RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 DEFB109BQ30KR1 87 aa8.8□□□□□ -1
SMC4-213ENST00000472282 COLEC12Q5KU26 742 aa8.8□□□□□ -1
SMC4-213ENST00000472282 TBCELQ5QJ74 424 aa8.8□□□□□ -1
SMC4-213ENST00000472282 C6orf15Q6UXA7 325 aaPredicted RBP8.8□□□□□ -1
SMC4-213ENST00000472282 RAPH1Q70E73 1250 aa8.8□□□□□ -1
SMC4-213ENST00000472282 UBE2R2Q712K3 238 aaPredicted RBP8.8□□□□□ -1
SMC4-213ENST00000472282 TAOK1Q7L7X3 1001 aa8.8□□□□□ -1
SMC4-213ENST00000472282 TAX1BP1Q86VP1 789 aa8.8□□□□□ -1
SMC4-213ENST00000472282 RASGRP3Q8IV61 690 aa8.8□□□□□ -1
SMC4-213ENST00000472282 DEPDC4Q8N2C3 294 aa8.8□□□□□ -1
SMC4-213ENST00000472282 NKAPQ8N5F7 415 aaKnown RBP8.8□□□□□ -1
SMC4-213ENST00000472282 ESX1Q8N693 406 aa8.8□□□□□ -1
SMC4-213ENST00000472282 MAGEC3Q8TD91 643 aa8.8□□□□□ -1
SMC4-213ENST00000472282 DENND1AQ8TEH3 1009 aa8.8□□□□□ -1
SMC4-213ENST00000472282 ASB11Q8WXH4 323 aa8.8□□□□□ -1
SMC4-213ENST00000472282 DLG3Q92796 817 aa8.8□□□□□ -1
SMC4-213ENST00000472282 CAVIN3Q969G5 261 aa8.8□□□□□ -1
SMC4-213ENST00000472282 KIAA1143Q96AT1 154 aaPredicted RBP8.8□□□□□ -1
SMC4-213ENST00000472282 SLC41A2Q96JW4 573 aa8.8□□□□□ -1
SMC4-213ENST00000472282 DHRS4Q9BTZ2 278 aa8.8□□□□□ -1
SMC4-213ENST00000472282 MENTQ9BUN1 341 aa8.8□□□□□ -1
SMC4-213ENST00000472282 SLC25A18Q9H1K4 315 aa8.8□□□□□ -1
SMC4-213ENST00000472282 SYTL2Q9HCH5 934 aa8.8□□□□□ -1
SMC4-213ENST00000472282 BRD7Q9NPI1 651 aa8.8□□□□□ -1
SMC4-213ENST00000472282 SNX15Q9NRS6 342 aa8.8□□□□□ -1
SMC4-213ENST00000472282 HRASLS2Q9NWW9 162 aa8.8□□□□□ -1
SMC4-213ENST00000472282 LNPEPQ9UIQ6 1025 aa8.8□□□□□ -1
SMC4-213ENST00000472282 ZNF180Q9UJW8 692 aa8.8□□□□□ -1
SMC4-213ENST00000472282 CROTQ9UKG9 612 aa8.8□□□□□ -1
SMC4-213ENST00000472282 ADAMTS6Q9UKP5 1117 aa8.8□□□□□ -1
SMC4-213ENST00000472282 IKZF3Q9UKT9 509 aa8.8□□□□□ -1
SMC4-213ENST00000472282 KALRNO60229 2985 aa8.8□□□□□ -1
SMC4-213ENST00000472282 HELZ2Q9BYK8 2649 aaKnown RBP8.8□□□□□ -1
SMC4-213ENST00000472282 NUP210LQ5VU65 1888 aa8.79□□□□□ -1
SMC4-213ENST00000472282 PIPSLA2A3N6 862 aa8.79□□□□□ -1
SMC4-213ENST00000472282 SMIM23A6NLE4 172 aa8.79□□□□□ -1
SMC4-213ENST00000472282 CYSRT1A8MQ03 144 aa8.79□□□□□ -1
SMC4-213ENST00000472282 TRIM49D1C9J1S8 452 aa8.79□□□□□ -1
SMC4-213ENST00000472282 GFYI3L273 518 aa8.79□□□□□ -1
SMC4-213ENST00000472282 K7EM74 188 aa8.79□□□□□ -1
SMC4-213ENST00000472282 MYO1CO00159 1063 aa8.79□□□□□ -1
SMC4-213ENST00000472282 CDC7O00311 574 aa8.79□□□□□ -1
SMC4-213ENST00000472282 RASGRF2O14827 1237 aa8.79□□□□□ -1
SMC4-213ENST00000472282 ZBTB14O43829 449 aa8.79□□□□□ -1
SMC4-213ENST00000472282 ALDOAP04075 364 aaKnown RBP8.79□□□□□ -1
SMC4-213ENST00000472282 NTRK1P04629 796 aa8.79□□□□□ -1
SMC4-213ENST00000472282 TUBBP07437 444 aa8.79□□□□□ -1
SMC4-213ENST00000472282 CHRM5P08912 532 aaPredicted RBP8.79□□□□□ -1
SMC4-213ENST00000472282 SLC35E2BP0CK96 405 aa8.79□□□□□ -1
SMC4-213ENST00000472282 CCDC166P0CW27 439 aa8.79□□□□□ -1
SMC4-213ENST00000472282 TCN2P20062 427 aa8.79□□□□□ -1
SMC4-213ENST00000472282 NR1D1P20393 614 aa8.79□□□□□ -1
SMC4-213ENST00000472282 CYP2A7P20853 494 aa8.79□□□□□ -1
SMC4-213ENST00000472282 PEBP1P30086 187 aaKnown RBP8.79□□□□□ -1
SMC4-213ENST00000472282 CCR10P46092 362 aa8.79□□□□□ -1
SMC4-213ENST00000472282 KPNA2P52292 529 aaKnown RBP8.79□□□□□ -1
SMC4-213ENST00000472282 IRF9Q00978 393 aa8.79□□□□□ -1
SMC4-213ENST00000472282 KCNAB2Q13303 367 aa8.79□□□□□ -1
SMC4-213ENST00000472282 TUBB3Q13509 450 aa8.79□□□□□ -1
SMC4-213ENST00000472282 ERV3-1Q14264 604 aa8.79□□□□□ -1
SMC4-213ENST00000472282 CSHL1Q14406 222 aa8.79□□□□□ -1
SMC4-213ENST00000472282 IL11RAQ14626 422 aa8.79□□□□□ -1
SMC4-213ENST00000472282 GPR19Q15760 415 aa8.79□□□□□ -1
SMC4-213ENST00000472282 PRAMEF17Q5VTA0 474 aa8.79□□□□□ -1
SMC4-213ENST00000472282 PWWP2BQ6NUJ5 590 aa8.79□□□□□ -1
SMC4-213ENST00000472282 ARMC6Q6NXE6 501 aa8.79□□□□□ -1
SMC4-213ENST00000472282 FAM199XQ6PEV8 388 aaPredicted RBP8.79□□□□□ -1
SMC4-213ENST00000472282 MBOAT1Q6ZNC8 495 aa8.79□□□□□ -1
SMC4-213ENST00000472282 ADGRF3Q8IZF5 1079 aa8.79□□□□□ -1
SMC4-213ENST00000472282 SPATA6LQ8N4H0 392 aa8.79□□□□□ -1
SMC4-213ENST00000472282 C2orf73Q8N5S3 287 aaPredicted RBP8.79□□□□□ -1
SMC4-213ENST00000472282 LINC01555Q8NAE3 123 aa8.79□□□□□ -1
SMC4-213ENST00000472282 FBXO15Q8NCQ5 510 aaPredicted RBP8.79□□□□□ -1
SMC4-213ENST00000472282 OR9A1PQ8NGU1 263 aa8.79□□□□□ -1
SMC4-213ENST00000472282 OR2L8Q8NGY9 312 aa8.79□□□□□ -1
SMC4-213ENST00000472282 EPS8L3Q8TE67 593 aaKnown RBP8.79□□□□□ -1
SMC4-213ENST00000472282 CT55Q8WUE5 264 aa8.79□□□□□ -1
SMC4-213ENST00000472282 ZDHHC12Q96GR4 267 aa8.79□□□□□ -1
SMC4-213ENST00000472282 PDLIM5Q96HC4 596 aaKnown RBP8.79□□□□□ -1
SMC4-213ENST00000472282 PKP4Q99569 1192 aa8.79□□□□□ -1
SMC4-213ENST00000472282 RAB11FIP5Q9BXF6 653 aa8.79□□□□□ -1
SMC4-213ENST00000472282 DERL2Q9GZP9 239 aa8.79□□□□□ -1
SMC4-213ENST00000472282 ADNPQ9H2P0 1102 aa8.79□□□□□ -1
SMC4-213ENST00000472282 ZNF71Q9NQZ8 489 aaPredicted RBP8.79□□□□□ -1
SMC4-213ENST00000472282 SPHK1Q9NYA1 384 aa8.79□□□□□ -1
SMC4-213ENST00000472282 ACTR10Q9NZ32 417 aa8.79□□□□□ -1
SMC4-213ENST00000472282 SPATA7Q9P0W8 599 aa8.79□□□□□ -1
SMC4-213ENST00000472282 PSMC3IPQ9P2W1 217 aaPredicted RBP8.79□□□□□ -1
SMC4-213ENST00000472282 CTNNAL1Q9UBT7 734 aa8.79□□□□□ -1
SMC4-213ENST00000472282 FETUBQ9UGM5 382 aa8.79□□□□□ -1
SMC4-213ENST00000472282 POMT2Q9UKY4 750 aa8.79□□□□□ -1
SMC4-213ENST00000472282 PDE10AQ9Y233 779 aa8.79□□□□□ -1
SMC4-213ENST00000472282 HEMK1Q9Y5R4 338 aaPredicted RBP8.79□□□□□ -1
SMC4-213ENST00000472282 A0A096LPK6 155 aa8.78□□□□□ -1
SMC4-213ENST00000472282 PABPN1LA6NDY0 278 aaKnown RBP8.78□□□□□ -1
SMC4-213ENST00000472282 TLCD2A6NGC4 264 aa8.78□□□□□ -1
SMC4-213ENST00000472282 C2orf74A8MZ97 194 aa8.78□□□□□ -1
SMC4-213ENST00000472282 ISM1B1AKI9 464 aa8.78□□□□□ -1
SMC4-213ENST00000472282 MATN2O00339 956 aa8.78□□□□□ -1
SMC4-213ENST00000472282 SLC16A5O15375 505 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms