RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 EPHB6O15197 1021 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 AP5Z1O43299 807 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 RECQL5O94762 991 aaPredicted RBP3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 CSN3P07498 182 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 PCP11498 1178 aaKnown RBP3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 EPCAMP16422 314 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 ZNF26P17031 533 aaPredicted RBP3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 CEBPBP17676 345 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 GP5P40197 560 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 POLR2FP61218 127 aaKnown RBP3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 ACTN3Q08043 901 aaPredicted RBP3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 NPTX1Q15818 432 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 ZFP69Q49AA0 526 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 LCN1P1Q5VSP4 162 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 C11orf88Q6PI97 169 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 TRAT1Q6PIZ9 186 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 G2E3Q7L622 706 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 RAB42Q8N4Z0 105 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 SEPT1Q8WYJ6 367 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 TAF4BQ92750 862 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 EXT2Q93063 718 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 EXOC4Q96A65 974 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 RBM18Q96H35 190 aaKnown RBP3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 MAGED4Q96JG8 741 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 CCDC43Q96MW1 224 aaKnown RBP3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 ZMYND12Q9H0C1 365 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 ST6GALNAC4Q9H4F1 302 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 TLE6Q9H808 572 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 Q9H8V8 135 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 COPS7BQ9H9Q2 264 aaPredicted RBP3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 PFDN4Q9NQP4 134 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 ATAD3AQ9NVI7 634 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 HPF1Q9NWY4 346 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 OR6C2Q9NZP2 312 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 TXNDC16Q9P2K2 825 aa3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 C19orf25Q9UFG5 118 aaPredicted RBP3.48□□□□□ -1.85
SMARCA1-204ENST00000478420 A0A0U1RQK1 487 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 ZNF320A2RRD8 509 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 H0YAE9 185 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 DDX39AO00148 427 aaKnown RBP3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 O00370 1275 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 KERAO60938 352 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 GLRA3O75311 464 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 RPS6KA5O75582 802 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 CDK2AP2O75956 126 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 DDHD2O94830 711 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 MYL6BP14649 208 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 DARSP14868 501 aaKnown RBP3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 GAP43P17677 238 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 HLA-DPA1P20036 260 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 TCF7P36402 384 aaPredicted RBP3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 PEX19P40855 299 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 NKX2-1P43699 371 aaPredicted RBP3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 VAMP7P51809 220 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 BMXP51813 675 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 ERVK11-1P61568 191 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 GCNT1Q02742 428 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 HNRNPDQ14103 355 aaKnown RBP3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 HYAL4Q2M3T9 481 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 WSCD2Q2TBF2 565 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 XKR6Q5GH73 641 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 SLC25A53Q5H9E4 307 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 ADAMTSL4-AS1Q5T5F5 129 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 OR4A47Q6IF82 309 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 PWWP2BQ6NUJ5 590 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 CAVIN1Q6NZI2 390 aaKnown RBP3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 BHLHB9Q6PI77 547 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 ERN2Q76MJ5 926 aaKnown RBP3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 ADCK2Q7Z695 626 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 RASGEF1AQ8N9B8 481 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 NOA1Q8NC60 698 aaKnown RBP3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 DBF4BQ8NFT6 615 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 KIF18AQ8NI77 898 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 VANGL1Q8TAA9 524 aaPredicted RBP3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 GRK7Q8WTQ7 553 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 KCNE4Q8WWG9 221 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 PROX1Q92786 737 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 ART5Q96L15 291 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 RMDN2Q96LZ7 410 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 EGFL8Q99944 293 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 CITED2Q99967 270 aaPredicted RBP3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 FUCA2Q9BTY2 467 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 THUMPD3Q9BV44 507 aaKnown RBP3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 SLC2A11Q9BYW1 496 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 SHARPINQ9H0F6 387 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 ATP13A3Q9H7F0 1226 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 DNAJC4Q9NNZ3 241 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 GSN-AS1Q9NRJ2 163 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 EPHA6Q9UF33 1036 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 MOSPD1Q9UJG1 213 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 ANAPC5Q9UJX4 755 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 MAN1B1Q9UKM7 699 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 PYGO1Q9Y3Y4 419 aa3.47□□□□□ -1.85
SMARCA1-204ENST00000478420 A0A087X002 238 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 TRAV24A0A0B4J272 114 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 A0A1W2PPK0 400 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 MSGN1A6NI15 193 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 MPHOSPH10O00566 681 aaKnown RBP3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 EXTL3O43909 919 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 SNX3O60493 162 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms