RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 FAM13CQ8NE31 585 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 CXorf40BQ96DE9 158 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 CMTM7Q96FZ5 175 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 ASIC5Q9NY37 505 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 ZIM2Q9NZV7 527 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 MAP10Q9P2G4 905 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 VPS29Q9UBQ0 182 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 APOBEC3BQ9UH17 382 aaKnown RBP13.91□□□□□ -0.18
COL4A6-206ENST00000477085 A0A0C4DFX4 3053 aa13.91□□□□□ -0.18
COL4A6-206ENST00000477085 FEZF1A0PJY2 475 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 NR5A2O00482 541 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 SORBS2O94875 1100 aaKnown RBP13.9□□□□□ -0.18
COL4A6-206ENST00000477085 CTSEP14091 401 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 NME1P15531 152 aaKnown RBP13.9□□□□□ -0.18
COL4A6-206ENST00000477085 XRCC1P18887 633 aaPredicted RBP13.9□□□□□ -0.18
COL4A6-206ENST00000477085 PGM1P36871 562 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 MAGEA9P43362 315 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 NXPH1P58417 271 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 RAE1P78406 368 aaKnown RBP13.9□□□□□ -0.18
COL4A6-206ENST00000477085 GPR18Q14330 331 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 ZNF423Q2M1K9 1284 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 HOMEZQ8IX15 550 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 ADGRF3Q8IZF5 1079 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 DEFB107AQ8IZN7 70 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 RAB42Q8N4Z0 105 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 FBXL6Q8N531 539 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 EFCAB3Q8N7B9 438 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 ANKRD53Q8N9V6 530 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 KYQ8NBH2 561 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 FLVCR1-AS1Q8TAF5 88 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 LCN9Q8WX39 176 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 VPS33AQ96AX1 596 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 FCRL1Q96LA6 429 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 THTPAQ9BU02 230 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 PCBD2Q9H0N5 130 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 EFCAB1Q9HAE3 211 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 BRF2Q9HAW0 419 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 SLC6A20Q9NP91 592 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 CPNE7Q9UBL6 633 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 PCDHB11Q9Y5F2 797 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 GON4LQ3T8J9 2241 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 CACNA1IQ9P0X4 2223 aa13.9□□□□□ -0.18
COL4A6-206ENST00000477085 FANCMQ8IYD8 2048 aa13.89□□□□□ -0.19
COL4A6-206ENST00000477085 FOXE1O00358 373 aaPredicted RBP13.89□□□□□ -0.19
COL4A6-206ENST00000477085 LCMT2O60294 686 aaKnown RBP13.89□□□□□ -0.19
COL4A6-206ENST00000477085 CHRM5P08912 532 aaPredicted RBP13.89□□□□□ -0.19
COL4A6-206ENST00000477085 EZRP15311 586 aaKnown RBP13.89□□□□□ -0.19
COL4A6-206ENST00000477085 NDUFS1P28331 727 aa13.89□□□□□ -0.19
COL4A6-206ENST00000477085 CSNK1G2P78368 415 aa13.89□□□□□ -0.19
COL4A6-206ENST00000477085 IRX1P78414 480 aaPredicted RBP13.89□□□□□ -0.19
COL4A6-206ENST00000477085 STX5Q13190 355 aa13.89□□□□□ -0.19
COL4A6-206ENST00000477085 RCAN2Q14206 197 aa13.89□□□□□ -0.19
COL4A6-206ENST00000477085 PAGE2BQ5JRK9 111 aa13.89□□□□□ -0.19
COL4A6-206ENST00000477085 NOXRED1Q6NXP6 359 aa13.89□□□□□ -0.19
COL4A6-206ENST00000477085 TMIGD1Q6UXZ0 262 aa13.89□□□□□ -0.19
COL4A6-206ENST00000477085 KRTCAP2Q8N6L1 136 aa13.89□□□□□ -0.19
COL4A6-206ENST00000477085 CLHC1Q8NHS4 586 aa13.89□□□□□ -0.19
COL4A6-206ENST00000477085 SLC37A2Q8TED4 501 aa13.89□□□□□ -0.19
COL4A6-206ENST00000477085 CHTF18Q8WVB6 975 aa13.89□□□□□ -0.19
COL4A6-206ENST00000477085 APOLD1Q96LR9 279 aa13.89□□□□□ -0.19
COL4A6-206ENST00000477085 SLC25A23Q9BV35 468 aa13.89□□□□□ -0.19
COL4A6-206ENST00000477085 RAB11FIP5Q9BXF6 653 aa13.89□□□□□ -0.19
COL4A6-206ENST00000477085 MRPL1Q9BYD6 325 aaKnown RBP13.89□□□□□ -0.19
COL4A6-206ENST00000477085 SYNPO2LQ9H987 977 aa13.89□□□□□ -0.19
COL4A6-206ENST00000477085 PELI2Q9HAT8 420 aa13.89□□□□□ -0.19
COL4A6-206ENST00000477085 DMRT3Q9NQL9 472 aa13.89□□□□□ -0.19
COL4A6-206ENST00000477085 EIF3LQ9Y262 564 aaKnown RBP13.89□□□□□ -0.19
COL4A6-206ENST00000477085 TECTAO75443 2155 aa13.89□□□□□ -0.19
COL4A6-206ENST00000477085 DMDP11532 3685 aa13.89□□□□□ -0.19
COL4A6-206ENST00000477085 CCDC163A0A0D9SF12 145 aa13.88□□□□□ -0.19
COL4A6-206ENST00000477085 H0YHG0 523 aa13.88□□□□□ -0.19
COL4A6-206ENST00000477085 KLHL18O94889 574 aa13.88□□□□□ -0.19
COL4A6-206ENST00000477085 TGFB1P01137 390 aa13.88□□□□□ -0.19
COL4A6-206ENST00000477085 HOXB3P14651 431 aaPredicted RBP13.88□□□□□ -0.19
COL4A6-206ENST00000477085 SDC1P18827 310 aa13.88□□□□□ -0.19
COL4A6-206ENST00000477085 BLKP51451 505 aa13.88□□□□□ -0.19
COL4A6-206ENST00000477085 CCR8P51685 355 aa13.88□□□□□ -0.19
COL4A6-206ENST00000477085 POLR2JP52435 117 aaKnown RBP13.88□□□□□ -0.19
COL4A6-206ENST00000477085 LAPTM5Q13571 262 aa13.88□□□□□ -0.19
COL4A6-206ENST00000477085 TLR1Q15399 786 aa13.88□□□□□ -0.19
COL4A6-206ENST00000477085 MAPRE2Q15555 327 aa13.88□□□□□ -0.19
COL4A6-206ENST00000477085 DNAL1Q4LDG9 190 aa13.88□□□□□ -0.19
COL4A6-206ENST00000477085 KIAA1614Q5VZ46 1190 aa13.88□□□□□ -0.19
COL4A6-206ENST00000477085 C8orf82Q6P1X6 216 aaPredicted RBP13.88□□□□□ -0.19
COL4A6-206ENST00000477085 PLD3Q8IV08 490 aa13.88□□□□□ -0.19
COL4A6-206ENST00000477085 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.88□□□□□ -0.19
COL4A6-206ENST00000477085 C10orf67Q8IYJ2 551 aa13.88□□□□□ -0.19
COL4A6-206ENST00000477085 FAM46DQ8NEK8 389 aa13.88□□□□□ -0.19
COL4A6-206ENST00000477085 OR2L3Q8NG85 312 aa13.88□□□□□ -0.19
COL4A6-206ENST00000477085 EGLN2Q96KS0 407 aa13.88□□□□□ -0.19
COL4A6-206ENST00000477085 RAB3IPQ96QF0 476 aaPredicted RBP13.88□□□□□ -0.19
COL4A6-206ENST00000477085 EBPLQ9BY08 206 aa13.88□□□□□ -0.19
COL4A6-206ENST00000477085 OR51B5Q9H339 312 aa13.88□□□□□ -0.19
COL4A6-206ENST00000477085 OR6C2Q9NZP2 312 aa13.88□□□□□ -0.19
COL4A6-206ENST00000477085 KLHL20Q9Y2M5 609 aa13.88□□□□□ -0.19
COL4A6-206ENST00000477085 TSC22D4Q9Y3Q8 395 aa13.88□□□□□ -0.19
COL4A6-206ENST00000477085 SAP18O00422 153 aaKnown RBP13.88□□□□□ -0.19
COL4A6-206ENST00000477085 VILLO15195 856 aa13.88□□□□□ -0.19
COL4A6-206ENST00000477085 HSD3B1P14060 373 aa13.88□□□□□ -0.19
COL4A6-206ENST00000477085 JAK1P23458 1154 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms