RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 HEXA-AS1Q9H8Q6 139 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 C14orf119Q9NWQ9 140 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 CMTM6Q9NX76 183 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 A0A0B4J293 547 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 FAM159BA6NKW6 160 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 ZNF729A6NN14 1252 aaPredicted RBP12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 KCNU1A8MYU2 1149 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 DNASE2O00115 360 aaPredicted RBP12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 NRP2O60462 931 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 B3GAT3O94766 335 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 F9P00740 461 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 INHAP05111 366 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 ALPLP05186 524 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 CKBP12277 381 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 CD36P16671 472 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 PSMB9P28065 219 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 RPL22P35268 128 aaKnown RBP12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 TGFBR2P37173 567 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 MATKP42679 507 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 AFF1P51825 1210 aaKnown RBP12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 PGDP52209 483 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 RIDAP52758 137 aaKnown RBP12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 ADIGQ0VDE8 80 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 HYAL2Q12891 473 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 PUM1Q14671 1186 aaKnown RBP eCLIP12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 C3orf33Q6P1S2 294 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 SLC9B2Q86UD5 537 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 GPR156Q8NFN8 814 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 SLC38A4Q969I6 547 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 MYLPFQ96A32 169 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 RNF31Q96EP0 1072 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 PTDSS2Q9BVG9 487 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 C1QTNF1Q9BXJ1 281 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 UGT2B28Q9BY64 529 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 ZCCHC2Q9C0B9 1178 aaKnown RBP12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 TFB2MQ9H5Q4 396 aaKnown RBP12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 CCNB1IP1Q9NPC3 277 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 EQTNQ9NQ60 294 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 STARD7Q9NQZ5 370 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 PURGQ9UJV8 347 aaKnown RBP12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 PNMA8BQ9ULN7 279 aaPredicted RBP12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 TPRKBQ9Y3C4 175 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 EFCAB7A8K855 629 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 DSCR3O14972 297 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 SEC14L5O43304 696 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 AIREO43918 545 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 CYP7B1O75881 506 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 EOMESO95936 686 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 POMCP01189 267 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 FBP1P09467 338 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 HLA-EP13747 358 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 JUNDP17535 347 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 CTPS1P17812 591 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 TFE3P19532 575 aaPredicted RBP12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 PTAFRP25105 342 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 RYKP34925 604 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 SOX6P35712 828 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 RPL14P50914 215 aaKnown RBP12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 YWHAZP63104 245 aaKnown RBP12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 PLIN5Q00G26 463 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 ROR1Q01973 937 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 PIGFQ07326 219 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 CD47Q08722 323 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 MEP1AQ16819 746 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 SLC25A52Q3SY17 297 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 KDELC1Q6UW63 502 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 CLEC20AQ6ZU45 233 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 ASPGQ86U10 573 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 IL17RCQ8NAC3 791 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 FAM110BQ8TC76 370 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 NSMAFQ92636 917 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 C11orf84Q9BUA3 381 aaPredicted RBP12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 MED18Q9BUE0 208 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 SNRNP25Q9BV90 132 aaKnown RBP12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 REG4Q9BYZ8 158 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 MMP28Q9H239 520 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 DUSP21Q9H596 190 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 CHRAC1Q9NRG0 131 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 FAM118AQ9NWS6 357 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 SDHAF2Q9NX18 166 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 ING4Q9UNL4 249 aa12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 TDRD15B5MCY1 1934 aaKnown RBP12.3□□□□□ -0.44
RTFDC1-207ENST00000477573 TCRBV7S3A2A0A539 114 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 A8MXK9 166 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 PSMD9O00233 223 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 CLDN5O00501 218 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 PROM1O43490 865 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 TPST1O60507 370 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 NOS2P35228 1153 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 HERVK_113P63132 956 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 EXOSC2Q13868 293 aaKnown RBP12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 GPR19Q15760 415 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 TIGD5Q53EQ6 642 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 ZC3H12BQ5HYM0 836 aaKnown RBP12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 DGKKQ5KSL6 1271 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 GLB1LQ6UWU2 654 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 PAQR9Q6ZVX9 377 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 CYS1Q717R9 158 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 RTL10Q7L3V2 364 aa12.29□□□□□ -0.44
RTFDC1-207ENST00000477573 RAB11FIP2Q7L804 512 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms