RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 KCNMB2Q9Y691 235 aa14.41□□□□□ -0.1
CALD1-215ENST00000472096 TLN1Q9Y490 2541 aaKnown RBP14.41□□□□□ -0.1
CALD1-215ENST00000472096 TNRC6AQ8NDV7 1962 aaKnown RBP14.4□□□□□ -0.1
CALD1-215ENST00000472096 BOD1L1Q8NFC6 3051 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 LOC105369274A0A096LPK9 316 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 LOC102723532A0A0G2JNH3 316 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 PABPN1LA6NDY0 278 aaKnown RBP14.4□□□□□ -0.1
CALD1-215ENST00000472096 DSCR3O14972 297 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 ENO2P09104 434 aaPredicted RBP14.4□□□□□ -0.1
CALD1-215ENST00000472096 HIST1H2AGP0C0S8 130 aaPredicted RBP14.4□□□□□ -0.1
CALD1-215ENST00000472096 EZRP15311 586 aaKnown RBP14.4□□□□□ -0.1
CALD1-215ENST00000472096 HIST1H2ADP20671 130 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 ITGAXP20702 1163 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 STX2P32856 288 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 GP5P40197 560 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 AP1S2P56377 157 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 DCDP81605 110 aaKnown RBP14.4□□□□□ -0.1
CALD1-215ENST00000472096 SLC9A5Q14940 896 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 KBTBD12Q3ZCT8 623 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 LINC01559Q495D7 138 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 WASHC2DQ5SRD0 308 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 TTLL10Q6ZVT0 673 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 OR4N4Q8N0Y3 316 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 NKAPQ8N5F7 415 aaKnown RBP14.4□□□□□ -0.1
CALD1-215ENST00000472096 KIF18AQ8NI77 898 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 ADAMTS17Q8TE56 1095 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 APOBEC4Q8WW27 367 aaKnown RBP14.4□□□□□ -0.1
CALD1-215ENST00000472096 HIST1H2AHQ96KK5 128 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 GPR22Q99680 433 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 HIST1H2AJQ99878 128 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 H2AFJQ9BTM1 129 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 ATG10Q9H0Y0 220 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 POPDC3Q9HBV1 291 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 GEMIN8Q9NWZ8 242 aaKnown RBP14.4□□□□□ -0.1
CALD1-215ENST00000472096 ARL15Q9NXU5 204 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 UTP6Q9NYH9 597 aaKnown RBP14.4□□□□□ -0.1
CALD1-215ENST00000472096 TXNDC16Q9P2K2 825 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 DMGDHQ9UI17 866 aaKnown RBP14.4□□□□□ -0.1
CALD1-215ENST00000472096 SH2B3Q9UQQ2 575 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 PADI2Q9Y2J8 665 aa14.4□□□□□ -0.1
CALD1-215ENST00000472096 NPEPPSL1A6NEC2 478 aa14.39□□□□□ -0.11
CALD1-215ENST00000472096 H0YGG7 62 aa14.39□□□□□ -0.11
CALD1-215ENST00000472096 HAT1O14929 419 aa14.39□□□□□ -0.11
CALD1-215ENST00000472096 WISP3O95389 354 aaPredicted RBP14.39□□□□□ -0.11
CALD1-215ENST00000472096 CCND1P24385 295 aa14.39□□□□□ -0.11
CALD1-215ENST00000472096 PMS2P54278 862 aa14.39□□□□□ -0.11
CALD1-215ENST00000472096 ARF3P61204 181 aaPredicted RBP14.39□□□□□ -0.11
CALD1-215ENST00000472096 POU4F1Q01851 419 aa14.39□□□□□ -0.11
CALD1-215ENST00000472096 KCNAB2Q13303 367 aa14.39□□□□□ -0.11
CALD1-215ENST00000472096 NAE1Q13564 534 aa14.39□□□□□ -0.11
CALD1-215ENST00000472096 PPP1R3AQ16821 1122 aa14.39□□□□□ -0.11
CALD1-215ENST00000472096 ZXDCQ2QGD7 858 aaPredicted RBP14.39□□□□□ -0.11
CALD1-215ENST00000472096 NKAIN1Q4KMZ8 207 aa14.39□□□□□ -0.11
CALD1-215ENST00000472096 FBXO42Q6P3S6 717 aa14.39□□□□□ -0.11
CALD1-215ENST00000472096 ADCK2Q7Z695 626 aa14.39□□□□□ -0.11
CALD1-215ENST00000472096 CTAGE3PQ8IX95 158 aa14.39□□□□□ -0.11
CALD1-215ENST00000472096 FBF1Q8TES7 1133 aa14.39□□□□□ -0.11
CALD1-215ENST00000472096 ANKRD49Q8WVL7 239 aa14.39□□□□□ -0.11
CALD1-215ENST00000472096 ANKRD7Q92527 254 aa14.39□□□□□ -0.11
CALD1-215ENST00000472096 C10orf90Q96M02 699 aa14.39□□□□□ -0.11
CALD1-215ENST00000472096 SGPP1Q9BX95 441 aa14.39□□□□□ -0.11
CALD1-215ENST00000472096 TRIM54Q9BYV2 358 aa14.39□□□□□ -0.11
CALD1-215ENST00000472096 FAM129AQ9BZQ8 928 aa14.39□□□□□ -0.11
CALD1-215ENST00000472096 PCBD2Q9H0N5 130 aa14.39□□□□□ -0.11
CALD1-215ENST00000472096 GPAMQ9HCL2 828 aa14.39□□□□□ -0.11
CALD1-215ENST00000472096 IFT80Q9P2H3 777 aaPredicted RBP14.39□□□□□ -0.11
CALD1-215ENST00000472096 NDOR1Q9UHB4 597 aa14.39□□□□□ -0.11
CALD1-215ENST00000472096 GPN3Q9UHW5 284 aaPredicted RBP14.39□□□□□ -0.11
CALD1-215ENST00000472096 TUBD1Q9UJT1 453 aa14.39□□□□□ -0.11
CALD1-215ENST00000472096 NOVA2Q9UNW9 492 aaKnown RBP14.39□□□□□ -0.11
CALD1-215ENST00000472096 MTO1Q9Y2Z2 717 aaKnown RBP14.39□□□□□ -0.11
CALD1-215ENST00000472096 HYKKA2RU49 373 aa14.38□□□□□ -0.11
CALD1-215ENST00000472096 H7BY64 318 aa14.38□□□□□ -0.11
CALD1-215ENST00000472096 CDC7O00311 574 aa14.38□□□□□ -0.11
CALD1-215ENST00000472096 CNOT3O75175 753 aaKnown RBP14.38□□□□□ -0.11
CALD1-215ENST00000472096 KLF7O75840 302 aaPredicted RBP14.38□□□□□ -0.11
CALD1-215ENST00000472096 MED26O95402 600 aa14.38□□□□□ -0.11
CALD1-215ENST00000472096 EIF2S1P05198 315 aaKnown RBP14.38□□□□□ -0.11
CALD1-215ENST00000472096 FBXO45P0C2W1 286 aa14.38□□□□□ -0.11
CALD1-215ENST00000472096 SFTPCP11686 197 aa14.38□□□□□ -0.11
CALD1-215ENST00000472096 ALAS2P22557 587 aa14.38□□□□□ -0.11
CALD1-215ENST00000472096 SLC12A2P55011 1212 aa14.38□□□□□ -0.11
CALD1-215ENST00000472096 RELAQ04206 551 aa14.38□□□□□ -0.11
CALD1-215ENST00000472096 C19orf57Q0VDD7 668 aa14.38□□□□□ -0.11
CALD1-215ENST00000472096 NAB1Q13506 487 aa14.38□□□□□ -0.11
CALD1-215ENST00000472096 EFTUD2Q15029 972 aaKnown RBP eCLIP14.38□□□□□ -0.11
CALD1-215ENST00000472096 PRTGQ2VWP7 1150 aa14.38□□□□□ -0.11
CALD1-215ENST00000472096 MLIPQ5VWP3 458 aa14.38□□□□□ -0.11
CALD1-215ENST00000472096 MRPL14Q6P1L8 145 aaKnown RBP14.38□□□□□ -0.11
CALD1-215ENST00000472096 LCTLQ6UWM7 567 aa14.38□□□□□ -0.11
CALD1-215ENST00000472096 COX15Q7KZN9 410 aa14.38□□□□□ -0.11
CALD1-215ENST00000472096 DTWD1Q8N5C7 304 aa14.38□□□□□ -0.11
CALD1-215ENST00000472096 CSNK1A1LQ8N752 337 aa14.38□□□□□ -0.11
CALD1-215ENST00000472096 PPM1NQ8N819 430 aa14.38□□□□□ -0.11
CALD1-215ENST00000472096 OR56A3Q8NH54 315 aa14.38□□□□□ -0.11
CALD1-215ENST00000472096 THAP4Q8WY91 577 aa14.38□□□□□ -0.11
CALD1-215ENST00000472096 FKBP10Q96AY3 582 aa14.38□□□□□ -0.11
CALD1-215ENST00000472096 FBXL8Q96CD0 374 aa14.38□□□□□ -0.11
CALD1-215ENST00000472096 TSPAN17Q96FV3 270 aa14.38□□□□□ -0.11
CALD1-215ENST00000472096 PRAP1Q96NZ9 151 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms