RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 CCNFP41002 786 aa11.64□□□□□ -0.55
HDAC3-204ENST00000469207 NPY2RP49146 381 aa11.64□□□□□ -0.55
HDAC3-204ENST00000469207 BASP1P80723 227 aaKnown RBP11.64□□□□□ -0.55
HDAC3-204ENST00000469207 DSG2Q14126 1118 aa11.64□□□□□ -0.55
HDAC3-204ENST00000469207 ANKRD20A4Q4UJ75 823 aa11.64□□□□□ -0.55
HDAC3-204ENST00000469207 FCRLBQ6BAA4 426 aa11.64□□□□□ -0.55
HDAC3-204ENST00000469207 MPP5Q8N3R9 675 aa11.64□□□□□ -0.55
HDAC3-204ENST00000469207 ARHGEF39Q8N4T4 335 aa11.64□□□□□ -0.55
HDAC3-204ENST00000469207 RAB42Q8N4Z0 105 aa11.64□□□□□ -0.55
HDAC3-204ENST00000469207 ITLN2Q8WWU7 325 aaPredicted RBP11.64□□□□□ -0.55
HDAC3-204ENST00000469207 RELTQ969Z4 430 aa11.64□□□□□ -0.55
HDAC3-204ENST00000469207 VPS50Q96JG6 964 aa11.64□□□□□ -0.55
HDAC3-204ENST00000469207 STMN3Q9NZ72 180 aa11.64□□□□□ -0.55
HDAC3-204ENST00000469207 SPATA7Q9P0W8 599 aa11.64□□□□□ -0.55
HDAC3-204ENST00000469207 MKL2Q9ULH7 1088 aa11.64□□□□□ -0.55
HDAC3-204ENST00000469207 GUCA1BQ9UMX6 200 aa11.64□□□□□ -0.55
HDAC3-204ENST00000469207 FBN2P35556 2912 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 TRAV17A0A0B4J275 112 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 A8MUI8 341 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 CCL21O00585 134 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 PSIP1O75475 530 aaKnown RBP11.63□□□□□ -0.55
HDAC3-204ENST00000469207 BMP10O95393 424 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 UQCRHP07919 91 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 ERGP11308 486 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 RPA3P35244 121 aaPredicted RBP11.63□□□□□ -0.55
HDAC3-204ENST00000469207 PNLIPRP1P54315 467 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 PRDX1Q06830 199 aaKnown RBP11.63□□□□□ -0.55
HDAC3-204ENST00000469207 CUL1Q13616 776 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 TRIP13Q15645 432 aaPredicted RBP11.63□□□□□ -0.55
HDAC3-204ENST00000469207 ICE2Q659A1 982 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 ZNF425Q6IV72 752 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 HIBCHQ6NVY1 386 aaPredicted RBP11.63□□□□□ -0.55
HDAC3-204ENST00000469207 LANCL3Q6ZV70 420 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 CENPUQ71F23 418 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 PRSS41Q7RTY9 318 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 LRRC6Q86X45 466 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 ZC3H7AQ8IWR0 971 aaKnown RBP11.63□□□□□ -0.55
HDAC3-204ENST00000469207 SPC24Q8NBT2 197 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 OR9A4Q8NGU2 314 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 MAGEC3Q8TD91 643 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 ZNF480Q8WV37 535 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 SMPDL3AQ92484 453 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 CCDC120Q96HB5 630 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 IMMP1LQ96LU5 166 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 KIFC1Q9BW19 673 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 IL22Q9GZX6 179 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 BFARQ9NZS9 450 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 PCYOX1Q9UHG3 505 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 CDC14AQ9UNH5 594 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 TEP1Q99973 2627 aaKnown RBP11.63□□□□□ -0.55
HDAC3-204ENST00000469207 APCP25054 2843 aa11.63□□□□□ -0.55
HDAC3-204ENST00000469207 ABCA12Q86UK0 2595 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 LOC102723996A0A087X1L8 192 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 E7ENX8 843 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 H7BY64 318 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 MYO1CO00159 1063 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 HAT1O14929 419 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 SEC24DO94855 1032 aaPredicted RBP11.62□□□□□ -0.55
HDAC3-204ENST00000469207 RASAL1O95294 804 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 SLC16A8O95907 504 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 SYF2O95926 243 aaKnown RBP11.62□□□□□ -0.55
HDAC3-204ENST00000469207 TAP2Q03519 686 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 ZNF33BQ06732 778 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 CDSNQ15517 529 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 CCNG2Q16589 344 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 TYSND1Q2T9J0 566 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 TMEM205Q6UW68 189 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 TMEM207Q6UWW9 146 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 NEK10Q6ZWH5 1172 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 ADCK2Q7Z695 626 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 MRGPRGQ86SM5 289 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 SDCCAG8Q86SQ7 713 aaPredicted RBP11.62□□□□□ -0.55
HDAC3-204ENST00000469207 GAS2L3Q86XJ1 694 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 REXO1L1PQ8IX06 675 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 LRRC56Q8IYG6 542 aaPredicted RBP11.62□□□□□ -0.55
HDAC3-204ENST00000469207 GIMAP7Q8NHV1 300 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 CCDC138Q96M89 665 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 PRAP1Q96NZ9 151 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 PHF12Q96QT6 1004 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 HES7Q9BYE0 225 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 FRMD8P1Q9BZ68 369 aaPredicted RBP11.62□□□□□ -0.55
HDAC3-204ENST00000469207 TGIF2Q9GZN2 237 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 ZNF700Q9H0M5 742 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 MKKSQ9NPJ1 570 aaPredicted RBP11.62□□□□□ -0.55
HDAC3-204ENST00000469207 ANKRD10Q9NXR5 420 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 DRG1Q9Y295 367 aaKnown RBP11.62□□□□□ -0.55
HDAC3-204ENST00000469207 MED16Q9Y2X0 877 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 HEATR5BQ9P2D3 2071 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 PDZD2O15018 2839 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 SCN3AQ9NY46 2000 aa11.62□□□□□ -0.55
HDAC3-204ENST00000469207 A0A1W2PQ72 361 aa11.61□□□□□ -0.55
HDAC3-204ENST00000469207 SMAPO00193 183 aa11.61□□□□□ -0.55
HDAC3-204ENST00000469207 MAN1A2O60476 641 aa11.61□□□□□ -0.55
HDAC3-204ENST00000469207 VPS26AO75436 327 aa11.61□□□□□ -0.55
HDAC3-204ENST00000469207 ANXA5P08758 320 aa11.61□□□□□ -0.55
HDAC3-204ENST00000469207 PKMP14618 531 aaKnown RBP11.61□□□□□ -0.55
HDAC3-204ENST00000469207 ELAVL4P26378 380 aaKnown RBP11.61□□□□□ -0.55
HDAC3-204ENST00000469207 CLCN7P51798 805 aa11.61□□□□□ -0.55
HDAC3-204ENST00000469207 EMP3P54852 163 aa11.61□□□□□ -0.55
HDAC3-204ENST00000469207 CTBP1Q13363 440 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms