RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 ASF1AQ9Y294 204 aa8.85□□□□□ -0.99
PTPRE-207ENST00000471218 TMEM98Q9Y2Y6 226 aa8.85□□□□□ -0.99
PTPRE-207ENST00000471218 OR1A2Q9Y585 309 aa8.85□□□□□ -0.99
PTPRE-207ENST00000471218 PCDHGA11Q9Y5H2 935 aa8.85□□□□□ -0.99
PTPRE-207ENST00000471218 COLEC10Q9Y6Z7 277 aa8.85□□□□□ -0.99
PTPRE-207ENST00000471218 KALRNO60229 2985 aa8.85□□□□□ -0.99
PTPRE-207ENST00000471218 KCNE1BA0A087WTH5 132 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 SPTY2D1-AS1A0A0U1RR47 76 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 FAM149AA5PLN7 773 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 LRRC14BA6NHZ5 514 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 TMEM233B4DJY2 109 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 E7ENX8 843 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 ERVH48-1M5A8F1 160 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 FOXE1O00358 373 aaPredicted RBP8.84□□□□□ -0.99
PTPRE-207ENST00000471218 MANBAO00462 879 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 SKAP2O75563 359 aaPredicted RBP8.84□□□□□ -0.99
PTPRE-207ENST00000471218 RASGRP1O95267 797 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 CCNDBP1O95273 360 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 NPPAP01160 153 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 CAPN1P07384 714 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 EPORP19235 508 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 NCF2P19878 526 aaPredicted RBP8.84□□□□□ -0.99
PTPRE-207ENST00000471218 CXCR2P25025 360 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 PBLDP30039 288 aaPredicted RBP8.84□□□□□ -0.99
PTPRE-207ENST00000471218 RAB28P51157 221 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 ABATP80404 500 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 RHDQ02161 417 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 IRF8Q02556 426 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 TAP2Q03519 686 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 TARDBPQ13148 414 aaKnown RBP eCLIP8.84□□□□□ -0.99
PTPRE-207ENST00000471218 PDCD4Q53EL6 469 aaKnown RBP8.84□□□□□ -0.99
PTPRE-207ENST00000471218 ZNF648Q5T619 568 aaPredicted RBP8.84□□□□□ -0.99
PTPRE-207ENST00000471218 VWA5B1Q5TIE3 1220 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 FRG2Q64ET8 278 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 ATG9BQ674R7 924 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 NXNQ6DKJ4 435 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 CLEC6AQ6EIG7 209 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 DOK6Q6PKX4 331 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 HACD2Q6Y1H2 254 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 FAM83HQ6ZRV2 1179 aaPredicted RBP8.84□□□□□ -0.99
PTPRE-207ENST00000471218 THOC6Q86W42 341 aaKnown RBP8.84□□□□□ -0.99
PTPRE-207ENST00000471218 DDIASQ8IXT1 998 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 SYTL1Q8IYJ3 562 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 MIER2Q8N344 545 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 CDYL2Q8N8U2 506 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 SNX31Q8N9S9 440 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 GLB1L3Q8NCI6 653 aaPredicted RBP8.84□□□□□ -0.99
PTPRE-207ENST00000471218 ZNF248Q8NDW4 579 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 CFAP61Q8NHU2 1237 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 AGR3Q8TD06 166 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 STARD8Q92502 1023 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 TUBGCP3Q96CW5 907 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 BMFQ96LC9 184 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 ZNF578Q96N58 590 aaPredicted RBP8.84□□□□□ -0.99
PTPRE-207ENST00000471218 BBC3Q96PG8 261 aaPredicted RBP8.84□□□□□ -0.99
PTPRE-207ENST00000471218 FRG2BQ96QU4 278 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 PKP4Q99569 1192 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 TWSG1Q9GZX9 223 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 TUBB1Q9H4B7 451 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 ELOVL6Q9H5J4 265 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 WDR55Q9H6Y2 383 aaPredicted RBP8.84□□□□□ -0.99
PTPRE-207ENST00000471218 NT5DC2Q9H857 520 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 AKTIPQ9H8T0 292 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 PELI2Q9HAT8 420 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 FGF22Q9HCT0 170 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 TNFRSF12AQ9NP84 129 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 MRPL40Q9NQ50 206 aaKnown RBP8.84□□□□□ -0.99
PTPRE-207ENST00000471218 ARL8BQ9NVJ2 186 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 NOP53Q9NZM5 478 aaKnown RBP8.84□□□□□ -0.99
PTPRE-207ENST00000471218 OR6C2Q9NZP2 312 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 KLQ9UEF7 1012 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 CLCA2Q9UQC9 943 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 DYRK1BQ9Y463 629 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 ASB1Q9Y576 335 aa8.84□□□□□ -0.99
PTPRE-207ENST00000471218 COPG1Q9Y678 874 aaKnown RBP8.84□□□□□ -0.99
PTPRE-207ENST00000471218 COL5A1P20908 1838 aaPredicted RBP8.84□□□□□ -0.99
PTPRE-207ENST00000471218 ASH1LQ9NR48 2969 aaKnown RBP8.84□□□□□ -0.99
PTPRE-207ENST00000471218 LRRK1Q38SD2 2015 aa8.83□□□□□ -1
PTPRE-207ENST00000471218 SETXQ7Z333 2677 aaKnown RBP8.83□□□□□ -1
PTPRE-207ENST00000471218 NUMA1Q14980 2115 aa8.83□□□□□ -1
PTPRE-207ENST00000471218 KIR2DS5A0A0G2JLQ3 304 aa8.83□□□□□ -1
PTPRE-207ENST00000471218 A0A0G2JNG1 304 aa8.83□□□□□ -1
PTPRE-207ENST00000471218 POM121BA6NF01 834 aa8.83□□□□□ -1
PTPRE-207ENST00000471218 KIR2DS3K7RE56 304 aa8.83□□□□□ -1
PTPRE-207ENST00000471218 PSMD12O00232 456 aaPredicted RBP8.83□□□□□ -1
PTPRE-207ENST00000471218 GYG2O15488 501 aa8.83□□□□□ -1
PTPRE-207ENST00000471218 PRMT3O60678 531 aa8.83□□□□□ -1
PTPRE-207ENST00000471218 OR4F21O95013 312 aa8.83□□□□□ -1
PTPRE-207ENST00000471218 CBX6O95503 412 aa8.83□□□□□ -1
PTPRE-207ENST00000471218 JUNP05412 331 aaKnown RBP8.83□□□□□ -1
PTPRE-207ENST00000471218 KRT16P08779 473 aa8.83□□□□□ -1
PTPRE-207ENST00000471218 ALPPL2P10696 532 aa8.83□□□□□ -1
PTPRE-207ENST00000471218 ACP5P13686 325 aa8.83□□□□□ -1
PTPRE-207ENST00000471218 ACP1P24666 158 aa8.83□□□□□ -1
PTPRE-207ENST00000471218 PIK3R1P27986 724 aa8.83□□□□□ -1
PTPRE-207ENST00000471218 EPHA8P29322 1005 aaPredicted RBP8.83□□□□□ -1
PTPRE-207ENST00000471218 MAT2AP31153 395 aaKnown RBP8.83□□□□□ -1
PTPRE-207ENST00000471218 SHMT2P34897 504 aa8.83□□□□□ -1
PTPRE-207ENST00000471218 PIK3CBP42338 1070 aa8.83□□□□□ -1
PTPRE-207ENST00000471218 GNPDA1P46926 289 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms