RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 OR4D1Q15615 310 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 ARHGAP22Q7Z5H3 698 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 SLCO6A1Q86UG4 719 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 TRAM1L1Q8N609 369 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 CHST14Q8NCH0 376 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 PIGXQ8TBF5 258 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 ZNF347Q96SE7 839 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 GPATCH1Q9BRR8 931 aaKnown RBP13.8□□□□□ -0.2
NPHP4-208ENST00000478423 CD320Q9NPF0 282 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 SMAD6O43541 496 aaKnown RBP13.8□□□□□ -0.2
NPHP4-208ENST00000478423 ANXA8P13928 327 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 ETV4P43268 484 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 ATP12AP54707 1039 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 TARDBPQ13148 414 aaKnown RBP eCLIP13.8□□□□□ -0.22e-6■■■■■ 28.6
NPHP4-208ENST00000478423 SLC8B1Q6J4K2 584 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 MZT2AQ6P582 158 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 C11orf88Q6PI97 169 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 KDELC1Q6UW63 502 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 SLC7A6OSQ96CW6 309 aaPredicted RBP13.8□□□□□ -0.2
NPHP4-208ENST00000478423 CLSTN3Q9BQT9 956 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 BOCQ9BWV1 1114 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 TRIM8Q9BZR9 551 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 SFXN1Q9H9B4 322 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 C11orf16Q9NQ32 467 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 FAM189A1O60320 539 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 DIRAS1O95057 198 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 SRCP12931 536 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 SPINT3P49223 89 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 PDCD4Q53EL6 469 aaKnown RBP13.8□□□□□ -0.2
NPHP4-208ENST00000478423 EOGTQ5NDL2 527 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 ANKRD26P1Q6NSI1 321 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 KLHDC10Q6PID8 442 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 NPAS3Q8IXF0 933 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 SCAIQ8N9R8 606 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 BIRC7Q96CA5 298 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 P2RY13Q9BPV8 354 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 MTG2Q9H4K7 406 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 IL17CQ9P0M4 197 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 DNAJC15Q9Y5T4 150 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 DGKBQ9Y6T7 804 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 CREG1O75629 220 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 SRPRAP08240 638 aaKnown RBP13.8□□□□□ -0.2
NPHP4-208ENST00000478423 SUZ12Q15022 739 aaKnown RBP13.8□□□□□ -0.2
NPHP4-208ENST00000478423 KIAA0319Q5VV43 1072 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 OR2T5Q6IEZ7 315 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 NANOGP8Q6NSW7 305 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 NOXRED1Q6NXP6 359 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 RANBP3LQ86VV4 465 aaPredicted RBP13.8□□□□□ -0.2
NPHP4-208ENST00000478423 TMC8Q8IU68 726 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 OR2T29Q8NH02 315 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 C5orf34Q96MH7 638 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 NANOGQ9H9S0 305 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 PCDHGA4Q9Y5G9 962 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 A0A1B0GUL6 1792 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 LTBP4Q8N2S1 1624 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 PRORSD1PA6NEY8 169 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 ASNA1O43681 348 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 CDKN1CP49918 316 aaPredicted RBP13.79□□□□□ -0.2
NPHP4-208ENST00000478423 CEACAM20Q6UY09 585 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 SATL1Q86VE3 508 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 OR10G2Q8NGC3 310 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 RAB7BQ96AH8 199 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 SAMD11Q96NU1 681 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 PKP4Q99569 1192 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 HCFC1R1Q9NWW0 138 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 HCN1O60741 890 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 PIK3CBP42338 1070 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 AVPR1BP47901 424 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 PCBP2Q15366 365 aaKnown RBP eCLIP13.79□□□□□ -0.21e-8■■■■■ 46
NPHP4-208ENST00000478423 DDI2Q5TDH0 399 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 KHDRBS2Q5VWX1 349 aaKnown RBP13.79□□□□□ -0.2
NPHP4-208ENST00000478423 DPY19L2P1Q6NXN4 242 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 CAMKVQ8NCB2 501 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 FBXO15Q8NCQ5 510 aaPredicted RBP13.79□□□□□ -0.2
NPHP4-208ENST00000478423 TSPEARQ8WU66 669 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 ARMC5Q96C12 935 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 TVP23BQ9NYZ1 205 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 UTS2RQ9UKP6 389 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 OARD1Q9Y530 152 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 PLK4O00444 970 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 CASKO14936 926 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 CA3P07451 260 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 EPCAMP16422 314 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 MYL9P24844 172 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 SLC6A4P31645 630 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 BTN3A2P78410 334 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 ZNF763Q0D2J5 394 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 KCTD8Q6ZWB6 473 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 LGI4Q8N135 537 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 SCML4Q8N228 414 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 NATD1Q8N6N6 113 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 CHCHD6Q9BRQ6 235 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 COPS4Q9BT78 406 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 XKR8Q9H6D3 395 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 IL26Q9NPH9 171 aa13.79□□□□□ -0.2
NPHP4-208ENST00000478423 PPIEQ9UNP9 301 aaKnown RBP13.79□□□□□ -0.2
NPHP4-208ENST00000478423 SNNO75324 88 aaPredicted RBP13.78□□□□□ -0.2
NPHP4-208ENST00000478423 RPS6KA3P51812 740 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 WDR5P61964 334 aaKnown RBP13.78□□□□□ -0.2
NPHP4-208ENST00000478423 SH3BP2P78314 561 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms