RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	FUBP1	Q96AE4	644 aa	Known RBP	4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	SH3KBP1	Q96B97	665 aa		4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	CFAP36	Q96G28	342 aa		4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	VPS39	Q96JC1	886 aa		4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	DNAJC1	Q96KC8	554 aa	Known RBP	4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	BMF	Q96LC9	184 aa		4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	TBATA	Q96M53	351 aa		4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	FOPNL	Q96NB1	174 aa		4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	OR2M4	Q96R27	311 aa		4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	FMO2	Q99518	471 aa		4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	KLF6	Q99612	283 aa	Predicted RBP	4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	EBNA1BP2	Q99848	306 aa	Known RBP	4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	CCM2	Q9BSQ5	444 aa		4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	KIFC1	Q9BW19	673 aa		4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	OR2AG1	Q9H205	316 aa		4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	DPEP2	Q9H4A9	486 aa		4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	OSGEPL1	Q9H4B0	414 aa		4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	SAYSD1	Q9NPB0	183 aa		4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	IL26	Q9NPH9	171 aa		4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	MBNL1	Q9NR56	388 aa	Known RBP	4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	CHRAC1	Q9NRG0	131 aa		4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	TMEM74B	Q9NUR3	256 aa		4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	SMOX	Q9NWM0	555 aa		4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	TRNAU1AP	Q9NX07	287 aa	Known RBP	4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	GNPTG	Q9UJJ9	305 aa		4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	GPR34	Q9UPC5	381 aa		4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	MAPRE3	Q9UPY8	281 aa		4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	PCDHB1	Q9Y5F3	818 aa		4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	PCDHGB2	Q9Y5G2	931 aa		4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	CSNK1G3	Q9Y6M4	447 aa		4.41	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	ANKRD36	A6QL64	1941 aa		4.4	□□□□□ -1.7
NSMCE4A-208	ENST00000477289	TRPM6	Q9BX84	2022 aa		4.4	□□□□□ -1.7
NSMCE4A-208	ENST00000477289		A0A1B0GTQ1	180 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	LNP1	A1A4G5	178 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	CCDC162P	A2VCL2	907 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	OR5K4	A6NMS3	321 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	C4orf47	A7E2U8	309 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	PDZK1P1	A8MUH7	402 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	PRMT5	O14744	637 aa	Predicted RBP	4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	TPP1	O14773	563 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	LDB2	O43679	373 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	PCDHGA12	O60330	932 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	UGT1A9	O60656	530 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SNX2	O60749	519 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	AVIL	O75366	819 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	VPS26A	O75436	327 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	TMEM63A	O94886	807 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	LDOC1	O95751	146 aa	Predicted RBP	4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	APOA4	P06727	396 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SLC35G4	P0C7Q5	338 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ITGAM	P11215	1152 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ATP1B2	P14415	290 aa	Predicted RBP	4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ALOX15	P16050	662 aa	Predicted RBP	4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	UGT1A6	P19224	532 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	CHRM3	P20309	590 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	OGN	P20774	298 aa	Known RBP	4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	UGT1A1	P22309	533 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	UGT1A4	P22310	534 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ENPP1	P22413	925 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ADSL	P30566	484 aa	Predicted RBP	4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	UGT1A3	P35503	534 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	UGT1A5	P35504	534 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ELK3	P41970	407 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ACTR1B	P42025	376 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	GRIA1	P42261	906 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	MAGEA4	P43358	317 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	MAPK9	P45984	424 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	RXRG	P48443	463 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ZNF140	P52738	457 aa	Predicted RBP	4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ACTR1A	P61163	376 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	BLOC1S1	P78537	153 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	CRADD	P78560	199 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	OLIG2	Q13516	323 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	FGL2	Q14314	439 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	FZD2	Q14332	565 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	CDKN3	Q16667	212 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	KLHL38	Q2WGJ6	581 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ANKRD20A4	Q4UJ75	823 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ATP13A5	Q4VNC0	1218 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ZNF542P	Q5EBM4	170 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	FNBP1L	Q5T0N5	605 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	GPRC6A	Q5T6X5	926 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	STPG1	Q5TH74	334 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ANKRD22	Q5VYY1	191 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	LRRC8E	Q6NSJ5	796 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	NEPRO	Q6NW34	567 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	KLHL35	Q6PF15	583 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	KIAA0408	Q6ZU52	694 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SLC9B2	Q86UD5	537 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	AMZ2	Q86W34	360 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SERPINA9	Q86WD7	417 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	CTAGE3P	Q8IX95	158 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	DCLK2	Q8N568	766 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	EIF1AD	Q8N9N8	165 aa	Known RBP	4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	FAM46D	Q8NEK8	389 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	DDHD1	Q8NEL9	900 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	MAGEC3	Q8TD91	643 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	TSPEAR	Q8WU66	669 aa		4.4	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SKA2	Q8WVK7	121 aa	Predicted RBP	4.4	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms