RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 FBXO15Q8NCQ5 510 aaPredicted RBP11.02□□□□□ -0.65
CPNE1-222ENST00000473373 PRAP1Q96NZ9 151 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 PLCD4Q9BRC7 762 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 TRIM55Q9BYV6 548 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 SOX17Q9H6I2 414 aaPredicted RBP11.02□□□□□ -0.65
CPNE1-222ENST00000473373 ZNF304Q9HCX3 659 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 STOX2Q9P2F5 926 aaPredicted RBP11.02□□□□□ -0.65
CPNE1-222ENST00000473373 ANAPC2Q9UJX6 822 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 ADAMTS6Q9UKP5 1117 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 CDC14AQ9UNH5 594 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 PDE10AQ9Y233 779 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 MED16Q9Y2X0 877 aa11.02□□□□□ -0.65
CPNE1-222ENST00000473373 OR2A25A4D2G3 310 aa11.01□□□□□ -0.65
CPNE1-222ENST00000473373 HAX1O00165 279 aa11.01□□□□□ -0.65
CPNE1-222ENST00000473373 HAT1O14929 419 aa11.01□□□□□ -0.65
CPNE1-222ENST00000473373 EIF3HO15372 352 aaKnown RBP eCLIP11.01□□□□□ -0.65
CPNE1-222ENST00000473373 NRP2O60462 931 aa11.01□□□□□ -0.65
CPNE1-222ENST00000473373 SERPIND1P05546 499 aa11.01□□□□□ -0.65
CPNE1-222ENST00000473373 FDXRP22570 491 aa11.01□□□□□ -0.65
CPNE1-222ENST00000473373 GABRB3P28472 473 aa11.01□□□□□ -0.65
CPNE1-222ENST00000473373 SSTR1P30872 391 aa11.01□□□□□ -0.65
CPNE1-222ENST00000473373 YBX1P67809 324 aaKnown RBP11.01□□□□□ -0.65
CPNE1-222ENST00000473373 ZNF385CQ66K41 422 aaPredicted RBP11.01□□□□□ -0.65
CPNE1-222ENST00000473373 TCTN3Q6NUS6 607 aa11.01□□□□□ -0.65
CPNE1-222ENST00000473373 CYHR1Q6ZMK1 362 aa11.01□□□□□ -0.65
CPNE1-222ENST00000473373 SLC26A11Q86WA9 606 aa11.01□□□□□ -0.65
CPNE1-222ENST00000473373 LURAP1LQ8IV03 231 aa11.01□□□□□ -0.65
CPNE1-222ENST00000473373 PLD3Q8IV08 490 aa11.01□□□□□ -0.65
CPNE1-222ENST00000473373 NKAPQ8N5F7 415 aaKnown RBP11.01□□□□□ -0.65
CPNE1-222ENST00000473373 OR2Y1Q8NGV0 311 aa11.01□□□□□ -0.65
CPNE1-222ENST00000473373 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.01□□□□□ -0.65
CPNE1-222ENST00000473373 ATL1Q8WXF7 558 aa11.01□□□□□ -0.65
CPNE1-222ENST00000473373 FKBP10Q96AY3 582 aa11.01□□□□□ -0.65
CPNE1-222ENST00000473373 MIEF2Q96C03 454 aa11.01□□□□□ -0.65
CPNE1-222ENST00000473373 MMABQ96EY8 250 aaPredicted RBP11.01□□□□□ -0.65
CPNE1-222ENST00000473373 TSPAN17Q96FV3 270 aa11.01□□□□□ -0.65
CPNE1-222ENST00000473373 HAUS8Q9BT25 410 aa11.01□□□□□ -0.65
CPNE1-222ENST00000473373 GPAMQ9HCL2 828 aa11.01□□□□□ -0.65
CPNE1-222ENST00000473373 CUEDC1Q9NWM3 386 aaPredicted RBP11.01□□□□□ -0.65
CPNE1-222ENST00000473373 GPR83Q9NYM4 423 aa11.01□□□□□ -0.65
CPNE1-222ENST00000473373 NXT1Q9UKK6 140 aaKnown RBP11.01□□□□□ -0.65
CPNE1-222ENST00000473373 DYRK1BQ9Y463 629 aa11.01□□□□□ -0.65
CPNE1-222ENST00000473373 ZNF451Q9Y4E5 1061 aa11.01□□□□□ -0.65
CPNE1-222ENST00000473373 NPEPPSL1A6NEC2 478 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 E7ESA3 106 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 H3BMH7 237 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 FANCGO15287 622 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 KLHL41O60662 606 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 STATHP02808 62 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 ALPPP05187 535 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 CAPN1P07384 714 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 HRH2P25021 359 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 ITGA3P26006 1051 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 AVPR1BP47901 424 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 PGGT1BP53609 377 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 AP1S2P56377 157 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 RPS15AP62244 130 aaKnown RBP11□□□□□ -0.65
CPNE1-222ENST00000473373 SLC7A5Q01650 507 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 TLE1Q04724 770 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 ILF2Q12905 390 aaKnown RBP11□□□□□ -0.65
CPNE1-222ENST00000473373 USP10Q14694 798 aaKnown RBP11□□□□□ -0.65
CPNE1-222ENST00000473373 HKDC1Q2TB90 917 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 PRMT9Q6P2P2 845 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 C3orf62Q6ZUJ4 267 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 RAPH1Q70E73 1250 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 OVCH1Q7RTY7 1134 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 MRGPREQ86SM8 312 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 ZC3HC1Q86WB0 502 aaKnown RBP11□□□□□ -0.65
CPNE1-222ENST00000473373 PAQR7Q86WK9 346 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 PYCR2Q96C36 320 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 OLFM1Q99784 485 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 CRB3Q9BUF7 120 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 DRC3Q9H069 523 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 RHOJQ9H4E5 214 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 TMEM184CQ9NVA4 438 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 TRPC4Q9UBN4 977 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 CTNNAL1Q9UBT7 734 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 ZNF282Q9UDV7 671 aaPredicted RBP11□□□□□ -0.65
CPNE1-222ENST00000473373 RUVBL1Q9Y265 456 aaKnown RBP11□□□□□ -0.65
CPNE1-222ENST00000473373 PSAT1Q9Y617 370 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 SPTA1P02549 2419 aa11□□□□□ -0.65
CPNE1-222ENST00000473373 BOD1L1Q8NFC6 3051 aa10.99□□□□□ -0.65
CPNE1-222ENST00000473373 MAP2K7O14733 419 aa10.99□□□□□ -0.65
CPNE1-222ENST00000473373 PIAS1O75925 651 aa10.99□□□□□ -0.65
CPNE1-222ENST00000473373 ALBP02768 609 aa10.99□□□□□ -0.65
CPNE1-222ENST00000473373 S100BP04271 92 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-222ENST00000473373 ENO2P09104 434 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-222ENST00000473373 CDH1P12830 882 aa10.99□□□□□ -0.65
CPNE1-222ENST00000473373 ZNF37AP17032 561 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-222ENST00000473373 CXCR2P25025 360 aa10.99□□□□□ -0.65
CPNE1-222ENST00000473373 STX2P32856 288 aa10.99□□□□□ -0.65
CPNE1-222ENST00000473373 FOXL2P58012 376 aa10.99□□□□□ -0.65
CPNE1-222ENST00000473373 FRG1Q14331 258 aaKnown RBP10.99□□□□□ -0.65
CPNE1-222ENST00000473373 CSHL1Q14406 222 aa10.99□□□□□ -0.65
CPNE1-222ENST00000473373 ZNF460Q14592 562 aa10.99□□□□□ -0.65
CPNE1-222ENST00000473373 SLMAPQ14BN4 828 aa10.99□□□□□ -0.65
CPNE1-222ENST00000473373 UAP1Q16222 522 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-222ENST00000473373 PHKG1Q16816 387 aa10.99□□□□□ -0.65
CPNE1-222ENST00000473373 WHAMMP3Q1A5X7 153 aa10.99□□□□□ -0.65
CPNE1-222ENST00000473373 TUBB8Q3ZCM7 444 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms