RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 CD200R1Q8TD46 325 aa21.46■■□□□ 1.03
C9orf3-213ENST00000471978 PPP4R1Q8TF05 950 aa21.46■■□□□ 1.03
C9orf3-213ENST00000471978 GRK7Q8WTQ7 553 aa21.46■■□□□ 1.03
C9orf3-213ENST00000471978 COG1Q8WTW3 980 aa21.46■■□□□ 1.03
C9orf3-213ENST00000471978 C8orf44Q96CB5 159 aa21.46■■□□□ 1.03
C9orf3-213ENST00000471978 MVB12AQ96EY5 273 aa21.46■■□□□ 1.03
C9orf3-213ENST00000471978 ZNF160Q9HCG1 818 aa21.46■■□□□ 1.03
C9orf3-213ENST00000471978 TRPC4Q9UBN4 977 aa21.46■■□□□ 1.03
C9orf3-213ENST00000471978 PLEKHB1Q9UF11 243 aaPredicted RBP21.46■■□□□ 1.03
C9orf3-213ENST00000471978 FBXO5Q9UKT4 447 aa21.46■■□□□ 1.03
C9orf3-213ENST00000471978 HIVEP3Q5T1R4 2406 aa21.45■■□□□ 1.02
C9orf3-213ENST00000471978 MAP2K7O14733 419 aa21.45■■□□□ 1.02
C9orf3-213ENST00000471978 PRPF4O43172 522 aaKnown RBP eCLIP21.45■■□□□ 1.022e-7■■■■□ 25.5
C9orf3-213ENST00000471978 HAUS5O94927 633 aa21.45■■□□□ 1.02
C9orf3-213ENST00000471978 HPP00738 406 aa21.45■■□□□ 1.02
C9orf3-213ENST00000471978 RNF224P0DH78 156 aa21.45■■□□□ 1.02
C9orf3-213ENST00000471978 ABATP80404 500 aa21.45■■□□□ 1.02
C9orf3-213ENST00000471978 MPP1Q00013 466 aa21.45■■□□□ 1.02
C9orf3-213ENST00000471978 DSG2Q14126 1118 aa21.45■■□□□ 1.02
C9orf3-213ENST00000471978 C4orf17Q53FE4 359 aa21.45■■□□□ 1.02
C9orf3-213ENST00000471978 HSP90AA5PQ58FG0 334 aa21.45■■□□□ 1.02
C9orf3-213ENST00000471978 THEMIS2Q5TEJ8 643 aa21.45■■□□□ 1.02
C9orf3-213ENST00000471978 ATG9BQ674R7 924 aa21.45■■□□□ 1.02
C9orf3-213ENST00000471978 LAPTM4BQ86VI4 370 aa21.45■■□□□ 1.02
C9orf3-213ENST00000471978 PPIL6Q8IXY8 311 aa21.45■■□□□ 1.02
C9orf3-213ENST00000471978 CPNE9Q8IYJ1 553 aa21.45■■□□□ 1.02
C9orf3-213ENST00000471978 EPS8L2Q9H6S3 715 aa21.45■■□□□ 1.02
C9orf3-213ENST00000471978 PCYOX1Q9UHG3 505 aa21.45■■□□□ 1.02
C9orf3-213ENST00000471978 NOVA2Q9UNW9 492 aaKnown RBP21.45■■□□□ 1.02
C9orf3-213ENST00000471978 NTNG1Q9Y2I2 539 aa21.45■■□□□ 1.02
C9orf3-213ENST00000471978 UNC79Q9P2D8 2635 aa21.45■■□□□ 1.02
C9orf3-213ENST00000471978 ANKUB1A6NFN9 424 aa21.44■■□□□ 1.02
C9orf3-213ENST00000471978 TXNDC9O14530 226 aa21.44■■□□□ 1.02
C9orf3-213ENST00000471978 FFAR3O14843 346 aa21.44■■□□□ 1.02
C9orf3-213ENST00000471978 GPR42O15529 346 aa21.44■■□□□ 1.02
C9orf3-213ENST00000471978 SKIV2L2P42285 1042 aaKnown RBP21.44■■□□□ 1.02
C9orf3-213ENST00000471978 FNTAP49354 379 aa21.44■■□□□ 1.02
C9orf3-213ENST00000471978 RELAQ04206 551 aa21.44■■□□□ 1.02
C9orf3-213ENST00000471978 GARNL3Q5VVW2 1013 aa21.44■■□□□ 1.02
C9orf3-213ENST00000471978 UBE2R2Q712K3 238 aaPredicted RBP21.44■■□□□ 1.02
C9orf3-213ENST00000471978 PIWIL4Q7Z3Z4 852 aaKnown RBP21.44■■□□□ 1.02
C9orf3-213ENST00000471978 LRRC56Q8IYG6 542 aaPredicted RBP21.44■■□□□ 1.02
C9orf3-213ENST00000471978 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.44■■□□□ 1.02
C9orf3-213ENST00000471978 ACTRT1Q8TDG2 376 aa21.44■■□□□ 1.02
C9orf3-213ENST00000471978 MMABQ96EY8 250 aaPredicted RBP21.44■■□□□ 1.02
C9orf3-213ENST00000471978 CNDP1Q96KN2 507 aa21.44■■□□□ 1.02
C9orf3-213ENST00000471978 OSBPL9Q96SU4 736 aa21.44■■□□□ 1.02
C9orf3-213ENST00000471978 BARD1Q99728 777 aaKnown RBP21.44■■□□□ 1.02
C9orf3-213ENST00000471978 EBNA1BP2Q99848 306 aaKnown RBP21.44■■□□□ 1.02
C9orf3-213ENST00000471978 FAM167BQ9BTA0 163 aa21.44■■□□□ 1.02
C9orf3-213ENST00000471978 IARS2Q9NSE4 1012 aaKnown RBP21.44■■□□□ 1.02
C9orf3-213ENST00000471978 GOLGA6L10A0A0M3HER8 536 aa21.43■■□□□ 1.02
C9orf3-213ENST00000471978 IDSB3KWA1 339 aa21.43■■□□□ 1.02
C9orf3-213ENST00000471978 HAT1O14929 419 aa21.43■■□□□ 1.02
C9orf3-213ENST00000471978 DDAH2O95865 285 aa21.43■■□□□ 1.02
C9orf3-213ENST00000471978 ANXA5P08758 320 aa21.43■■□□□ 1.02
C9orf3-213ENST00000471978 SLC26A3P40879 764 aa21.43■■□□□ 1.02
C9orf3-213ENST00000471978 EMP2P54851 167 aa21.43■■□□□ 1.02
C9orf3-213ENST00000471978 ELOAQ14241 798 aaKnown RBP21.43■■□□□ 1.02
C9orf3-213ENST00000471978 PPP1R7Q15435 360 aa21.43■■□□□ 1.02
C9orf3-213ENST00000471978 HIST2H2BCQ6DN03 193 aa21.43■■□□□ 1.02
C9orf3-213ENST00000471978 ISLR2Q6UXK2 745 aa21.43■■□□□ 1.02
C9orf3-213ENST00000471978 LINC00696Q6ZRV3 163 aa21.43■■□□□ 1.02
C9orf3-213ENST00000471978 KCNMB4Q86W47 210 aa21.43■■□□□ 1.02
C9orf3-213ENST00000471978 PLD3Q8IV08 490 aa21.43■■□□□ 1.02
C9orf3-213ENST00000471978 SLC35F6Q8N357 371 aa21.43■■□□□ 1.02
C9orf3-213ENST00000471978 AMER3Q8N944 861 aa21.43■■□□□ 1.02
C9orf3-213ENST00000471978 AARSD1Q9BTE6 412 aaKnown RBP21.43■■□□□ 1.02
C9orf3-213ENST00000471978 AGPAT4Q9NRZ5 378 aa21.43■■□□□ 1.02
C9orf3-213ENST00000471978 C14orf105Q9NVL8 296 aa21.43■■□□□ 1.02
C9orf3-213ENST00000471978 HEATR5BQ9P2D3 2071 aa21.43■■□□□ 1.02
C9orf3-213ENST00000471978 CENPEQ02224 2701 aa21.42■■□□□ 1.02
C9orf3-213ENST00000471978 NSG1A0A0A6YYJ2 146 aa21.42■■□□□ 1.02
C9orf3-213ENST00000471978 H7BY64 318 aa21.42■■□□□ 1.02
C9orf3-213ENST00000471978 EIF3FO00303 357 aaPredicted RBP21.42■■□□□ 1.02
C9orf3-213ENST00000471978 PGAM1P18669 254 aa21.42■■□□□ 1.02
C9orf3-213ENST00000471978 CXCR2P25025 360 aa21.42■■□□□ 1.02
C9orf3-213ENST00000471978 IMPA1P29218 277 aa21.42■■□□□ 1.02
C9orf3-213ENST00000471978 PTK6Q13882 451 aa21.42■■□□□ 1.02
C9orf3-213ENST00000471978 ZNF169Q14929 603 aaPredicted RBP21.42■■□□□ 1.02
C9orf3-213ENST00000471978 RNASEH2BQ5TBB1 312 aaKnown RBP21.42■■□□□ 1.02
C9orf3-213ENST00000471978 NDUFAF7Q7L592 441 aa21.42■■□□□ 1.02
C9orf3-213ENST00000471978 KBTBD2Q8IY47 623 aa21.42■■□□□ 1.02
C9orf3-213ENST00000471978 ARHGEF39Q8N4T4 335 aa21.42■■□□□ 1.02
C9orf3-213ENST00000471978 PRAP1Q96NZ9 151 aa21.42■■□□□ 1.02
C9orf3-213ENST00000471978 DRC3Q9H069 523 aa21.42■■□□□ 1.02
C9orf3-213ENST00000471978 MKKSQ9NPJ1 570 aaPredicted RBP21.42■■□□□ 1.02
C9orf3-213ENST00000471978 TRMT6Q9UJA5 497 aaKnown RBP21.42■■□□□ 1.02
C9orf3-213ENST00000471978 DOPEY1Q5JWR5 2465 aa21.41■■□□□ 1.02
C9orf3-213ENST00000471978 CNTRLQ7Z7A1 2325 aa21.41■■□□□ 1.02
C9orf3-213ENST00000471978 A0A0A6YYC8 382 aaPredicted RBP21.41■■□□□ 1.02
C9orf3-213ENST00000471978 I3L1I5 382 aaPredicted RBP21.41■■□□□ 1.02
C9orf3-213ENST00000471978 P2RX6O15547 441 aa21.41■■□□□ 1.02
C9orf3-213ENST00000471978 FOXS1O43638 330 aa21.41■■□□□ 1.02
C9orf3-213ENST00000471978 KLHL18O94889 574 aa21.41■■□□□ 1.02
C9orf3-213ENST00000471978 HEXBP07686 556 aa21.41■■□□□ 1.02
C9orf3-213ENST00000471978 COX6A1P12074 109 aa21.41■■□□□ 1.02
C9orf3-213ENST00000471978 TSFMP43897 325 aaKnown RBP21.41■■□□□ 1.02
C9orf3-213ENST00000471978 MFAP5Q13361 173 aa21.41■■□□□ 1.02
C9orf3-213ENST00000471978 CRYMQ14894 314 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms