RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 LRCH2Q5VUJ6 765 aa4.68□□□□□ -1.66
RFC4-212ENST00000479307 CAPRIN2Q6IMN6 1127 aaKnown RBP4.68□□□□□ -1.66
RFC4-212ENST00000479307 C9orf106Q8NAJ2 232 aa4.68□□□□□ -1.66
RFC4-212ENST00000479307 ZBTB8BQ8NAP8 495 aaPredicted RBP4.68□□□□□ -1.66
RFC4-212ENST00000479307 GPRC5AQ8NFJ5 357 aa4.68□□□□□ -1.66
RFC4-212ENST00000479307 DAZLQ92904 295 aaKnown RBP4.68□□□□□ -1.66
RFC4-212ENST00000479307 RAB3IPQ96QF0 476 aaPredicted RBP4.68□□□□□ -1.66
RFC4-212ENST00000479307 BTBD10Q9BSF8 475 aa4.68□□□□□ -1.66
RFC4-212ENST00000479307 POLR3CQ9BUI4 534 aaPredicted RBP4.68□□□□□ -1.66
RFC4-212ENST00000479307 ABHD6Q9BV23 337 aa4.68□□□□□ -1.66
RFC4-212ENST00000479307 OPA3Q9H6K4 179 aa4.68□□□□□ -1.66
RFC4-212ENST00000479307 CNOT10Q9H9A5 744 aaKnown RBP4.68□□□□□ -1.66
RFC4-212ENST00000479307 TRPC7Q9HCX4 862 aa4.68□□□□□ -1.66
RFC4-212ENST00000479307 PFDN4Q9NQP4 134 aa4.68□□□□□ -1.66
RFC4-212ENST00000479307 ABCF3Q9NUQ8 709 aa4.68□□□□□ -1.66
RFC4-212ENST00000479307 CWC25Q9NXE8 425 aaPredicted RBP4.68□□□□□ -1.66
RFC4-212ENST00000479307 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.68□□□□□ -1.663e-6■□□□□ 9.4
RFC4-212ENST00000479307 SPIN1Q9Y657 262 aaPredicted RBP4.68□□□□□ -1.66
RFC4-212ENST00000479307 MROH7Q68CQ1 1323 aa4.68□□□□□ -1.66
RFC4-212ENST00000479307 CEP250Q9BV73 2442 aa4.67□□□□□ -1.66
RFC4-212ENST00000479307 LOC400499M0QZD8 3231 aa4.67□□□□□ -1.66
RFC4-212ENST00000479307 FLNBO75369 2602 aaKnown RBP4.67□□□□□ -1.66
RFC4-212ENST00000479307 TEX13DA0A0J9YY54 714 aaPredicted RBP4.67□□□□□ -1.66
RFC4-212ENST00000479307 TMEM221A6NGB7 291 aa4.67□□□□□ -1.66
RFC4-212ENST00000479307 PRAC2D3DTV9 90 aa4.67□□□□□ -1.66
RFC4-212ENST00000479307 M0R296 226 aa4.67□□□□□ -1.66
RFC4-212ENST00000479307 OR10H2O60403 315 aa4.67□□□□□ -1.66
RFC4-212ENST00000479307 TBCAO75347 108 aaKnown RBP4.67□□□□□ -1.66
RFC4-212ENST00000479307 TADA2AO75478 443 aa4.67□□□□□ -1.66
RFC4-212ENST00000479307 C22orf31O95567 290 aa4.67□□□□□ -1.66
RFC4-212ENST00000479307 KRT19P08727 400 aa4.67□□□□□ -1.66
RFC4-212ENST00000479307 TGFB3P10600 412 aa4.67□□□□□ -1.66
RFC4-212ENST00000479307 LIMK1P53667 647 aa4.67□□□□□ -1.66
RFC4-212ENST00000479307 RPL24P83731 157 aaKnown RBP4.67□□□□□ -1.66
RFC4-212ENST00000479307 TFCP2Q12800 502 aa4.67□□□□□ -1.66
RFC4-212ENST00000479307 ILF3Q12906 894 aaKnown RBP eCLIP4.67□□□□□ -1.66
RFC4-212ENST00000479307 MFAP5Q13361 173 aa4.67□□□□□ -1.66
RFC4-212ENST00000479307 GRB14Q14449 540 aa4.67□□□□□ -1.66
RFC4-212ENST00000479307 METTL27Q8N6F8 245 aaPredicted RBP4.67□□□□□ -1.66
RFC4-212ENST00000479307 PI4KAP1Q8N8J0 262 aa4.67□□□□□ -1.66
RFC4-212ENST00000479307 SPDL1Q96EA4 605 aa4.67□□□□□ -1.66
RFC4-212ENST00000479307 SCRN2Q96FV2 425 aa4.67□□□□□ -1.66
RFC4-212ENST00000479307 LINC00615Q96LM1 132 aaPredicted RBP4.67□□□□□ -1.66
RFC4-212ENST00000479307 LRRC3BQ96PB8 259 aa4.67□□□□□ -1.66
RFC4-212ENST00000479307 NUP85Q9BW27 656 aa4.67□□□□□ -1.66
RFC4-212ENST00000479307 UPF3BQ9BZI7 483 aaKnown RBP4.67□□□□□ -1.66
RFC4-212ENST00000479307 LRRC4Q9HBW1 653 aa4.67□□□□□ -1.66
RFC4-212ENST00000479307 MBNL1Q9NR56 388 aaKnown RBP4.67□□□□□ -1.66
RFC4-212ENST00000479307 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.67□□□□□ -1.66
RFC4-212ENST00000479307 MUTYHQ9UIF7 546 aa4.67□□□□□ -1.66
RFC4-212ENST00000479307 ANAPC5Q9UJX4 755 aa4.67□□□□□ -1.66
RFC4-212ENST00000479307 FRYQ5TBA9 3013 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 IGLV5-45A0A087WSX0 123 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 A0A1B0GUV1 79 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 A0A1W2PPI3 338 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 A0A1W2PRQ8 180 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 SLC15A5A6NIM6 579 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 TSPY2A6NKD2 308 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 CCDC188H7C350 402 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 SPRY1O43609 319 aaPredicted RBP4.66□□□□□ -1.66
RFC4-212ENST00000479307 BAG4O95429 457 aaKnown RBP4.66□□□□□ -1.66
RFC4-212ENST00000479307 IGHV4-39P01824 125 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 HOXB7P09629 217 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 RAB40ALP0C0E4 278 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 TSPY3P0CV98 308 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 TSPY8P0CW00 308 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 SCG2P13521 617 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 DGKAP23743 735 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 EEF1B2P24534 225 aaKnown RBP4.66□□□□□ -1.66
RFC4-212ENST00000479307 SLC6A6P31641 620 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 ZNF132P52740 706 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 HMGCS2P54868 508 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 VCPP55072 806 aaKnown RBP4.66□□□□□ -1.66
RFC4-212ENST00000479307 RPS18P62269 152 aaKnown RBP4.66□□□□□ -1.66
RFC4-212ENST00000479307 IRX3P78415 501 aaPredicted RBP4.66□□□□□ -1.66
RFC4-212ENST00000479307 TSPY1Q01534 308 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 KIR2DS3Q14952 304 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 VWC2Q2TAL6 325 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 ACCSLQ4AC99 568 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 SIRPB2Q5JXA9 342 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 STXBP5Q5T5C0 1151 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 PLA2G4FQ68DD2 849 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 KRT39Q6A163 491 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 WBP2NLQ6ICG8 309 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 FOXL2NBQ6ZUU3 175 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 KCTD8Q6ZWB6 473 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 TMPRSS11FQ6ZWK6 438 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 ERN2Q76MJ5 926 aaKnown RBP4.66□□□□□ -1.66
RFC4-212ENST00000479307 MEPCEQ7L2J0 689 aaKnown RBP4.66□□□□□ -1.66
RFC4-212ENST00000479307 DET1Q7L5Y6 550 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 PIWIL4Q7Z3Z4 852 aaKnown RBP4.66□□□□□ -1.66
RFC4-212ENST00000479307 VSIG1Q86XK7 387 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 MFN1Q8IWA4 741 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 CPSF7Q8N684 471 aaKnown RBP4.66□□□□□ -1.66
RFC4-212ENST00000479307 NKAIN3Q8N8D7 197 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 LMO3Q8TAP4 145 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 ARNTL2Q8WYA1 636 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 MRPS27Q92552 414 aaKnown RBP4.66□□□□□ -1.66
RFC4-212ENST00000479307 SFXN2Q96NB2 322 aa4.66□□□□□ -1.66
RFC4-212ENST00000479307 NAA11Q9BSU3 229 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms