RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 INHBBP09529 407 aa13.42□□□□□ -0.26
ATG9A-220ENST00000475339 C2orf54Q08AI8 447 aa13.42□□□□□ -0.26
ATG9A-220ENST00000475339 KRT33BQ14525 404 aa13.42□□□□□ -0.26
ATG9A-220ENST00000475339 DEFB110Q30KQ9 67 aa13.42□□□□□ -0.26
ATG9A-220ENST00000475339 METRNLQ641Q3 311 aa13.42□□□□□ -0.26
ATG9A-220ENST00000475339 KIAA0930Q6ICG6 404 aaPredicted RBP13.42□□□□□ -0.26
ATG9A-220ENST00000475339 SHISA6Q6ZSJ9 500 aa13.42□□□□□ -0.26
ATG9A-220ENST00000475339 SDCCAG8Q86SQ7 713 aaPredicted RBP13.42□□□□□ -0.26
ATG9A-220ENST00000475339 DMRTC2Q8IXT2 367 aaPredicted RBP13.42□□□□□ -0.26
ATG9A-220ENST00000475339 ZNF655Q8N720 491 aaPredicted RBP13.42□□□□□ -0.26
ATG9A-220ENST00000475339 WFDC11Q8NEX6 87 aa13.42□□□□□ -0.26
ATG9A-220ENST00000475339 SPATA4Q8NEY3 305 aa13.42□□□□□ -0.26
ATG9A-220ENST00000475339 SPDYE1Q8NFV5 336 aaPredicted RBP13.42□□□□□ -0.26
ATG9A-220ENST00000475339 ZNF592Q92610 1267 aa13.42□□□□□ -0.26
ATG9A-220ENST00000475339 N4BP2L2Q92802 583 aaPredicted RBP13.42□□□□□ -0.26
ATG9A-220ENST00000475339 PITPNM3Q9BZ71 974 aa13.42□□□□□ -0.26
ATG9A-220ENST00000475339 TRIM31Q9BZY9 425 aa13.42□□□□□ -0.26
ATG9A-220ENST00000475339 WWP1Q9H0M0 922 aa13.42□□□□□ -0.26
ATG9A-220ENST00000475339 COG4Q9H9E3 785 aa13.42□□□□□ -0.26
ATG9A-220ENST00000475339 FAM60AQ9NP50 221 aa13.42□□□□□ -0.26
ATG9A-220ENST00000475339 TXLNGQ9NUQ3 528 aa13.42□□□□□ -0.26
ATG9A-220ENST00000475339 DNAJB12Q9NXW2 375 aaKnown RBP13.42□□□□□ -0.26
ATG9A-220ENST00000475339 KCNN3Q9UGI6 736 aa13.42□□□□□ -0.26
ATG9A-220ENST00000475339 PLEKHA6Q9Y2H5 1048 aa13.42□□□□□ -0.26
ATG9A-220ENST00000475339 TLN2Q9Y4G6 2542 aa13.42□□□□□ -0.26
ATG9A-220ENST00000475339 GTF3C1Q12789 2109 aa13.42□□□□□ -0.26
ATG9A-220ENST00000475339 FAM237BA0A1B0GVD1 139 aa13.41□□□□□ -0.26
ATG9A-220ENST00000475339 SMAPO00193 183 aa13.41□□□□□ -0.26
ATG9A-220ENST00000475339 ZSCAN9O15535 394 aaPredicted RBP13.41□□□□□ -0.26
ATG9A-220ENST00000475339 PROM1O43490 865 aa13.41□□□□□ -0.26
ATG9A-220ENST00000475339 SGTAO43765 313 aa13.41□□□□□ -0.26
ATG9A-220ENST00000475339 OR1I1O60431 355 aa13.41□□□□□ -0.26
ATG9A-220ENST00000475339 HEXAP06865 529 aa13.41□□□□□ -0.26
ATG9A-220ENST00000475339 PCSK6P29122 969 aa13.41□□□□□ -0.26
ATG9A-220ENST00000475339 SOX11P35716 441 aa13.41□□□□□ -0.26
ATG9A-220ENST00000475339 MYBPHQ13203 477 aa13.41□□□□□ -0.26
ATG9A-220ENST00000475339 THOC5Q13769 683 aaKnown RBP13.41□□□□□ -0.26
ATG9A-220ENST00000475339 MORF4L2Q15014 288 aa13.41□□□□□ -0.26
ATG9A-220ENST00000475339 RNF187Q5TA31 235 aaPredicted RBP13.41□□□□□ -0.26
ATG9A-220ENST00000475339 MAATS1Q7Z4T9 603 aa13.41□□□□□ -0.26
ATG9A-220ENST00000475339 LDB1Q86U70 411 aaPredicted RBP13.41□□□□□ -0.26
ATG9A-220ENST00000475339 AGAP11Q8TF27 550 aa13.41□□□□□ -0.26
ATG9A-220ENST00000475339 PHF10Q8WUB8 498 aaKnown RBP13.41□□□□□ -0.26
ATG9A-220ENST00000475339 PSMF1Q92530 271 aa13.41□□□□□ -0.26
ATG9A-220ENST00000475339 ELMO1Q92556 727 aa13.41□□□□□ -0.26
ATG9A-220ENST00000475339 SNF8Q96H20 258 aa13.41□□□□□ -0.26
ATG9A-220ENST00000475339 C12orf66Q96MD2 445 aa13.41□□□□□ -0.26
ATG9A-220ENST00000475339 ALPK1Q96QP1 1244 aa13.41□□□□□ -0.26
ATG9A-220ENST00000475339 NRTNQ99748 197 aa13.41□□□□□ -0.26
ATG9A-220ENST00000475339 ZNF160Q9HCG1 818 aa13.41□□□□□ -0.26
ATG9A-220ENST00000475339 MARCH4Q9P2E8 410 aaPredicted RBP13.41□□□□□ -0.26
ATG9A-220ENST00000475339 PRSS21Q9Y6M0 314 aa13.41□□□□□ -0.26
ATG9A-220ENST00000475339 EFCAB8A8MWE9 144 aa13.4□□□□□ -0.26
ATG9A-220ENST00000475339 GOLGA8KD6RF30 607 aa13.4□□□□□ -0.26
ATG9A-220ENST00000475339 GOLGA8TH3BQL2 631 aa13.4□□□□□ -0.26
ATG9A-220ENST00000475339 KIF2AO00139 706 aaPredicted RBP13.4□□□□□ -0.26
ATG9A-220ENST00000475339 MATN2O00339 956 aa13.4□□□□□ -0.26
ATG9A-220ENST00000475339 BTN3A3O00478 584 aa13.4□□□□□ -0.26
ATG9A-220ENST00000475339 PRMT5O14744 637 aaPredicted RBP13.4□□□□□ -0.26
ATG9A-220ENST00000475339 URI1O94763 535 aaPredicted RBP13.4□□□□□ -0.26
ATG9A-220ENST00000475339 PGAM1P18669 254 aa13.4□□□□□ -0.26
ATG9A-220ENST00000475339 MAGEA3P43357 314 aa13.4□□□□□ -0.26
ATG9A-220ENST00000475339 RPA4Q13156 261 aa13.4□□□□□ -0.26
ATG9A-220ENST00000475339 BOP1Q14137 746 aaKnown RBP13.4□□□□□ -0.26
ATG9A-220ENST00000475339 SEMA3AQ14563 771 aa13.4□□□□□ -0.26
ATG9A-220ENST00000475339 RBBP7Q16576 425 aa13.4□□□□□ -0.26
ATG9A-220ENST00000475339 NKG7Q16617 165 aa13.4□□□□□ -0.26
ATG9A-220ENST00000475339 BBS9Q3SYG4 887 aa13.4□□□□□ -0.26
ATG9A-220ENST00000475339 ANKRD20A4Q4UJ75 823 aa13.4□□□□□ -0.26
ATG9A-220ENST00000475339 PTRHD1Q6GMV3 140 aaKnown RBP13.4□□□□□ -0.26
ATG9A-220ENST00000475339 PDIK1LQ8N165 341 aa13.4□□□□□ -0.26
ATG9A-220ENST00000475339 BRIX1Q8TDN6 353 aaKnown RBP13.4□□□□□ -0.26
ATG9A-220ENST00000475339 THAP3Q8WTV1 239 aaPredicted RBP13.4□□□□□ -0.26
ATG9A-220ENST00000475339 DMRTA2Q96SC8 542 aa13.4□□□□□ -0.26
ATG9A-220ENST00000475339 SPSB2Q99619 263 aa13.4□□□□□ -0.26
ATG9A-220ENST00000475339 TSPAN10Q9H1Z9 355 aaPredicted RBP13.4□□□□□ -0.26
ATG9A-220ENST00000475339 SRMSQ9H3Y6 488 aa13.4□□□□□ -0.26
ATG9A-220ENST00000475339 SOX17Q9H6I2 414 aaPredicted RBP13.4□□□□□ -0.26
ATG9A-220ENST00000475339 ZNF358Q9NW07 568 aa13.4□□□□□ -0.26
ATG9A-220ENST00000475339 COQ3Q9NZJ6 369 aa13.4□□□□□ -0.26
ATG9A-220ENST00000475339 GNPTGQ9UJJ9 305 aa13.4□□□□□ -0.26
ATG9A-220ENST00000475339 PPT2Q9UMR5 302 aa13.4□□□□□ -0.26
ATG9A-220ENST00000475339 HEBP2Q9Y5Z4 205 aa13.4□□□□□ -0.26
ATG9A-220ENST00000475339 HCFC1P51610 2035 aa13.39□□□□□ -0.27
ATG9A-220ENST00000475339 NKX2-6A6NCS4 301 aa13.39□□□□□ -0.27
ATG9A-220ENST00000475339 FAM187AA6NFU0 413 aa13.39□□□□□ -0.27
ATG9A-220ENST00000475339 FAM227AF5H4B4 570 aa13.39□□□□□ -0.27
ATG9A-220ENST00000475339 ADAM10O14672 748 aa13.39□□□□□ -0.27
ATG9A-220ENST00000475339 LIN7AO14910 233 aaPredicted RBP13.39□□□□□ -0.27
ATG9A-220ENST00000475339 USP1O94782 785 aa13.39□□□□□ -0.27
ATG9A-220ENST00000475339 SEC31AO94979 1220 aaKnown RBP13.39□□□□□ -0.27
ATG9A-220ENST00000475339 WDPCPO95876 746 aa13.39□□□□□ -0.27
ATG9A-220ENST00000475339 TUBB4AP04350 444 aa13.39□□□□□ -0.27
ATG9A-220ENST00000475339 ITGAXP20702 1163 aa13.39□□□□□ -0.27
ATG9A-220ENST00000475339 ALAS2P22557 587 aa13.39□□□□□ -0.27
ATG9A-220ENST00000475339 DNASE1P24855 282 aa13.39□□□□□ -0.27
ATG9A-220ENST00000475339 DGKQP52824 942 aa13.39□□□□□ -0.27
ATG9A-220ENST00000475339 ITGA8P53708 1063 aa13.39□□□□□ -0.27
ATG9A-220ENST00000475339 EIF3BP55884 814 aaKnown RBP13.39□□□□□ -0.27
ATG9A-220ENST00000475339 ARL4CP56559 192 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms