RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 GARNL3Q5VVW2 1013 aa15.52■□□□□ 0.08
COL9A3-208ENST00000469802 LRRC8EQ6NSJ5 796 aa15.52■□□□□ 0.08
COL9A3-208ENST00000469802 CUZD1Q86UP6 607 aa15.52■□□□□ 0.08
COL9A3-208ENST00000469802 CNTN4Q8IWV2 1026 aa15.52■□□□□ 0.08
COL9A3-208ENST00000469802 AMER3Q8N944 861 aa15.52■□□□□ 0.08
COL9A3-208ENST00000469802 PPP4R1Q8TF05 950 aa15.52■□□□□ 0.08
COL9A3-208ENST00000469802 MIEF2Q96C03 454 aa15.52■□□□□ 0.08
COL9A3-208ENST00000469802 C19orf60Q96EN9 201 aa15.52■□□□□ 0.08
COL9A3-208ENST00000469802 CABS1Q96KC9 395 aa15.52■□□□□ 0.08
COL9A3-208ENST00000469802 BARD1Q99728 777 aaKnown RBP15.52■□□□□ 0.08
COL9A3-208ENST00000469802 DDX47Q9H0S4 455 aaKnown RBP15.52■□□□□ 0.08
COL9A3-208ENST00000469802 PLAC1Q9HBJ0 212 aa15.52■□□□□ 0.08
COL9A3-208ENST00000469802 IARS2Q9NSE4 1012 aaKnown RBP15.52■□□□□ 0.08
COL9A3-208ENST00000469802 CUEDC1Q9NWM3 386 aaPredicted RBP15.52■□□□□ 0.08
COL9A3-208ENST00000469802 PCYOX1Q9UHG3 505 aa15.52■□□□□ 0.08
COL9A3-208ENST00000469802 DOPEY1Q5JWR5 2465 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 BLACEA4D250 179 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 HAT1O14929 419 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 FOXS1O43638 330 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 ZBTB14O43829 449 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 BANF1O75531 89 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 TTC4O95801 387 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 SYF2O95926 243 aaKnown RBP15.51■□□□□ 0.07
COL9A3-208ENST00000469802 HPP00738 406 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 IVDP26440 423 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 GABRB3P28472 473 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 SLC26A3P40879 764 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 OCA2Q04671 838 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 MRPL49Q13405 166 aaKnown RBP15.51■□□□□ 0.07
COL9A3-208ENST00000469802 MSS51Q4VC12 460 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 VWA2Q5GFL6 755 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 FHL5Q5TD97 284 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 ATG9BQ674R7 924 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 UBE2R2Q712K3 238 aaPredicted RBP15.51■□□□□ 0.07
COL9A3-208ENST00000469802 ZADH2Q8N4Q0 377 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 VPS50Q96JG6 964 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 NDNQ99608 321 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 EBNA1BP2Q99848 306 aaKnown RBP15.51■□□□□ 0.07
COL9A3-208ENST00000469802 WDR77Q9BQA1 342 aaPredicted RBP15.51■□□□□ 0.07
COL9A3-208ENST00000469802 LHPPQ9H008 270 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 ILKAPQ9H0C8 392 aaPredicted RBP15.51■□□□□ 0.07
COL9A3-208ENST00000469802 GRPEL1Q9HAV7 217 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 ASF1BQ9NVP2 202 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 UTP6Q9NYH9 597 aaKnown RBP15.51■□□□□ 0.07
COL9A3-208ENST00000469802 ASIC3Q9UHC3 531 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 CDC14AQ9UNH5 594 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 CSAG2Q9Y5P2 127 aa15.51■□□□□ 0.07
COL9A3-208ENST00000469802 SCN2AQ99250 2005 aa15.5■□□□□ 0.07
COL9A3-208ENST00000469802 SCN3AQ9NY46 2000 aa15.5■□□□□ 0.07
COL9A3-208ENST00000469802 PRPF4O43172 522 aaKnown RBP eCLIP15.5■□□□□ 0.07
COL9A3-208ENST00000469802 SEMA7AO75326 666 aa15.5■□□□□ 0.07
COL9A3-208ENST00000469802 COX6A1P12074 109 aa15.5■□□□□ 0.07
COL9A3-208ENST00000469802 ACPPP15309 386 aa15.5■□□□□ 0.07
COL9A3-208ENST00000469802 TBPL1P62380 186 aa15.5■□□□□ 0.07
COL9A3-208ENST00000469802 DHX9Q08211 1270 aaKnown RBP15.5■□□□□ 0.07
COL9A3-208ENST00000469802 SP140Q13342 867 aa15.5■□□□□ 0.07
COL9A3-208ENST00000469802 SPANXN3Q5MJ09 141 aa15.5■□□□□ 0.07
COL9A3-208ENST00000469802 AGAP7PQ5VUJ5 663 aa15.5■□□□□ 0.07
COL9A3-208ENST00000469802 KIAA0408Q6ZU52 694 aa15.5■□□□□ 0.07
COL9A3-208ENST00000469802 GALNT7Q86SF2 657 aa15.5■□□□□ 0.07
COL9A3-208ENST00000469802 LAPTM4BQ86VI4 370 aa15.5■□□□□ 0.07
COL9A3-208ENST00000469802 IGDCC3Q8IVU1 814 aa15.5■□□□□ 0.07
COL9A3-208ENST00000469802 AGAP4Q96P64 663 aa15.5■□□□□ 0.07
COL9A3-208ENST00000469802 NAT9Q9BTE0 207 aa15.5■□□□□ 0.07
COL9A3-208ENST00000469802 TGIF2Q9GZN2 237 aa15.5■□□□□ 0.07
COL9A3-208ENST00000469802 DRC3Q9H069 523 aa15.5■□□□□ 0.07
COL9A3-208ENST00000469802 CCDC177Q9NQR7 707 aaPredicted RBP15.5■□□□□ 0.07
COL9A3-208ENST00000469802 C14orf105Q9NVL8 296 aa15.5■□□□□ 0.07
COL9A3-208ENST00000469802 TRMT6Q9UJA5 497 aaKnown RBP15.5■□□□□ 0.07
COL9A3-208ENST00000469802 C3orf18Q9UK00 162 aa15.5■□□□□ 0.07
COL9A3-208ENST00000469802 ADAMTS6Q9UKP5 1117 aa15.5■□□□□ 0.07
COL9A3-208ENST00000469802 PDE10AQ9Y233 779 aa15.5■□□□□ 0.07
COL9A3-208ENST00000469802 NTNG1Q9Y2I2 539 aa15.5■□□□□ 0.07
COL9A3-208ENST00000469802 IDSB3KWA1 339 aa15.49■□□□□ 0.07
COL9A3-208ENST00000469802 TXNDC9O14530 226 aa15.49■□□□□ 0.07
COL9A3-208ENST00000469802 MAP2K7O14733 419 aa15.49■□□□□ 0.07
COL9A3-208ENST00000469802 AGFG2O95081 481 aa15.49■□□□□ 0.07
COL9A3-208ENST00000469802 TSPAN12O95859 305 aa15.49■□□□□ 0.07
COL9A3-208ENST00000469802 C8GP07360 202 aa15.49■□□□□ 0.07
COL9A3-208ENST00000469802 RNF224P0DH78 156 aa15.49■□□□□ 0.07
COL9A3-208ENST00000469802 TCP1P17987 556 aaKnown RBP15.49■□□□□ 0.07
COL9A3-208ENST00000469802 SNRPNP63162 240 aaKnown RBP15.49■□□□□ 0.07
COL9A3-208ENST00000469802 FAM53BQ14153 422 aa15.49■□□□□ 0.07
COL9A3-208ENST00000469802 HIF1AQ16665 826 aa15.49■□□□□ 0.07
COL9A3-208ENST00000469802 RBM20Q5T481 1227 aaKnown RBP15.49■□□□□ 0.07
COL9A3-208ENST00000469802 UGT3A1Q6NUS8 523 aa15.49■□□□□ 0.07
COL9A3-208ENST00000469802 VN1R4Q7Z5H5 301 aa15.49■□□□□ 0.07
COL9A3-208ENST00000469802 PCGF5Q86SE9 256 aa15.49■□□□□ 0.07
COL9A3-208ENST00000469802 PLD3Q8IV08 490 aa15.49■□□□□ 0.07
COL9A3-208ENST00000469802 PARP9Q8IXQ6 854 aa15.49■□□□□ 0.07
COL9A3-208ENST00000469802 PRSS58Q8IYP2 241 aa15.49■□□□□ 0.07
COL9A3-208ENST00000469802 CISD2Q8N5K1 135 aaKnown RBP15.49■□□□□ 0.07
COL9A3-208ENST00000469802 EEF1AKMT1Q8WVE0 214 aa15.49■□□□□ 0.07
COL9A3-208ENST00000469802 RERGQ96A58 199 aaPredicted RBP15.49■□□□□ 0.07
COL9A3-208ENST00000469802 C8orf44Q96CB5 159 aa15.49■□□□□ 0.07
COL9A3-208ENST00000469802 CERS2Q96G23 380 aa15.49■□□□□ 0.07
COL9A3-208ENST00000469802 WDR83Q9BRX9 315 aaKnown RBP15.49■□□□□ 0.07
COL9A3-208ENST00000469802 MKKSQ9NPJ1 570 aaPredicted RBP15.49■□□□□ 0.07
COL9A3-208ENST00000469802 TAS2R13Q9NYV9 303 aa15.49■□□□□ 0.07
COL9A3-208ENST00000469802 TRPC4Q9UBN4 977 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms