RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 A6NCN8 305 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 RSL1D1O76021 490 aaKnown RBP11.8□□□□□ -0.52
MRPL55-227ENST00000475832 MYO1DO94832 1006 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 EPN2O95208 641 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 PCNAP12004 261 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 SLC19A1P41440 591 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 ARRB1P49407 418 aaPredicted RBP11.8□□□□□ -0.52
MRPL55-227ENST00000475832 CSNK1EP49674 416 aaKnown RBP11.8□□□□□ -0.52
MRPL55-227ENST00000475832 SPEM2Q0P670 501 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 GRIK2Q13002 908 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 KLF10Q13118 480 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 C1orf61Q13536 156 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 SLBPQ14493 270 aaKnown RBP eCLIP11.8□□□□□ -0.52
MRPL55-227ENST00000475832 ABRAXAS2Q15018 415 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 ZXDCQ2QGD7 858 aaPredicted RBP11.8□□□□□ -0.52
MRPL55-227ENST00000475832 GLIPR1L2Q4G1C9 344 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 PLA2G2CQ5R387 149 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 CACHD1Q5VU97 1274 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 KLHL35Q6PF15 583 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 SCIMPQ6UWF3 145 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 CHSY3Q70JA7 882 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 MIER2Q8N344 545 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 C2orf73Q8N5S3 287 aaPredicted RBP11.8□□□□□ -0.52
MRPL55-227ENST00000475832 C3orf30Q96M34 536 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 LRRC61Q9BV99 259 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 TCEAL2Q9H3H9 227 aaPredicted RBP11.8□□□□□ -0.52
MRPL55-227ENST00000475832 ERVMER34-1Q9H9K5 563 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 BRF2Q9HAW0 419 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 LRTM1Q9HBL6 345 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 PARD6AQ9NPB6 346 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 CPNE7Q9UBL6 633 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 SLC12A4Q9UP95 1085 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 ICKQ9UPZ9 632 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 TMED5Q9Y3A6 229 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 PCDHGA5Q9Y5G8 931 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 ST14Q9Y5Y6 855 aa11.8□□□□□ -0.52
MRPL55-227ENST00000475832 TRBV23OR9-2A0A075B6M9 112 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 KCNE1BA0A087WTH5 132 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 CAPN14A8MX76 684 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 ISM1B1AKI9 464 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 B4DGG1 531 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 PSMD12O00232 456 aaPredicted RBP11.79□□□□□ -0.52
MRPL55-227ENST00000475832 AQP9O43315 295 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 SEC22BO75396 215 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 FKBP9O95302 570 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 PDYNP01213 254 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 CDH1P12830 882 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 PIK3R1P27986 724 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 HTR6P50406 440 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 SHC2P98077 582 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 EMX2Q04743 252 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 PRDX1Q06830 199 aaKnown RBP11.79□□□□□ -0.52
MRPL55-227ENST00000475832 STX5Q13190 355 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 KIR2DS3Q14952 304 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 HERC3Q15034 1050 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 SF1Q15637 639 aaKnown RBP11.79□□□□□ -0.52
MRPL55-227ENST00000475832 AP5B1Q2VPB7 878 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 TCHHL1Q5QJ38 904 aaPredicted RBP11.79□□□□□ -0.52
MRPL55-227ENST00000475832 C6orf136Q5SQH8 315 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 ICE2Q659A1 982 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 TMEM198Q66K66 360 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 ARMC6Q6NXE6 501 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 ADCK2Q7Z695 626 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 ABCA7Q8IZY2 2146 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 TTLQ8NG68 377 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 RP9Q8TA86 221 aaKnown RBP11.79□□□□□ -0.52
MRPL55-227ENST00000475832 C1orf216Q8TAB5 229 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 KLHL29Q96CT2 875 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 MTFMTQ96DP5 389 aaKnown RBP11.79□□□□□ -0.52
MRPL55-227ENST00000475832 METTL2AQ96IZ6 378 aaKnown RBP11.79□□□□□ -0.52
MRPL55-227ENST00000475832 ACAT2Q9BWD1 397 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.79□□□□□ -0.52
MRPL55-227ENST00000475832 XKR8Q9H6D3 395 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 SLC40A1Q9NP59 571 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 MRPS30Q9NP92 439 aaKnown RBP11.79□□□□□ -0.52
MRPL55-227ENST00000475832 TMEM45AQ9NWC5 275 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 C1orf109Q9NX04 203 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 NOP53Q9NZM5 478 aaKnown RBP11.79□□□□□ -0.52
MRPL55-227ENST00000475832 ZNF624Q9P2J8 865 aaPredicted RBP11.79□□□□□ -0.52
MRPL55-227ENST00000475832 KLF15Q9UIH9 416 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 PNMA8BQ9ULN7 279 aaPredicted RBP11.79□□□□□ -0.52
MRPL55-227ENST00000475832 SNX7Q9UNH6 387 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 ENTPD2Q9Y5L3 495 aa11.79□□□□□ -0.52
MRPL55-227ENST00000475832 COPG1Q9Y678 874 aaKnown RBP11.79□□□□□ -0.52
MRPL55-227ENST00000475832 CNOT1A5YKK6 2376 aaKnown RBP11.78□□□□□ -0.52
MRPL55-227ENST00000475832 SDK1Q7Z5N4 2213 aa11.78□□□□□ -0.52
MRPL55-227ENST00000475832 PIPSLA2A3N6 862 aa11.78□□□□□ -0.52
MRPL55-227ENST00000475832 ANKDD1BA6NHY2 528 aa11.78□□□□□ -0.52
MRPL55-227ENST00000475832 LMO7DNF2Z398 122 aa11.78□□□□□ -0.52
MRPL55-227ENST00000475832 FOXE1O00358 373 aaPredicted RBP11.78□□□□□ -0.52
MRPL55-227ENST00000475832 LSM1O15116 133 aaKnown RBP11.78□□□□□ -0.52
MRPL55-227ENST00000475832 DFNA5O60443 496 aa11.78□□□□□ -0.52
MRPL55-227ENST00000475832 CBX6O95503 412 aa11.78□□□□□ -0.52
MRPL55-227ENST00000475832 EML2O95834 649 aa11.78□□□□□ -0.52
MRPL55-227ENST00000475832 CHRM5P08912 532 aaPredicted RBP11.78□□□□□ -0.52
MRPL55-227ENST00000475832 PRR35P0CG20 571 aa11.78□□□□□ -0.52
MRPL55-227ENST00000475832 VARSP26640 1264 aaKnown RBP11.78□□□□□ -0.52
MRPL55-227ENST00000475832 GSTM2P28161 218 aa11.78□□□□□ -0.52
MRPL55-227ENST00000475832 HOXD12P35452 270 aa11.78□□□□□ -0.52
MRPL55-227ENST00000475832 PIK3CBP42338 1070 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms