RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 TMPRSS12Q86WS5 348 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 C10orf107Q8IVU9 208 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 GALNT15Q8N3T1 639 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 MGARPQ8TDB4 240 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 KLHL6Q8WZ60 621 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 L3HYPDHQ96EM0 354 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 LIN37Q96GY3 246 aaPredicted RBP14.72□□□□□ -0.05
SEC13-215ENST00000477547 SLC41A2Q96JW4 573 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 NSUN5Q96P11 429 aaKnown RBP14.72□□□□□ -0.05
SEC13-215ENST00000477547 CCDC86Q9H6F5 360 aaKnown RBP14.72□□□□□ -0.05
SEC13-215ENST00000477547 MLXIPLQ9NP71 852 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 GPRC5BQ9NZH0 403 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 SEMA5BQ9P283 1151 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 BTRCQ9Y297 605 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 RAXQ9Y2V3 346 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 KNTC1P50748 2209 aa14.72□□□□□ -0.05
SEC13-215ENST00000477547 OR2A25A4D2G3 310 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 FAM149AA5PLN7 773 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 EIF4E1BA6NMX2 242 aaKnown RBP14.71□□□□□ -0.05
SEC13-215ENST00000477547 CLGNO14967 610 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 MAP3K7O43318 606 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 PRAMEF10O60809 474 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 SUPT7LO94864 414 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 JUPP14923 745 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 EPB42P16452 691 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 NELFEP18615 380 aaKnown RBP14.71□□□□□ -0.05
SEC13-215ENST00000477547 EPORP19235 508 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 ALDH3A1P30838 453 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 CSTF2P33240 577 aaKnown RBP eCLIP14.71□□□□□ -0.056e-12■■■□□ 17.9
SEC13-215ENST00000477547 ARL1P40616 181 aaPredicted RBP14.71□□□□□ -0.05
SEC13-215ENST00000477547 HSD11B2P80365 405 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 ASPHQ12797 758 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 GPS2Q13227 327 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 KCNAB1Q14722 419 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 ZIC1Q15915 447 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 DEFB110Q30KQ9 67 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 ZNF678Q5SXM1 525 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 CATSPEREQ5SY80 951 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 HHATQ5VTY9 493 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 FCRL6Q6DN72 434 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 ZNF425Q6IV72 752 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 FIGLAQ6QHK4 219 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 RPS27LQ71UM5 84 aaKnown RBP14.71□□□□□ -0.05
SEC13-215ENST00000477547 FAM129CQ86XR2 697 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 CCNYL1Q8N7R7 359 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 AGBL5Q8NDL9 886 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 PPP4R1Q8TF05 950 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 ZNF483Q8TF39 744 aaPredicted RBP14.71□□□□□ -0.05
SEC13-215ENST00000477547 SREK1Q8WXA9 508 aaKnown RBP14.71□□□□□ -0.05
SEC13-215ENST00000477547 PLCD4Q9BRC7 762 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 C1QTNF3Q9BXJ4 246 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 PELI2Q9HAT8 420 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 PDE7BQ9NP56 450 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 MED4Q9NPJ6 270 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 ACSS2Q9NR19 701 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 OXSMQ9NWU1 459 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 AKAP7Q9P0M2 348 aaPredicted RBP14.71□□□□□ -0.05
SEC13-215ENST00000477547 SPTBP11277 2137 aa14.71□□□□□ -0.05
SEC13-215ENST00000477547 HELZ2Q9BYK8 2649 aaKnown RBP14.71□□□□□ -0.05
SEC13-215ENST00000477547 CCDC187A0A096LP49 1063 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 H7BY64 318 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 HAT1O14929 419 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 KATNA1O75449 491 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 BPGMP07738 259 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 EBLN1P0CF75 366 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 DHRS4L1P0CG22 281 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 IMPDH1P20839 514 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 HRH2P25021 359 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 CCR8P51685 355 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 DNAJB13P59910 316 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 RBBP7Q16576 425 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 UNC50Q53HI1 259 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 CFAP157Q5JU67 520 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 TMTC4Q5T4D3 741 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 PAQR7Q86WK9 346 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 ABHD11Q8NFV4 315 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 TCTN2Q96GX1 697 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 PRAP1Q96NZ9 151 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 CMKLR1Q99788 373 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 PAIP2Q9BPZ3 127 aaKnown RBP14.7□□□□□ -0.06
SEC13-215ENST00000477547 CAPS2Q9BXY5 557 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 SEMA4BQ9NPR2 832 aaPredicted RBP14.7□□□□□ -0.06
SEC13-215ENST00000477547 SIDT1Q9NXL6 827 aaKnown RBP14.7□□□□□ -0.06
SEC13-215ENST00000477547 SNX7Q9UNH6 387 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 LOXL2Q9Y4K0 774 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 KLK4Q9Y5K2 254 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 APC2O95996 2303 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 ACACAQ13085 2346 aa14.7□□□□□ -0.06
SEC13-215ENST00000477547 EFCAB7A8K855 629 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 TRIM13O60858 407 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 EZRP15311 586 aaKnown RBP14.69□□□□□ -0.06
SEC13-215ENST00000477547 NR1D1P20393 614 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 VARSP26640 1264 aaKnown RBP14.69□□□□□ -0.06
SEC13-215ENST00000477547 SLC18A1P54219 525 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 NAGLUP54802 743 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 CDH13P55290 713 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 PPP2R2AP63151 447 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 SH3BP2P78314 561 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 CSNK1G2P78368 415 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 REEP5Q00765 189 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms