RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 GYS2P54840 703 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 INHBCP55103 352 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 YBX1P67809 324 aaKnown RBP10.12□□□□□ -0.79
UBE2F-220ENST00000472479 BST1Q10588 318 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 DDX39BQ13838 428 aaKnown RBP10.12□□□□□ -0.79
UBE2F-220ENST00000472479 CPSF6Q16630 551 aaKnown RBP eCLIP10.12□□□□□ -0.79
UBE2F-220ENST00000472479 ARL13AQ5H913 290 aaPredicted RBP10.12□□□□□ -0.79
UBE2F-220ENST00000472479 ZC3H12BQ5HYM0 836 aaKnown RBP10.12□□□□□ -0.79
UBE2F-220ENST00000472479 SH2D4BQ5SQS7 431 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 LIPJQ5W064 366 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 ATG9BQ674R7 924 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 MED27Q6P2C8 311 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 FRMD7Q6ZUT3 714 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 FAM129CQ86XR2 697 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 CRLF3Q8IUI8 442 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 KLHDC8AQ8IYD2 350 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 CDYL2Q8N8U2 506 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 OR4F6Q8NGB9 312 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 OR52B6Q8NGF0 335 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 CKAP2Q8WWK9 683 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 RERGQ96A58 199 aaPredicted RBP10.12□□□□□ -0.79
UBE2F-220ENST00000472479 REPS1Q96D71 796 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 PTCD3Q96EY7 689 aaKnown RBP10.12□□□□□ -0.79
UBE2F-220ENST00000472479 TCTN2Q96GX1 697 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 CCDC74BQ96LY2 380 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 PLCD4Q9BRC7 762 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 C1QTNF3Q9BXJ4 246 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 ELOVL6Q9H5J4 265 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 PELI2Q9HAT8 420 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 FANCEQ9HB96 536 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 THAP1Q9NVV9 213 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 TMEM9Q9P0T7 183 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 RNF11Q9Y3C5 154 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 PCDHGA11Q9Y5H2 935 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 EP300Q09472 2414 aaPredicted RBP10.12□□□□□ -0.79
UBE2F-220ENST00000472479 OTOGLQ3ZCN5 2332 aa10.12□□□□□ -0.79
UBE2F-220ENST00000472479 IGHV5-10-1A0A0J9YXX1 117 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 FEZF1A0PJY2 475 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 TCP11X1B4DZS4 312 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 PPP6CO00743 305 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 OR7A17O14581 309 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 PRICKLE3O43900 615 aaPredicted RBP10.11□□□□□ -0.79
UBE2F-220ENST00000472479 SNUPNO95149 360 aaKnown RBP10.11□□□□□ -0.79
UBE2F-220ENST00000472479 ESRRBO95718 433 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 MT-CO3P00414 261 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 KRT6AP02538 564 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 KRT6BP04259 564 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 CHRNGP07510 517 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 FTH1P19P0C7X4 201 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 KITP10721 976 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 CSF2RBP32927 897 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 KRT6CP48668 564 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 CSNK1G2P78368 415 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 HSD11B2P80365 405 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 FOXM1Q08050 763 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 CYP4F3Q08477 520 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 SQSTM1Q13501 440 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 FOXR1Q6PIV2 292 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 SLCO4C1Q6ZQN7 724 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 FAM47EQ6ZV65 393 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 MTERF4Q7Z6M4 381 aaKnown RBP10.11□□□□□ -0.79
UBE2F-220ENST00000472479 GLRX5Q86SX6 157 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 CUZD1Q86UP6 607 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 PLD3Q8IV08 490 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 C19orf47Q8N9M1 422 aaKnown RBP10.11□□□□□ -0.79
UBE2F-220ENST00000472479 RCBTB1Q8NDN9 531 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 BAHD1Q8TBE0 780 aaPredicted RBP10.11□□□□□ -0.79
UBE2F-220ENST00000472479 TRAPPC9Q96Q05 1148 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 ZNF382Q96SR6 550 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 NTMT1Q9BV86 223 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 NLNQ9BYT8 704 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 SLC7A5P2Q9GIP4 190 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 ZBTB26Q9HCK0 441 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 SLC6A20Q9NP91 592 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 PFDN4Q9NQP4 134 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 ANKMY1Q9P2S6 941 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 SNX6Q9UNH7 406 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 SH2B3Q9UQQ2 575 aa10.11□□□□□ -0.79
UBE2F-220ENST00000472479 IGHV5-51A0A0C4DH38 117 aa10.1□□□□□ -0.79
UBE2F-220ENST00000472479 DCDC2BA2VCK2 349 aa10.1□□□□□ -0.79
UBE2F-220ENST00000472479 D6RAR5 112 aa10.1□□□□□ -0.79
UBE2F-220ENST00000472479 AZIN1O14977 448 aa10.1□□□□□ -0.79
UBE2F-220ENST00000472479 CASC3O15234 703 aaKnown RBP10.1□□□□□ -0.79
UBE2F-220ENST00000472479 ITM2AO43736 263 aa10.1□□□□□ -0.79
UBE2F-220ENST00000472479 UGDHO60701 494 aa10.1□□□□□ -0.79
UBE2F-220ENST00000472479 ULK1O75385 1050 aa10.1□□□□□ -0.79
UBE2F-220ENST00000472479 C9P02748 559 aa10.1□□□□□ -0.79
UBE2F-220ENST00000472479 ENO1P06733 434 aaKnown RBP10.1□□□□□ -0.79
UBE2F-220ENST00000472479 CAPN1P07384 714 aa10.1□□□□□ -0.79
UBE2F-220ENST00000472479 SERPINB3P29508 390 aa10.1□□□□□ -0.79
UBE2F-220ENST00000472479 LSSP48449 732 aa10.1□□□□□ -0.79
UBE2F-220ENST00000472479 ERVPABLB-1P60509 514 aa10.1□□□□□ -0.79
UBE2F-220ENST00000472479 RPS15AP62244 130 aaKnown RBP10.1□□□□□ -0.79
UBE2F-220ENST00000472479 GNGT1P63211 74 aa10.1□□□□□ -0.79
UBE2F-220ENST00000472479 SH3BP2P78314 561 aa10.1□□□□□ -0.79
UBE2F-220ENST00000472479 CYP4F2P78329 520 aa10.1□□□□□ -0.79
UBE2F-220ENST00000472479 CFHR1Q03591 330 aa10.1□□□□□ -0.79
UBE2F-220ENST00000472479 ZRSR2Q15696 482 aaKnown RBP10.1□□□□□ -0.79
UBE2F-220ENST00000472479 IMPG1Q17R60 797 aa10.1□□□□□ -0.79
UBE2F-220ENST00000472479 GRHL2Q6ISB3 625 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms