RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 CYB561P49447 251 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 GSTM4Q03013 218 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 KRTAP1-1Q07627 177 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 AP1B1Q10567 949 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 GRB7Q14451 532 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 MESDQ14696 234 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 SF1Q15637 639 aaKnown RBP6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 SYT16Q17RD7 645 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 B3GNT6Q6ZMB0 384 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 LANCL3Q6ZV70 420 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 WDR53Q7Z5U6 358 aaPredicted RBP6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 RPS19BP1Q86WX3 136 aaKnown RBP6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 SHISA5Q8N114 240 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 SLC5A8Q8N695 610 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 CLDN19Q8N6F1 224 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 PLD5Q8N7P1 536 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 KCTD6Q8NC69 237 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 OR4K2Q8NGD2 314 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 METTL21AQ8WXB1 218 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 TMEM125Q96AQ2 219 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 ULK4Q96C45 1275 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 BTBD6Q96KE9 485 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 TEKT5Q96M29 485 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 SECISBP2Q96T21 854 aaKnown RBP6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 PIP5K1AQ99755 562 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 SH3GL2Q99962 352 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 ZFYVE21Q9BQ24 234 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 FICDQ9BVA6 458 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 CDCP1Q9H5V8 836 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 FAM96AQ9H5X1 160 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 VPS37BQ9H9H4 285 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 MYO1AQ9UBC5 1043 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 EGFL7Q9UHF1 273 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 CRLS1Q9UJA2 301 aa6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 SONP18583 2426 aaKnown RBP6.88□□□□□ -1.31
SPTLC1-205ENST00000477888 ANK2Q01484 3957 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 A0A0A6YYK5 440 aaPredicted RBP6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 SLC5A10A0PJK1 596 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 CLDN4O14493 209 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 PRPF4O43172 522 aaKnown RBP eCLIP6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 KDM1AO60341 852 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 FKBP9O95302 570 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 HRGP04196 525 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 CYC1P08574 325 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 CCDC172P0C7W6 258 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 MYBL1P10243 752 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 FERP16591 822 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 BMP7P18075 431 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 TACR1P25103 407 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 PTPN3P26045 913 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 TPP2P29144 1249 aaPredicted RBP6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 TRHRP34981 398 aaPredicted RBP6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 CDKN1CP49918 316 aaPredicted RBP6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 MAT1AQ00266 395 aaKnown RBP6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 MSLNQ13421 630 aaPredicted RBP6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 PDK2Q15119 407 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 TAF1AQ15573 450 aaPredicted RBP6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 EXT1Q16394 746 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 FBXL19-AS1Q494R0 122 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 CATSPEREQ5SY80 951 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 FBXW10Q5XX13 1052 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 RNF44Q7L0R7 432 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 SNX20Q7Z614 316 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 ANKRD37Q7Z713 158 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 YTHDF3Q7Z739 585 aaKnown RBP6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 OR5M9Q8NGP3 310 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 OR2L8Q8NGY9 312 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 SLCO2A1Q92959 643 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 MMABQ96EY8 250 aaPredicted RBP6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 OXNAD1Q96HP4 312 aaPredicted RBP6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 ZNF830Q96NB3 372 aaPredicted RBP6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 OLFM3Q96PB7 478 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 PLCD4Q9BRC7 762 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 DEFB127Q9H1M4 99 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 SYNPO2LQ9H987 977 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 ZDHHC3Q9NYG2 299 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 IP6K2Q9UHH9 426 aa6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 KLF13Q9Y2Y9 288 aaPredicted RBP6.87□□□□□ -1.31
SPTLC1-205ENST00000477888 A0A0A6YYC8 382 aaPredicted RBP6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 TRBV5-4A0A0C4DH59 114 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 OR14I1A6ND48 311 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 OR2W5A6NFC9 320 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 C5orf60A6NFR6 353 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 TUBAL3A6NHL2 446 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 FIGNL2A6NMB9 653 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 C2orf81A6NN90 581 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 CLCA1A8K7I4 914 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 H0YGG7 62 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 I3L1I5 382 aaPredicted RBP6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 NDC80O14777 642 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 BCKDKO14874 412 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 PHF1O43189 567 aaPredicted RBP6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 PEX1O43933 1283 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 SMPD2O60906 423 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 AP2A2O94973 939 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 GOSR1O95249 250 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 SIX3O95343 332 aaPredicted RBP6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 ACRV1P26436 265 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 HLCSP50747 726 aa6.86□□□□□ -1.31
SPTLC1-205ENST00000477888 ITGA8P53708 1063 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms