RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	CNIH4	Q9P003	139 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	GPR132	Q9UNW8	380 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	CHKB	Q9Y259	395 aa		4.22	□□□□□ -1.73
BBX-223	ENST00000473542	NPIPA3	F8WFD2	350 aa		4.21	□□□□□ -1.74
BBX-223	ENST00000473542	KLF11	O14901	512 aa		4.21	□□□□□ -1.74
BBX-223	ENST00000473542	RTN2	O75298	545 aa		4.21	□□□□□ -1.74
BBX-223	ENST00000473542	RAD51D	O75771	328 aa		4.21	□□□□□ -1.74
BBX-223	ENST00000473542	CDK2AP2	O75956	126 aa		4.21	□□□□□ -1.74
BBX-223	ENST00000473542	SERPING1	P05155	500 aa		4.21	□□□□□ -1.74
BBX-223	ENST00000473542	CD27	P26842	260 aa		4.21	□□□□□ -1.74
BBX-223	ENST00000473542	CCND3	P30281	292 aa	Predicted RBP	4.21	□□□□□ -1.74
BBX-223	ENST00000473542	KCNJ1	P48048	391 aa		4.21	□□□□□ -1.74
BBX-223	ENST00000473542	NPBWR1	P48145	328 aa		4.21	□□□□□ -1.74
BBX-223	ENST00000473542	ARHGAP1	Q07960	439 aa		4.21	□□□□□ -1.74
BBX-223	ENST00000473542	HERC3	Q15034	1050 aa		4.21	□□□□□ -1.74
BBX-223	ENST00000473542	CDC37	Q16543	378 aa	Predicted RBP	4.21	□□□□□ -1.74
BBX-223	ENST00000473542	CCDC158	Q5M9N0	1113 aa		4.21	□□□□□ -1.74
BBX-223	ENST00000473542	RBMS3	Q6XE24	437 aa	Known RBP	4.21	□□□□□ -1.74
BBX-223	ENST00000473542	RAPH1	Q70E73	1250 aa		4.21	□□□□□ -1.74
BBX-223	ENST00000473542	TRPT1	Q86TN4	253 aa	Known RBP	4.21	□□□□□ -1.74
BBX-223	ENST00000473542	APCDD1	Q8J025	514 aa		4.21	□□□□□ -1.74
BBX-223	ENST00000473542	OR13C3	Q8NGS6	347 aa		4.21	□□□□□ -1.74
BBX-223	ENST00000473542	UBLCP1	Q8WVY7	318 aa	Predicted RBP	4.21	□□□□□ -1.74
BBX-223	ENST00000473542	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	4.21	□□□□□ -1.74
BBX-223	ENST00000473542	KLK4	Q9Y5K2	254 aa		4.21	□□□□□ -1.74
BBX-223	ENST00000473542	C13orf42	A0A1B0GVH6	325 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	C17orf105	B2RV13	164 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	KRT86	O43790	486 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	PRSS1	P07477	247 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	ANKRD34C	P0C6C1	535 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	CD59	P13987	128 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	MT3	P25713	68 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	ALDH4A1	P30038	563 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	CEACAM8	P31997	349 aa	Predicted RBP	4.2	□□□□□ -1.74
BBX-223	ENST00000473542	HNF4A	P41235	474 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	RCN2	Q14257	317 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	KRT81	Q14533	505 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	OPCML	Q14982	345 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	P2RY6	Q15077	328 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	RBBP5	Q15291	538 aa	Known RBP	4.2	□□□□□ -1.74
BBX-223	ENST00000473542	IQCC	Q4KMZ1	466 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	UGT3A1	Q6NUS8	523 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	FUT10	Q6P4F1	479 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	MARK2	Q7KZI7	788 aa	Known RBP	4.2	□□□□□ -1.74
BBX-223	ENST00000473542	PIGZ	Q86VD9	579 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	ANKRD46	Q86W74	232 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	PRSS35	Q8N3Z0	413 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	STPG4	Q8N801	248 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	LMLN	Q96KR4	655 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	C4orf45	Q96LM5	186 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	KLHL5	Q96PQ7	755 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	CDCA3	Q99618	268 aa	Predicted RBP	4.2	□□□□□ -1.74
BBX-223	ENST00000473542	FAM49A	Q9H0Q0	323 aa	Predicted RBP	4.2	□□□□□ -1.74
BBX-223	ENST00000473542	C10orf88	Q9H8K7	445 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	IARS2	Q9NSE4	1012 aa	Known RBP	4.2	□□□□□ -1.74
BBX-223	ENST00000473542	C2orf42	Q9NWW7	574 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542	ZNF624	Q9P2J8	865 aa	Predicted RBP	4.2	□□□□□ -1.74
BBX-223	ENST00000473542	RIPK3	Q9Y572	518 aa		4.2	□□□□□ -1.74
BBX-223	ENST00000473542		A0A0G2JLW4	131 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	TRBV5-5	A0A0J9YX44	114 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	FAM149A	A5PLN7	773 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	IFITM10	A6NMD0	228 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	SMIM1	B2RUZ4	78 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	PCDH7	O60245	1069 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	CLPTM1	O96005	669 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	PAK4	O96013	591 aa	Predicted RBP	4.19	□□□□□ -1.74
BBX-223	ENST00000473542	PNP	P00491	289 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	STAG3L1	P0CL83	205 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	SFTPD	P35247	375 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	CETN2	P41208	172 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	NKX2-1	P43699	371 aa	Predicted RBP	4.19	□□□□□ -1.74
BBX-223	ENST00000473542	KRTAP10-5	P60370	271 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	PHEX	P78562	749 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	MYL7	Q01449	175 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	FOLH1	Q04609	750 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	TEF	Q10587	303 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	KIAA1644	Q3SXP7	199 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	XKR3	Q5GH77	459 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	PLBD1	Q6P4A8	553 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	CTR9	Q6PD62	1173 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	PRSS55	Q6UWB4	352 aa	Predicted RBP	4.19	□□□□□ -1.74
BBX-223	ENST00000473542	TRMT1L	Q7Z2T5	733 aa	Known RBP	4.19	□□□□□ -1.74
BBX-223	ENST00000473542	RCOR2	Q8IZ40	523 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	KIRREL3	Q8IZU9	778 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	CCDC63	Q8NA47	563 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	SPC24	Q8NBT2	197 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	PSMA8	Q8TAA3	256 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	HPSE2	Q8WWQ2	592 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	DYRK2	Q92630	601 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	TMEM143	Q96AN5	459 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	PDLIM5	Q96HC4	596 aa	Known RBP	4.19	□□□□□ -1.74
BBX-223	ENST00000473542	TSSK2	Q96PF2	358 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	UHRF2	Q96PU4	802 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	NDN	Q99608	321 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	SHARPIN	Q9H0F6	387 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	MID1IP1	Q9NPA3	183 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	SIX2	Q9NPC8	291 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	GPR173	Q9NS66	373 aa		4.19	□□□□□ -1.74
BBX-223	ENST00000473542	C19orf25	Q9UFG5	118 aa	Predicted RBP	4.19	□□□□□ -1.74
BBX-223	ENST00000473542	IL36A	Q9UHA7	158 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms