RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 ARL15Q9NXU5 204 aa19.55■□□□□ 0.72
SNX13-206ENST00000474067 PDE10AQ9Y233 779 aa19.55■□□□□ 0.72
SNX13-206ENST00000474067 SNX24Q9Y343 169 aa19.55■□□□□ 0.72
SNX13-206ENST00000474067 FDXRP22570 491 aa19.54■□□□□ 0.72
SNX13-206ENST00000474067 AVPR1BP47901 424 aa19.54■□□□□ 0.72
SNX13-206ENST00000474067 FAM53BQ14153 422 aa19.54■□□□□ 0.72
SNX13-206ENST00000474067 HP1BP3Q5SSJ5 553 aaPredicted RBP19.54■□□□□ 0.72
SNX13-206ENST00000474067 DUPD1Q68J44 220 aa19.54■□□□□ 0.72
SNX13-206ENST00000474067 NIPAL1Q6NVV3 410 aa19.54■□□□□ 0.72
SNX13-206ENST00000474067 FBXO42Q6P3S6 717 aa19.54■□□□□ 0.72
SNX13-206ENST00000474067 AGTRAPQ6RW13 159 aa19.54■□□□□ 0.72
SNX13-206ENST00000474067 LCTLQ6UWM7 567 aa19.54■□□□□ 0.72
SNX13-206ENST00000474067 IGDCC3Q8IVU1 814 aa19.54■□□□□ 0.72
SNX13-206ENST00000474067 GALNT16Q8N428 558 aa19.54■□□□□ 0.72
SNX13-206ENST00000474067 CAMKVQ8NCB2 501 aa19.54■□□□□ 0.72
SNX13-206ENST00000474067 FDCSPQ8NFU4 85 aa19.54■□□□□ 0.72
SNX13-206ENST00000474067 TSPAN17Q96FV3 270 aa19.54■□□□□ 0.72
SNX13-206ENST00000474067 SMAD5Q99717 465 aaKnown RBP19.54■□□□□ 0.72
SNX13-206ENST00000474067 DRC3Q9H069 523 aa19.54■□□□□ 0.72
SNX13-206ENST00000474067 POPDC3Q9HBV1 291 aa19.54■□□□□ 0.72
SNX13-206ENST00000474067 NOVA2Q9UNW9 492 aaKnown RBP19.54■□□□□ 0.72
SNX13-206ENST00000474067 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.54■□□□□ 0.72
SNX13-206ENST00000474067 KCNE1BA0A087WTH5 132 aa19.53■□□□□ 0.72
SNX13-206ENST00000474067 KRT87PA6NCN2 255 aa19.53■□□□□ 0.72
SNX13-206ENST00000474067 CTSBP07858 339 aa19.53■□□□□ 0.72
SNX13-206ENST00000474067 ATXN8OSP0DMR3 200 aa19.53■□□□□ 0.72
SNX13-206ENST00000474067 CXCR2P25025 360 aa19.53■□□□□ 0.72
SNX13-206ENST00000474067 GABRB3P28472 473 aa19.53■□□□□ 0.72
SNX13-206ENST00000474067 RPL21P46778 160 aaKnown RBP19.53■□□□□ 0.72
SNX13-206ENST00000474067 CDKN2DP55273 166 aa19.53■□□□□ 0.72
SNX13-206ENST00000474067 SOX8P57073 446 aa19.53■□□□□ 0.72
SNX13-206ENST00000474067 DSG2Q14126 1118 aa19.53■□□□□ 0.72
SNX13-206ENST00000474067 MYBPC3Q14896 1274 aa19.53■□□□□ 0.72
SNX13-206ENST00000474067 TUBB8Q3ZCM7 444 aa19.53■□□□□ 0.72
SNX13-206ENST00000474067 RBM20Q5T481 1227 aaKnown RBP19.53■□□□□ 0.72
SNX13-206ENST00000474067 STRA8Q7Z7C7 330 aa19.53■□□□□ 0.72
SNX13-206ENST00000474067 ANKMY2Q8IV38 441 aa19.53■□□□□ 0.72
SNX13-206ENST00000474067 OR2A5Q96R48 311 aa19.53■□□□□ 0.72
SNX13-206ENST00000474067 CRB3Q9BUF7 120 aa19.53■□□□□ 0.72
SNX13-206ENST00000474067 TRIM4Q9C037 500 aa19.53■□□□□ 0.72
SNX13-206ENST00000474067 MKKSQ9NPJ1 570 aaPredicted RBP19.53■□□□□ 0.72
SNX13-206ENST00000474067 LOC105369274A0A096LPK9 316 aa19.52■□□□□ 0.72
SNX13-206ENST00000474067 LOC102723532A0A0G2JNH3 316 aa19.52■□□□□ 0.72
SNX13-206ENST00000474067 H7BY64 318 aa19.52■□□□□ 0.72
SNX13-206ENST00000474067 CYC1P08574 325 aa19.52■□□□□ 0.72
SNX13-206ENST00000474067 SLC35G6P0C7Q6 338 aa19.52■□□□□ 0.72
SNX13-206ENST00000474067 OR1D4P47884 311 aa19.52■□□□□ 0.72
SNX13-206ENST00000474067 CEP128Q6ZU80 1094 aa19.52■□□□□ 0.72
SNX13-206ENST00000474067 CYS1Q717R9 158 aa19.52■□□□□ 0.72
SNX13-206ENST00000474067 LRRC56Q8IYG6 542 aaPredicted RBP19.52■□□□□ 0.72
SNX13-206ENST00000474067 OR4N4Q8N0Y3 316 aa19.52■□□□□ 0.72
SNX13-206ENST00000474067 MMABQ96EY8 250 aaPredicted RBP19.52■□□□□ 0.72
SNX13-206ENST00000474067 PRAP1Q96NZ9 151 aa19.52■□□□□ 0.72
SNX13-206ENST00000474067 SPSB2Q99619 263 aa19.52■□□□□ 0.72
SNX13-206ENST00000474067 RHOJQ9H4E5 214 aa19.52■□□□□ 0.72
SNX13-206ENST00000474067 SLC22A11Q9NSA0 550 aa19.52■□□□□ 0.72
SNX13-206ENST00000474067 MOCS1Q9NZB8 636 aa19.52■□□□□ 0.72
SNX13-206ENST00000474067 RUVBL1Q9Y265 456 aaKnown RBP19.52■□□□□ 0.72
SNX13-206ENST00000474067 IGKV1-8A0A0C4DH67 115 aa19.51■□□□□ 0.71
SNX13-206ENST00000474067 FAM95CA0A1B0GW59 222 aa19.51■□□□□ 0.71
SNX13-206ENST00000474067 A6NL46 340 aa19.51■□□□□ 0.71
SNX13-206ENST00000474067 VSTM2BA6NLU5 285 aa19.51■□□□□ 0.71
SNX13-206ENST00000474067 TTLL8A6PVC2 850 aa19.51■□□□□ 0.71
SNX13-206ENST00000474067 H0YIG0 161 aa19.51■□□□□ 0.71
SNX13-206ENST00000474067 MAP2K7O14733 419 aa19.51■□□□□ 0.71
SNX13-206ENST00000474067 UMODP07911 640 aa19.51■□□□□ 0.71
SNX13-206ENST00000474067 F7P08709 466 aaPredicted RBP19.51■□□□□ 0.71
SNX13-206ENST00000474067 ZGLP1P0C6A0 271 aa19.51■□□□□ 0.71
SNX13-206ENST00000474067 ZNF37AP17032 561 aaPredicted RBP19.51■□□□□ 0.71
SNX13-206ENST00000474067 HNMTP50135 292 aa19.51■□□□□ 0.71
SNX13-206ENST00000474067 NAE1Q13564 534 aa19.51■□□□□ 0.71
SNX13-206ENST00000474067 TRMT10BQ6PF06 316 aaKnown RBP19.51■□□□□ 0.71
SNX13-206ENST00000474067 FRA10AC1Q70Z53 315 aa19.51■□□□□ 0.71
SNX13-206ENST00000474067 PPP1R32Q7Z5V6 425 aa19.51■□□□□ 0.71
SNX13-206ENST00000474067 ADAMTSL2Q86TH1 951 aa19.51■□□□□ 0.71
SNX13-206ENST00000474067 ZC3HC1Q86WB0 502 aaKnown RBP19.51■□□□□ 0.71
SNX13-206ENST00000474067 STT3BQ8TCJ2 826 aa19.51■□□□□ 0.71
SNX13-206ENST00000474067 YIPF2Q9BWQ6 316 aa19.51■□□□□ 0.71
SNX13-206ENST00000474067 SGPP1Q9BX95 441 aa19.51■□□□□ 0.71
SNX13-206ENST00000474067 SOX17Q9H6I2 414 aaPredicted RBP19.51■□□□□ 0.71
SNX13-206ENST00000474067 SLAMF7Q9NQ25 335 aa19.51■□□□□ 0.71
SNX13-206ENST00000474067 MAP4K5Q9Y4K4 846 aa19.51■□□□□ 0.71
SNX13-206ENST00000474067 MAU2Q9Y6X3 613 aa19.51■□□□□ 0.71
SNX13-206ENST00000474067 IGLV3-12A0A075B6K2 115 aa19.5■□□□□ 0.71
SNX13-206ENST00000474067 HAT1O14929 419 aa19.5■□□□□ 0.71
SNX13-206ENST00000474067 NR1D1P20393 614 aa19.5■□□□□ 0.71
SNX13-206ENST00000474067 ITGA3P26006 1051 aa19.5■□□□□ 0.71
SNX13-206ENST00000474067 CCR8P51685 355 aa19.5■□□□□ 0.71
SNX13-206ENST00000474067 FOXK1P85037 733 aa19.5■□□□□ 0.71
SNX13-206ENST00000474067 POU4F1Q01851 419 aa19.5■□□□□ 0.71
SNX13-206ENST00000474067 FAM69BQ5VUD6 431 aa19.5■□□□□ 0.71
SNX13-206ENST00000474067 SYT10Q6XYQ8 523 aa19.5■□□□□ 0.71
SNX13-206ENST00000474067 COX15Q7KZN9 410 aa19.5■□□□□ 0.71
SNX13-206ENST00000474067 ZADH2Q8N4Q0 377 aa19.5■□□□□ 0.71
SNX13-206ENST00000474067 ALKBH8Q96BT7 664 aaKnown RBP19.5■□□□□ 0.71
SNX13-206ENST00000474067 FBXL8Q96CD0 374 aa19.5■□□□□ 0.71
SNX13-206ENST00000474067 C10orf90Q96M02 699 aa19.5■□□□□ 0.71
SNX13-206ENST00000474067 NUDT9Q9BW91 350 aa19.5■□□□□ 0.71
SNX13-206ENST00000474067 TGIF2Q9GZN2 237 aa19.5■□□□□ 0.71
SNX13-206ENST00000474067 ATG10Q9H0Y0 220 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms