RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 IL21RQ9HBE5 538 aa9.4□□□□□ -0.9
CCM2-204ENST00000470837 TNFRSF12AQ9NP84 129 aa9.4□□□□□ -0.9
CCM2-204ENST00000470837 GEMIN8Q9NWZ8 242 aaKnown RBP9.4□□□□□ -0.9
CCM2-204ENST00000470837 SPHK1Q9NYA1 384 aa9.4□□□□□ -0.9
CCM2-204ENST00000470837 ANKMY1Q9P2S6 941 aa9.4□□□□□ -0.9
CCM2-204ENST00000470837 NCDNQ9UBB6 729 aa9.4□□□□□ -0.9
CCM2-204ENST00000470837 ZFP69BQ9UJL9 534 aa9.4□□□□□ -0.9
CCM2-204ENST00000470837 ZNF225Q9UK10 706 aa9.4□□□□□ -0.9
CCM2-204ENST00000470837 VCANP13611 3396 aa9.4□□□□□ -0.9
CCM2-204ENST00000470837 THADAQ6YHU6 1953 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 SPAG17Q6Q759 2223 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 A0A0J9YY10 115 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 A0A1B0GTL3 188 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 ATP6AP2A0A1C7CYW4 349 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 A0A1W2PPV9 198 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 CPED1A4D0V7 1026 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 SDHDO14521 159 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 UBDO15205 165 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 PPM1DO15297 605 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 OR1F1O43749 312 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 PEX11AO75192 247 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 ATP6AP2O75787 350 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 MYO1DO94832 1006 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 PDYNP01213 254 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 SERPIND1P05546 499 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 ZNF883P0CG24 379 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 CDH3P22223 829 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 PIK3CBP42338 1070 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 GRK6P43250 576 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 CAPZBP47756 277 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 ARL4DP49703 201 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 IRX1P78414 480 aaPredicted RBP9.39□□□□□ -0.91
CCM2-204ENST00000470837 MEF2AQ02078 507 aaPredicted RBP9.39□□□□□ -0.91
CCM2-204ENST00000470837 CSTF3Q12996 717 aaKnown RBP9.39□□□□□ -0.91
CCM2-204ENST00000470837 ABRAXAS2Q15018 415 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 SHBQ15464 509 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 LSM12Q3MHD2 195 aaKnown RBP9.39□□□□□ -0.91
CCM2-204ENST00000470837 UGT3A2Q3SY77 523 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 GALNTL6Q49A17 601 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 TCHHL1Q5QJ38 904 aaPredicted RBP9.39□□□□□ -0.91
CCM2-204ENST00000470837 CACHD1Q5VU97 1274 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 RNF165Q6ZSG1 346 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 SPATA19Q7Z5L4 167 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 MTDHQ86UE4 582 aaKnown RBP9.39□□□□□ -0.91
CCM2-204ENST00000470837 C17orf82Q86X59 251 aaPredicted RBP9.39□□□□□ -0.91
CCM2-204ENST00000470837 PLXDC1Q8IUK5 500 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 SFTPA2Q8IWL1 248 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 PARP9Q8IXQ6 854 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 SLC35F3Q8IY50 421 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 EID2Q8N6I1 236 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 Q8N9G6 341 aaPredicted RBP9.39□□□□□ -0.91
CCM2-204ENST00000470837 FNDC5Q8NAU1 212 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 OR7G3Q8NG95 312 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 NCSTNQ92542 709 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 USP7Q93009 1102 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 RERGQ96A58 199 aaPredicted RBP9.39□□□□□ -0.91
CCM2-204ENST00000470837 ZUFSPQ96AP4 578 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 MTERF1Q99551 399 aaKnown RBP9.39□□□□□ -0.91
CCM2-204ENST00000470837 SERPINI1Q99574 410 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 LRFN3Q9BTN0 628 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 NT5DC2Q9H857 520 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 AKTIPQ9H8T0 292 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 BRF2Q9HAW0 419 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 AHSPQ9NZD4 102 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 SLC12A4Q9UP95 1085 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 EIF3LQ9Y262 564 aaKnown RBP9.39□□□□□ -0.91
CCM2-204ENST00000470837 PCDHGB2Q9Y5G2 931 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 RNF215Q9Y6U7 377 aa9.39□□□□□ -0.91
CCM2-204ENST00000470837 GON4LQ3T8J9 2241 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 KCNE1BA0A087WTH5 132 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 TRBC2A0A5B9 178 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 FOXE1O00358 373 aaPredicted RBP9.38□□□□□ -0.91
CCM2-204ENST00000470837 ZNF195O14628 629 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 FLRT2O43155 660 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 SIGLEC6O43699 453 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 FOXD2O60548 495 aaPredicted RBP9.38□□□□□ -0.91
CCM2-204ENST00000470837 SEC22BO75396 215 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 RASSF9O75901 435 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 RSL1D1O76021 490 aaKnown RBP9.38□□□□□ -0.91
CCM2-204ENST00000470837 SERPINA6P08185 405 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 ZNF806P0C7X5 589 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 PNLIPP16233 465 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 PCSK2P16519 638 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 PTX3P26022 381 aaPredicted RBP9.38□□□□□ -0.91
CCM2-204ENST00000470837 NEK2P51955 445 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 RAP1GDS1P52306 607 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 RPS15AP62244 130 aaKnown RBP9.38□□□□□ -0.91
CCM2-204ENST00000470837 REEP5Q00765 189 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 TGM3Q08188 693 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 ACSM2AQ08AH3 577 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 AP5B1Q2VPB7 878 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 AMZ1Q400G9 498 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 PLA2G2CQ5R387 149 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 ACSM2BQ68CK6 577 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 CCDC121Q6ZUS5 278 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 CHSY3Q70JA7 882 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 ZNF771Q7L3S4 317 aaPredicted RBP9.38□□□□□ -0.91
CCM2-204ENST00000470837 TRPM8Q7Z2W7 1104 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 MAVSQ7Z434 540 aa9.38□□□□□ -0.91
CCM2-204ENST00000470837 TRIM46Q7Z4K8 759 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms