RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 PCDH12Q9NPG4 1184 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 FAM120CQ9NX05 1096 aaKnown RBP15.93■□□□□ 0.14
TMEM53-208ENST00000476724 DKK3Q9UBP4 350 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 BLOC1S6Q9UL45 172 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 A0A1B0GVG6 124 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 HOXC11O43248 304 aaPredicted RBP15.93■□□□□ 0.14
TMEM53-208ENST00000476724 MTX2O75431 263 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 MYO1DO94832 1006 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 GSNP06396 782 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 TIMP2P16035 220 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 XPAP23025 273 aaPredicted RBP15.93■□□□□ 0.14
TMEM53-208ENST00000476724 DCTP40126 519 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 MAGEA2P43356 314 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 RAD23AP54725 363 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 IL18R1Q13478 541 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 GAB4Q2WGN9 574 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 ARSIQ5FYB1 569 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 TANGO2Q6ICL3 276 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 OR4F3Q6IEY1 312 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 SPESP1Q6UW49 350 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 THOC6Q86W42 341 aaKnown RBP15.93■□□□□ 0.14
TMEM53-208ENST00000476724 ANKRD46Q86W74 232 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 RAVER1Q8IY67 606 aaKnown RBP15.93■□□□□ 0.14
TMEM53-208ENST00000476724 ZNF366Q8N895 744 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 OR8J2Q8NGG1 315 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 GLMNQ92990 594 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 TMEM159Q96B96 161 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 NRBF2Q96F24 287 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 EGLN2Q96KS0 407 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 RIOK2Q9BVS4 552 aaKnown RBP15.93■□□□□ 0.14
TMEM53-208ENST00000476724 SMURF2Q9HAU4 748 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 BRF2Q9HAW0 419 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 SPATA6Q9NWH7 488 aaPredicted RBP15.93■□□□□ 0.14
TMEM53-208ENST00000476724 GPRC5BQ9NZH0 403 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 EBF1Q9UH73 591 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 ORC6Q9Y5N6 252 aa15.93■□□□□ 0.14
TMEM53-208ENST00000476724 ANKRD33BA6NCL7 494 aa15.92■□□□□ 0.14
TMEM53-208ENST00000476724 H0YIV9 168 aa15.92■□□□□ 0.14
TMEM53-208ENST00000476724 E2F6O75461 281 aa15.92■□□□□ 0.14
TMEM53-208ENST00000476724 CATP04040 527 aaKnown RBP15.92■□□□□ 0.14
TMEM53-208ENST00000476724 GPX2P18283 190 aa15.92■□□□□ 0.14
TMEM53-208ENST00000476724 EEF1B2P24534 225 aaKnown RBP15.92■□□□□ 0.14
TMEM53-208ENST00000476724 ELK4P28324 431 aa15.92■□□□□ 0.14
TMEM53-208ENST00000476724 SHMT2P34897 504 aa15.92■□□□□ 0.14
TMEM53-208ENST00000476724 ETV3P41162 512 aa15.92■□□□□ 0.14
TMEM53-208ENST00000476724 CDKN2CP42773 168 aa15.92■□□□□ 0.14
TMEM53-208ENST00000476724 TPD52P55327 224 aaPredicted RBP15.92■□□□□ 0.14
TMEM53-208ENST00000476724 SKIV2LQ15477 1246 aaKnown RBP15.92■□□□□ 0.14
TMEM53-208ENST00000476724 ZNF805Q5CZA5 627 aa15.92■□□□□ 0.14
TMEM53-208ENST00000476724 XKR6Q5GH73 641 aa15.92■□□□□ 0.14
TMEM53-208ENST00000476724 GRHL2Q6ISB3 625 aa15.92■□□□□ 0.14
TMEM53-208ENST00000476724 ANKRD54Q6NXT1 300 aa15.92■□□□□ 0.14
TMEM53-208ENST00000476724 DOK6Q6PKX4 331 aa15.92■□□□□ 0.14
TMEM53-208ENST00000476724 DPPA4Q7L190 304 aa15.92■□□□□ 0.14
TMEM53-208ENST00000476724 GAB3Q8WWW8 586 aa15.92■□□□□ 0.14
TMEM53-208ENST00000476724 PANX1Q96RD7 426 aa15.92■□□□□ 0.14
TMEM53-208ENST00000476724 LIN28AQ9H9Z2 209 aaKnown RBP15.92■□□□□ 0.14
TMEM53-208ENST00000476724 AASDHPPTQ9NRN7 309 aa15.92■□□□□ 0.14
TMEM53-208ENST00000476724 IL36AQ9UHA7 158 aa15.92■□□□□ 0.14
TMEM53-208ENST00000476724 CLIC1O00299 241 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 FPGTO14772 594 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 CLGNO14967 610 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 ABCB7O75027 752 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 ATG13O75143 517 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 LRATO95237 230 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 ADH1CP00326 375 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 MYCLP1P12525 358 aaPredicted RBP15.91■□□□□ 0.14
TMEM53-208ENST00000476724 CRHBPP24387 322 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 RPS6KA3P51812 740 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 IST1P53990 364 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 GABARAPL2P60520 117 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 HPCAP84074 193 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 SYTL3Q4VX76 610 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 CES5AQ6NT32 575 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 TMEM184AQ6ZMB5 413 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 TECPR1Q7Z6L1 1165 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 ETFBKMTQ8IXQ9 262 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 NXPE3Q969Y0 559 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 MBOAT4Q96T53 435 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 CCM2Q9BSQ5 444 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 REXO4Q9GZR2 422 aaKnown RBP15.91■□□□□ 0.14
TMEM53-208ENST00000476724 ETAA1Q9NY74 926 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 RPS6KA6Q9UK32 745 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 CDC14AQ9UNH5 594 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 UNC80Q8N2C7 3258 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 TRIM64BA6NI03 449 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 OR2AG2A6NM03 316 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 ARHGEF33A8MVX0 844 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 FADS2P1A8MWK0 482 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 PRRT4C9JH25 899 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 NOL3O60936 208 aaKnown RBP15.91■□□□□ 0.14
TMEM53-208ENST00000476724 EPN2O95208 641 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 ASMTP46597 345 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 YAP1P46937 504 aaKnown RBP15.91■□□□□ 0.14
TMEM53-208ENST00000476724 PRLHRP49683 370 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 ARHGDIAP52565 204 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 ACSM2AQ08AH3 577 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 KCNAB2Q13303 367 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 DOC2AQ14183 400 aa15.91■□□□□ 0.14
TMEM53-208ENST00000476724 SLC44A4Q53GD3 710 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms