RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 ARL15Q9NXU5 204 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 EURLQ9NYK6 297 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 CTNNAL1Q9UBT7 734 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 ASB1Q9Y576 335 aa12.57□□□□□ -0.4
TPM3-216ENST00000473036 CYSRT1A8MQ03 144 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 FOXO6A8MYZ6 492 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 TARM1B6A8C7 271 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 ZNF749O43361 778 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 CDH16O75309 829 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 SCRG1O75711 98 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 KRT38O76015 456 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 INHBAP08476 426 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 ENO2P09104 434 aaPredicted RBP12.56□□□□□ -0.4
TPM3-216ENST00000473036 LIFP15018 202 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 ITGAXP20702 1163 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 CRABP2P29373 138 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 GDF5P43026 501 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 SLC6A12P48065 614 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 ITGA1P56199 1179 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 AP1S2P56377 157 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 SRSF1Q07955 248 aaKnown RBP eCLIP12.56□□□□□ -0.42e-7■□□□□ 8.7
TPM3-216ENST00000473036 CASP8Q14790 479 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 TGFBIQ15582 683 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 FAM199XQ6PEV8 388 aaPredicted RBP12.56□□□□□ -0.4
TPM3-216ENST00000473036 ADGRD1Q6QNK2 874 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 ZNF517Q6ZMY9 492 aaPredicted RBP12.56□□□□□ -0.4
TPM3-216ENST00000473036 RNF44Q7L0R7 432 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 PRICKLE2Q7Z3G6 844 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 TDRPQ86YL5 185 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 CACNA2D3Q8IZS8 1091 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 NLGN4XQ8N0W4 816 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 RAB42Q8N4Z0 105 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 GOLGA6L1Q8N7Z2 621 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 NLGN4YQ8NFZ3 816 aaPredicted RBP12.56□□□□□ -0.4
TPM3-216ENST00000473036 MZB1Q8WU39 189 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 KIAA1191Q96A73 305 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 RHBDF1Q96CC6 855 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 MTBPQ96DY7 904 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 ATOH8Q96SQ7 321 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 PLCD4Q9BRC7 762 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 TMEM79Q9BSE2 394 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 SPNS1Q9H2V7 528 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 MRPS30Q9NP92 439 aaKnown RBP12.56□□□□□ -0.4
TPM3-216ENST00000473036 CCDC177Q9NQR7 707 aaPredicted RBP12.56□□□□□ -0.4
TPM3-216ENST00000473036 ENAMQ9NRM1 1142 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 PCMTD2Q9NV79 361 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 ZNF180Q9UJW8 692 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 MRPS18BQ9Y676 258 aaKnown RBP12.56□□□□□ -0.4
TPM3-216ENST00000473036 FLNCQ14315 2725 aa12.56□□□□□ -0.4
TPM3-216ENST00000473036 A0A096LPK6 155 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 A0A0J9YVX5 310 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 NCF1BA6NI72 391 aaPredicted RBP12.55□□□□□ -0.4
TPM3-216ENST00000473036 NCF1CA8MVU1 366 aaPredicted RBP12.55□□□□□ -0.4
TPM3-216ENST00000473036 TRIM49D1C9J1S8 452 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 H7BY64 318 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 HAT1O14929 419 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 PRAMEF4O60810 478 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 RFPL1O75677 317 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 FKBP9O95302 570 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 CAPN1P07384 714 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 MTHFD2P13995 350 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 NCF1P14598 390 aaPredicted RBP12.55□□□□□ -0.4
TPM3-216ENST00000473036 CMPK1P30085 196 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 STAT5AP42229 794 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 CSNK1G2P78368 415 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 CDKL1Q00532 357 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 MAP7Q14244 749 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 PTCHD3Q3KNS1 767 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 PRAMEF9Q5VWM5 478 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 PRAMEF13Q5VWM6 474 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 C6orf15Q6UXA7 325 aaPredicted RBP12.55□□□□□ -0.4
TPM3-216ENST00000473036 RAPH1Q70E73 1250 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 CCDC91Q7Z6B0 441 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 ADAMTSL2Q86TH1 951 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 BPHLQ86WA6 291 aaPredicted RBP12.55□□□□□ -0.4
TPM3-216ENST00000473036 TMEM126BQ8IUX1 230 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 KLHDC8AQ8IYD2 350 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 SHISA5Q8N114 240 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 ARHGEF39Q8N4T4 335 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 OR8K5Q8NH50 307 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 ESAMQ96AP7 390 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 ALKBH8Q96BT7 664 aaKnown RBP12.55□□□□□ -0.4
TPM3-216ENST00000473036 PRAP1Q96NZ9 151 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 ALG9Q9H6U8 611 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 PLCL2Q9UPR0 1127 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 PCDHB3Q9Y5E6 796 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 PCSK5Q92824 1860 aa12.55□□□□□ -0.4
TPM3-216ENST00000473036 IQANK1A0A1B0GTG1 560 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 ZNF839A8K0R7 811 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 E7EQ34 232 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 P2RX6O15547 441 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 LCMT2O60294 686 aaKnown RBP12.54□□□□□ -0.4
TPM3-216ENST00000473036 OR2B3O76000 313 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 STATHP02808 62 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 LTA4HP09960 611 aaKnown RBP12.54□□□□□ -0.4
TPM3-216ENST00000473036 HIST1H2AGP0C0S8 130 aaPredicted RBP12.54□□□□□ -0.4
TPM3-216ENST00000473036 MYZAPP0CAP1 466 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 CDH1P12830 882 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 TFEBP19484 476 aa12.54□□□□□ -0.4
TPM3-216ENST00000473036 HIST1H2ADP20671 130 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms