RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 PFKFB1P16118 471 aa3.59□□□□□ -1.83
CD46-213ENST00000471987 TRAP1Q12931 704 aaKnown RBP3.59□□□□□ -1.83
CD46-213ENST00000471987 SNAPC1Q16533 368 aa3.59□□□□□ -1.83
CD46-213ENST00000471987 NTRK2Q16620 822 aa3.59□□□□□ -1.83
CD46-213ENST00000471987 SPECC1Q5M775 1068 aa3.59□□□□□ -1.83
CD46-213ENST00000471987 OR4A47Q6IF82 309 aa3.59□□□□□ -1.83
CD46-213ENST00000471987 MINDY1Q8N5J2 469 aa3.59□□□□□ -1.83
CD46-213ENST00000471987 SECISBP2LQ93073 1101 aaKnown RBP3.59□□□□□ -1.83
CD46-213ENST00000471987 NXNL1Q96CM4 212 aa3.59□□□□□ -1.83
CD46-213ENST00000471987 FAM71F1Q96KD3 344 aaPredicted RBP3.59□□□□□ -1.83
CD46-213ENST00000471987 ANP32EQ9BTT0 268 aa3.59□□□□□ -1.83
CD46-213ENST00000471987 MRPL1Q9BYD6 325 aaKnown RBP3.59□□□□□ -1.83
CD46-213ENST00000471987 Q9H8V8 135 aa3.59□□□□□ -1.83
CD46-213ENST00000471987 MYNNQ9NPC7 610 aa3.59□□□□□ -1.83
CD46-213ENST00000471987 ABCB10Q9NRK6 738 aa3.59□□□□□ -1.83
CD46-213ENST00000471987 GIMAP4Q9NUV9 329 aa3.59□□□□□ -1.83
CD46-213ENST00000471987 PRO0461Q9UI25 63 aa3.59□□□□□ -1.83
CD46-213ENST00000471987 PRDM4Q9UKN5 801 aa3.59□□□□□ -1.83
CD46-213ENST00000471987 WDR83OSQ9Y284 106 aa3.59□□□□□ -1.83
CD46-213ENST00000471987 IGSF1Q8N6C5 1336 aa3.59□□□□□ -1.83
CD46-213ENST00000471987 TRBV4-1A0A0J9YWV2 114 aa3.58□□□□□ -1.84
CD46-213ENST00000471987 A0A1W2PPQ1 181 aa3.58□□□□□ -1.84
CD46-213ENST00000471987 SURF4O15260 269 aa3.58□□□□□ -1.84
CD46-213ENST00000471987 TSPAN9O75954 239 aa3.58□□□□□ -1.84
CD46-213ENST00000471987 RAB40ALP0C0E4 278 aa3.58□□□□□ -1.84
CD46-213ENST00000471987 VEZF1Q14119 521 aa3.58□□□□□ -1.84
CD46-213ENST00000471987 GPR33Q49SQ1 333 aa3.58□□□□□ -1.84
CD46-213ENST00000471987 FAM198BQ6UWH4 519 aa3.58□□□□□ -1.84
CD46-213ENST00000471987 BAIAP2L2Q6UXY1 529 aa3.58□□□□□ -1.84
CD46-213ENST00000471987 TIPARPQ7Z3E1 657 aaKnown RBP3.58□□□□□ -1.84
CD46-213ENST00000471987 RNF130Q86XS8 419 aa3.58□□□□□ -1.84
CD46-213ENST00000471987 FGFRL1Q8N441 504 aa3.58□□□□□ -1.84
CD46-213ENST00000471987 Q8N7P7 452 aa3.58□□□□□ -1.84
CD46-213ENST00000471987 APPL2Q8NEU8 664 aa3.58□□□□□ -1.84
CD46-213ENST00000471987 OR4D10Q8NGI6 311 aa3.58□□□□□ -1.84
CD46-213ENST00000471987 ZNF69Q9UC07 566 aa3.58□□□□□ -1.84
CD46-213ENST00000471987 ELF5Q9UKW6 265 aaPredicted RBP3.58□□□□□ -1.84
CD46-213ENST00000471987 ITIH6Q6UXX5 1313 aa3.58□□□□□ -1.84
CD46-213ENST00000471987 TRIM49BA6NDI0 452 aa3.57□□□□□ -1.84
CD46-213ENST00000471987 ZNF840PA6NDX5 716 aa3.57□□□□□ -1.84
CD46-213ENST00000471987 TRAFD1O14545 582 aaPredicted RBP3.57□□□□□ -1.84
CD46-213ENST00000471987 NXPH4O95158 308 aa3.57□□□□□ -1.84
CD46-213ENST00000471987 LINGO3P0C6S8 592 aa3.57□□□□□ -1.84
CD46-213ENST00000471987 MYOGP15173 224 aa3.57□□□□□ -1.84
CD46-213ENST00000471987 BAATQ14032 418 aaPredicted RBP3.57□□□□□ -1.84
CD46-213ENST00000471987 C3AR1Q16581 482 aa3.57□□□□□ -1.84
CD46-213ENST00000471987 FAM166AQ6J272 317 aa3.57□□□□□ -1.84
CD46-213ENST00000471987 OR4N5Q8IXE1 308 aa3.57□□□□□ -1.84
CD46-213ENST00000471987 ZBED8Q8IZ13 594 aa3.57□□□□□ -1.84
CD46-213ENST00000471987 FAM9BQ8IZU0 186 aa3.57□□□□□ -1.84
CD46-213ENST00000471987 NOA1Q8NC60 698 aaKnown RBP3.57□□□□□ -1.84
CD46-213ENST00000471987 CHURC1Q8WUH1 139 aa3.57□□□□□ -1.84
CD46-213ENST00000471987 TREX2Q9BQ50 279 aaPredicted RBP3.57□□□□□ -1.84
CD46-213ENST00000471987 CHCHD6Q9BRQ6 235 aa3.57□□□□□ -1.84
CD46-213ENST00000471987 PRRG4Q9BZD6 226 aa3.57□□□□□ -1.84
CD46-213ENST00000471987 ADNPQ9H2P0 1102 aa3.57□□□□□ -1.84
CD46-213ENST00000471987 CRNNQ9UBG3 495 aaPredicted RBP3.57□□□□□ -1.84
CD46-213ENST00000471987 CLIP2Q9UDT6 1046 aa3.57□□□□□ -1.84
CD46-213ENST00000471987 A0A087WWV3 80 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 C2CD4DB7Z1M9 353 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 OGTO15294 1046 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 CSH1P0DML2 217 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 CSH2P0DML3 217 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 AOC1P19801 751 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 AADACP22760 399 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 CALRP27797 417 aaKnown RBP3.56□□□□□ -1.84
CD46-213ENST00000471987 HOXD13P35453 343 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 NAP1L1P55209 391 aaKnown RBP3.56□□□□□ -1.84
CD46-213ENST00000471987 DCDC1P59894 354 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 HNRNPKP61978 463 aaKnown RBP eCLIP3.56□□□□□ -1.849e-8■■■□□ 15.5
CD46-213ENST00000471987 EPS8Q12929 822 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 CHAF1BQ13112 559 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 SRSF9Q13242 221 aaKnown RBP eCLIP3.56□□□□□ -1.84
CD46-213ENST00000471987 TRA2AQ13595 282 aaKnown RBP eCLIP3.56□□□□□ -1.84
CD46-213ENST00000471987 CUL3Q13618 768 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 WDR78Q5VTH9 848 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 TSPAN14Q8NG11 270 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 CFAP61Q8NHU2 1237 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 PRPF31Q8WWY3 499 aaKnown RBP3.56□□□□□ -1.84
CD46-213ENST00000471987 METTL21AQ8WXB1 218 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 PIK3R3Q92569 461 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 RFT1Q96AA3 541 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 MOB3AQ96BX8 217 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 CNOT6LQ96LI5 555 aaKnown RBP3.56□□□□□ -1.84
CD46-213ENST00000471987 ZHX3Q9H4I2 956 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 JPT2Q9H910 190 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 PRMT7Q9NVM4 692 aaPredicted RBP3.56□□□□□ -1.84
CD46-213ENST00000471987 HAUS2Q9NVX0 235 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 GDE1Q9NZC3 331 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 IL17BQ9UHF5 180 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 DDX25Q9UHL0 483 aaKnown RBP3.56□□□□□ -1.84
CD46-213ENST00000471987 BAIAP2L1Q9UHR4 511 aa3.56□□□□□ -1.84
CD46-213ENST00000471987 SLC1A7O00341 560 aa3.55□□□□□ -1.84
CD46-213ENST00000471987 PHF1O43189 567 aaPredicted RBP3.55□□□□□ -1.84
CD46-213ENST00000471987 ENTPD3O75355 529 aa3.55□□□□□ -1.84
CD46-213ENST00000471987 SLCO2B1O94956 709 aa3.55□□□□□ -1.84
CD46-213ENST00000471987 PCP11498 1178 aaKnown RBP3.55□□□□□ -1.84
CD46-213ENST00000471987 CAPN3P20807 821 aa3.55□□□□□ -1.84
CD46-213ENST00000471987 UBXN2AP68543 259 aa3.55□□□□□ -1.84
CD46-213ENST00000471987 FKBP3Q00688 224 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms