RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 TMED2Q15363 201 aa12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 OR1C1Q15619 314 aa12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 BTBD16Q32M84 506 aa12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 GARNL3Q5VVW2 1013 aa12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 PLAG1Q6DJT9 500 aa12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 SPINK14Q6IE38 97 aa12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 C11orf63Q6NUN7 778 aa12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 H3F3CQ6NXT2 135 aa12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 LRRC8BQ6P9F7 803 aa12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 ZNF534Q76KX8 674 aa12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 ARHGEF39Q8N4T4 335 aa12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 SKA2Q8WVK7 121 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 METTL21AQ8WXB1 218 aa12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 SDCCAG3Q96C92 435 aa12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 SCMH1Q96GD3 660 aa12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 ZNF354BQ96LW1 612 aa12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 FRMD6Q96NE9 622 aa12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 DMRTA2Q96SC8 542 aa12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 VKORC1Q9BQB6 163 aa12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 PLCD4Q9BRC7 762 aa12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 UTP23Q9BRU9 249 aaKnown RBP12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 TRIM51Q9BSJ1 452 aa12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 TMEM121Q9BTD3 319 aa12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 ACAT2Q9BWD1 397 aa12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 RUVBL2Q9Y230 463 aaKnown RBP12.13□□□□□ -0.47
TRAPPC12-216ENST00000469400 A0A0U1RQJ8 604 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 PSMD3O43242 534 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 MFAP3LO75121 409 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 VPS26AO75436 327 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 ZNF189O75820 626 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 TJP3O95049 919 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 CMPK1P30085 196 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 CTNNA1P35221 906 aaKnown RBP12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 PPARGP37231 505 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 MAGEA1P43355 309 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 HSF1Q00613 529 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 P3H1Q32P28 736 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 FASTKD1Q53R41 847 aaKnown RBP12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 TSTD2Q5T7W7 516 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 AADACL2Q6P093 401 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 LANCL3Q6ZV70 420 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 CPEB2Q7Z5Q1 589 aaKnown RBP12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 LINC00523Q86TU6 105 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 LDB1Q86U70 411 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 CHERPQ8IWX8 916 aaKnown RBP12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 GHDCQ8N2G8 530 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 TAB3Q8N5C8 712 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 OR52K1Q8NGK4 314 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 OR6P1Q8NGX9 317 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 GSDMBQ8TAX9 411 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 ZNF778Q96MU6 729 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 OR2A5Q96R48 311 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 CYTH2Q99418 400 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 VN1R1Q9GZP7 353 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 DRC3Q9H069 523 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 PPT2Q9UMR5 302 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 TFR2Q9UP52 801 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 PCDHA3Q9Y5H8 950 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 MRFAP1Q9Y605 127 aa12.12□□□□□ -0.47
TRAPPC12-216ENST00000469400 IGKV1-8A0A0C4DH67 115 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 SYCE3A1L190 88 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 PRRG2O14669 202 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 PRMT5O14744 637 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 MAN1A2O60476 641 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 PHF2O75151 1096 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 TSPAN12O95859 305 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 TPM1P09493 284 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 CD99P14209 185 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 CD46P15529 392 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 IGFBP2P18065 325 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 CCNFP41002 786 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 GDF10P55107 478 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 SNRPNP63162 240 aaKnown RBP12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 ACVR1Q04771 509 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 MEP1AQ16819 746 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 PTRHD1Q6GMV3 140 aaKnown RBP12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 GALNTL5Q7Z4T8 443 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 FGD2Q7Z6J4 655 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 PAQR7Q86WK9 346 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 CRLF3Q8IUI8 442 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 SHISA5Q8N114 240 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 DNAAF3Q8N9W5 541 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 TMEM178AQ8NBL3 297 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 RERGQ96A58 199 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 NPAS2Q99743 824 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 TMUB1Q9BVT8 246 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 KCNK13Q9HB14 408 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 MRPS30Q9NP92 439 aaKnown RBP12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 COQ3Q9NZJ6 369 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 SPATA7Q9P0W8 599 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 TNFRSF10DQ9UBN6 386 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 RIMKLBQ9ULI2 386 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 R3HDM2Q9Y2K5 976 aaKnown RBP12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 ASB1Q9Y576 335 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 GTF3C1Q12789 2109 aa12.11□□□□□ -0.47
TRAPPC12-216ENST00000469400 ACANP16112 2415 aa12.1□□□□□ -0.47
TRAPPC12-216ENST00000469400 P2RX6O15547 441 aa12.1□□□□□ -0.47
TRAPPC12-216ENST00000469400 NEURL1O76050 574 aa12.1□□□□□ -0.47
TRAPPC12-216ENST00000469400 SP1P08047 785 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms