RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 OR2L3Q8NG85 312 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 OR9I1Q8NGQ6 314 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 NELL1Q92832 810 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 AIF1LQ9BQI0 150 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 MRPS30Q9NP92 439 aaKnown RBP27.75■■■□□ 2.03
VEGFA-211ENST00000476772 SDR39U1Q9NRG7 319 aaPredicted RBP27.75■■■□□ 2.03
VEGFA-211ENST00000476772 UCKL1Q9NWZ5 548 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 MAZP56270 477 aaKnown RBP27.74■■■□□ 2.03
VEGFA-211ENST00000476772 REEP5Q00765 189 aa27.74■■■□□ 2.03
VEGFA-211ENST00000476772 BNC1Q01954 994 aa27.74■■■□□ 2.03
VEGFA-211ENST00000476772 RPS6KA2Q15349 733 aa27.74■■■□□ 2.03
VEGFA-211ENST00000476772 SF1Q15637 639 aaKnown RBP27.74■■■□□ 2.03
VEGFA-211ENST00000476772 SMU1Q2TAY7 513 aa27.74■■■□□ 2.03
VEGFA-211ENST00000476772 IL23RQ5VWK5 629 aa27.74■■■□□ 2.03
VEGFA-211ENST00000476772 TMIGD1Q6UXZ0 262 aa27.74■■■□□ 2.03
VEGFA-211ENST00000476772 CEP68Q76N32 757 aa27.74■■■□□ 2.03
VEGFA-211ENST00000476772 OR4K1Q8NGD4 311 aa27.74■■■□□ 2.03
VEGFA-211ENST00000476772 UBE2E3Q969T4 207 aa27.74■■■□□ 2.03
VEGFA-211ENST00000476772 BRINP2Q9C0B6 783 aa27.74■■■□□ 2.03
VEGFA-211ENST00000476772 ERVMER34-1Q9H9K5 563 aa27.74■■■□□ 2.03
VEGFA-211ENST00000476772 BRF2Q9HAW0 419 aa27.74■■■□□ 2.03
VEGFA-211ENST00000476772 PRM3Q9NNZ6 103 aa27.74■■■□□ 2.03
VEGFA-211ENST00000476772 SLC6A20Q9NP91 592 aa27.74■■■□□ 2.03
VEGFA-211ENST00000476772 NOP53Q9NZM5 478 aaKnown RBP27.74■■■□□ 2.03
VEGFA-211ENST00000476772 CCDC167Q9P0B6 97 aa27.74■■■□□ 2.03
VEGFA-211ENST00000476772 TMEM131Q92545 1883 aa27.73■■■□□ 2.03
VEGFA-211ENST00000476772 NPIPB8E9PQR5 432 aa27.73■■■□□ 2.03
VEGFA-211ENST00000476772 LMO7DNF2Z398 122 aa27.73■■■□□ 2.03
VEGFA-211ENST00000476772 HSD3B1P14060 373 aa27.73■■■□□ 2.03
VEGFA-211ENST00000476772 HSD3B2P26439 372 aa27.73■■■□□ 2.03
VEGFA-211ENST00000476772 IRX1P78414 480 aaPredicted RBP27.73■■■□□ 2.03
VEGFA-211ENST00000476772 ACTN3Q08043 901 aaPredicted RBP27.73■■■□□ 2.03
VEGFA-211ENST00000476772 HERC3Q15034 1050 aa27.73■■■□□ 2.03
VEGFA-211ENST00000476772 DEFB133Q30KQ1 61 aa27.73■■■□□ 2.03
VEGFA-211ENST00000476772 RINLQ6ZS11 566 aa27.73■■■□□ 2.03
VEGFA-211ENST00000476772 ASRGL1Q7L266 308 aa27.73■■■□□ 2.03
VEGFA-211ENST00000476772 KLHL29Q96CT2 875 aa27.73■■■□□ 2.03
VEGFA-211ENST00000476772 CMTM7Q96FZ5 175 aa27.73■■■□□ 2.03
VEGFA-211ENST00000476772 SLC45A3Q96JT2 553 aa27.73■■■□□ 2.03
VEGFA-211ENST00000476772 TWSG1Q9GZX9 223 aa27.73■■■□□ 2.03
VEGFA-211ENST00000476772 SUSD2Q9UGT4 822 aa27.73■■■□□ 2.03
VEGFA-211ENST00000476772 ETHE1O95571 254 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 THRAP10827 490 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 CXCR2P25025 360 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 MRPL19P49406 292 aaKnown RBP27.72■■■□□ 2.03
VEGFA-211ENST00000476772 RASSF2P50749 326 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 RPS13P62277 151 aaKnown RBP27.72■■■□□ 2.03
VEGFA-211ENST00000476772 CSNK1G2P78368 415 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 ABATP80404 500 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 MAD2L1Q13257 205 aaPredicted RBP27.72■■■□□ 2.03
VEGFA-211ENST00000476772 KIAA0040Q15053 153 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 RBBP5Q15291 538 aaKnown RBP27.72■■■□□ 2.03
VEGFA-211ENST00000476772 ZNF423Q2M1K9 1284 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 C10orf62Q5T681 223 aaPredicted RBP27.72■■■□□ 2.03
VEGFA-211ENST00000476772 TMEM26Q6ZUK4 368 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 ADCK2Q7Z695 626 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 ZNF761Q86XN6 746 aaPredicted RBP27.72■■■□□ 2.03
VEGFA-211ENST00000476772 SDR16C5Q8N3Y7 309 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 KIF2BQ8N4N8 673 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 OR10G6Q8NH81 332 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 RP9Q8TA86 221 aaKnown RBP27.72■■■□□ 2.03
VEGFA-211ENST00000476772 PIGKQ92643 395 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 APIPQ96GX9 242 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 LRMDAQ9H2I8 198 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 VPS29Q9UBQ0 182 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 RRP15Q9Y3B9 282 aaKnown RBP27.72■■■□□ 2.03
VEGFA-211ENST00000476772 FEZF1A0PJY2 475 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 OR6C74A6NCV1 312 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 CCNDBP1O95273 360 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 ANXA6P08133 673 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 G6PDP11413 515 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 PTPN4P29074 926 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 CMPK1P30085 196 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 CYLC2Q14093 348 aaPredicted RBP27.72■■■□□ 2.03
VEGFA-211ENST00000476772 PDCD4Q53EL6 469 aaKnown RBP27.72■■■□□ 2.03
VEGFA-211ENST00000476772 BMP8AQ7Z5Y6 402 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 RBM12BQ8IXT5 1001 aaKnown RBP27.72■■■□□ 2.03
VEGFA-211ENST00000476772 FBXO27Q8NI29 283 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 ZC3H10Q96K80 434 aaKnown RBP27.72■■■□□ 2.03
VEGFA-211ENST00000476772 DMRT3Q9NQL9 472 aa27.72■■■□□ 2.03
VEGFA-211ENST00000476772 SNRNP200O75643 2136 aaKnown RBP27.71■■■□□ 2.03
VEGFA-211ENST00000476772 HEATR5BQ9P2D3 2071 aa27.71■■■□□ 2.03
VEGFA-211ENST00000476772 B2RBV5 119 aa27.71■■■□□ 2.03
VEGFA-211ENST00000476772 FOXE1O00358 373 aaPredicted RBP27.71■■■□□ 2.03
VEGFA-211ENST00000476772 NOBOXO60393 691 aa27.71■■■□□ 2.03
VEGFA-211ENST00000476772 SH3BGRLO75368 114 aa27.71■■■□□ 2.03
VEGFA-211ENST00000476772 DNAJC8O75937 253 aaPredicted RBP27.71■■■□□ 2.03
VEGFA-211ENST00000476772 POLR2CP19387 275 aaPredicted RBP27.71■■■□□ 2.03
VEGFA-211ENST00000476772 AVPR2P30518 371 aa27.71■■■□□ 2.03
VEGFA-211ENST00000476772 ACADVLP49748 655 aa27.71■■■□□ 2.03
VEGFA-211ENST00000476772 KIR2DS3Q14952 304 aa27.71■■■□□ 2.03
VEGFA-211ENST00000476772 KIAA1614Q5VZ46 1190 aa27.71■■■□□ 2.03
VEGFA-211ENST00000476772 VN1R5Q7Z5H4 357 aa27.71■■■□□ 2.03
VEGFA-211ENST00000476772 FUNDC1Q8IVP5 155 aa27.71■■■□□ 2.03
VEGFA-211ENST00000476772 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP27.71■■■□□ 2.031e-6■■■■■ 38.6
VEGFA-211ENST00000476772 ARL14Q8N4G2 192 aa27.71■■■□□ 2.03
VEGFA-211ENST00000476772 FLVCR1-AS1Q8TAF5 88 aa27.71■■■□□ 2.03
VEGFA-211ENST00000476772 EIF3LQ9Y262 564 aaKnown RBP27.71■■■□□ 2.03
VEGFA-211ENST00000476772 TSC22D4Q9Y3Q8 395 aa27.71■■■□□ 2.03
VEGFA-211ENST00000476772 FAM221BA6H8Z2 402 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms