NGU9 434 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 OLIG1Q8TAK6 271 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 ARRDC2Q8TBH0 407 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 LCN9Q8WX39 176 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 SLC45A3Q96JT2 553 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 GSTO2Q9H4Y5 243 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 OSER1Q9NX31 292 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 NKIRAS2Q9NYR9 191 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 LOC285095A0A1B0GVY8 99 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 AP2A2O94973 939 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 CMPK1P30085 196 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 TMEM115Q12893 351 aaPredicted RBP13.93□□□□□ -0.18
COL20A1-206ENST00000479501 DCST1Q5T197 706 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 OR13J1Q8NGT2 312 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 OTUB2Q96DC9 234 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 ZBED6CLQ96FA7 236 aaPredicted RBP13.93□□□□□ -0.18
COL20A1-206ENST00000479501 AHCYL2Q96HN2 611 aaKnown RBP13.93□□□□□ -0.18
COL20A1-206ENST00000479501 IL17CQ9P0M4 197 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 TRPS1Q9UHF7 1281 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 POU2F1P14859 743 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 TUBA4AP68366 448 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 DSC3Q14574 896 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 CYP4V2Q6ZWL3 525 aaPredicted RBP13.93□□□□□ -0.18
COL20A1-206ENST00000479501 SMYD1Q8NB12 490 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 TFGQ92734 400 aaPredicted RBP13.93□□□□□ -0.18
COL20A1-206ENST00000479501 CCM2LQ9NUG4 571 aaPredicted RBP13.93□□□□□ -0.18
COL20A1-206ENST00000479501 PCDHGB3Q9Y5G1 929 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 PRSS51A0A1B0GVH4 220 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 PRORSD1PA6NEY8 169 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 H7C0S8 307 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 VIPP01282 170 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 RHOP08100 348 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 PRG2P13727 222 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 OR2T5Q6IEZ7 315 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 GPR153Q6NV75 609 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 TNFAIP8L2Q6P589 184 aaPredicted RBP13.92□□□□□ -0.18
COL20A1-206ENST00000479501 HACD2Q6Y1H2 254 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 KBTBD6Q86V97 674 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 MINDY2Q8NBR6 621 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 OR2T29Q8NH02 315 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 RASSF5Q8WWW0 418 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 YTHDF1Q9BYJ9 559 aaKnown RBP13.92□□□□□ -0.18
COL20A1-206ENST00000479501 TPT1P8Q9HAU6 139 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 SOHLH2Q9NX45 425 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 PCTPQ9UKL6 214 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 OR10H1Q9Y4A9 318 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 PCDHGA10Q9Y5H3 936 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 EDDM13A0A1B0GTR0 161 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 HHLA1C9JL84 531 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 PENKP01210 267 aaPredicted RBP13.92□□□□□ -0.18
COL20A1-206ENST00000479501 ACP5P13686 325 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 KCNA5P22460 613 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 SLC6A4P31645 630 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 MBOAT1Q6ZNC8 495 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 FAM92BQ6ZTR7 304 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 CMTR2Q8IYT2 770 aaKnown RBP13.92□□□□□ -0.18
COL20A1-206ENST00000479501 GTPBP3Q969Y2 492 aaKnown RBP13.92□□□□□ -0.18
COL20A1-206ENST00000479501 KATNBL1Q9H079 304 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 WDR26Q9H7D7 661 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 FAM120CQ9NX05 1096 aaKnown RBP13.92□□□□□ -0.18
COL20A1-206ENST00000479501 FBXW2Q9UKT8 454 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 SLC22A1O15245 554 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 TP73O15350 636 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 PDPK1O15530 556 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 NUDT14O95848 222 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 BPIP17213 487 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 ETV3P41162 512 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 DSC1Q08554 894 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 MOGQ16653 247 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 PIANPQ8IYJ0 282 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 OR10Q1Q8NGQ4 319 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 TMCO6Q96DC7 493 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 CASD1Q96PB1 797 aa13.92□□□□□ -0.18
COL20A1-206ENST00000479501 A0A0G2JN53 185 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 EFCAB9A8MZ26 197 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 FGF4P08620 206 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 HLA-EP13747 358 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 PTX3P26022 381 aaPredicted RBP13.91□□□□□ -0.18
COL20A1-206ENST00000479501 HSD17B2P37059 387 aa13.91□□□□□ -0.18
COL20A1-206ENST00000479501 SEC13P55735 322 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms