RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 FZD3Q9NPG1 666 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 WASH6PQ9NQA3 447 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 GEMIN8Q9NWZ8 242 aaKnown RBP9.02□□□□□ -0.97
SMC1A-205ENST00000469129 C6orf203Q9P0P8 240 aaPredicted RBP9.02□□□□□ -0.97
SMC1A-205ENST00000469129 CD300AQ9UGN4 299 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 CIDEBQ9UHD4 219 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 GPSM3Q9Y4H4 160 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 PCDHA9Q9Y5H5 950 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 PCYT1BQ9Y5K3 369 aaPredicted RBP9.02□□□□□ -0.97
SMC1A-205ENST00000469129 HS3ST3A1Q9Y663 406 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 MUC3AQ02505 3323 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 CUL9Q8IWT3 2517 aa9.02□□□□□ -0.97
SMC1A-205ENST00000469129 PRR19A6NJB7 356 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 AQP12BA6NM10 295 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 PRAMEF26H0Y7S4 382 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 ACOT8O14734 319 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 LATO43561 262 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 ERN1O75460 977 aaKnown RBP9.01□□□□□ -0.97
SMC1A-205ENST00000469129 SORBS2O94875 1100 aaKnown RBP9.01□□□□□ -0.97
SMC1A-205ENST00000469129 BAG2O95816 211 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 PGRP06401 933 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 MTHFD1P11586 935 aaKnown RBP9.01□□□□□ -0.97
SMC1A-205ENST00000469129 DDX5P17844 614 aaKnown RBP9.01□□□□□ -0.97
SMC1A-205ENST00000469129 TCN1P20061 433 aaPredicted RBP9.01□□□□□ -0.97
SMC1A-205ENST00000469129 GSTM2P28161 218 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 PKLRP30613 574 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 ACSL1P33121 698 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 RABIFP47224 123 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 RAB28P51157 221 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 NEK2P51955 445 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 MTX3Q5HYI7 312 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 PAGE3Q5JUK9 113 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 WLSQ5T9L3 541 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 KIAA0895LQ68EN5 471 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 LCN8Q6JVE9 175 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 SLC2A7Q6PXP3 512 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 WASH2PQ6VEQ5 465 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 GPR180Q86V85 440 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 AQP12AQ8IXF9 295 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 SLC15A3Q8IY34 581 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 PHACTR4Q8IZ21 702 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 TMEM132CQ8N3T6 1108 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 TBC1D19Q8N5T2 526 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 RNF148Q8N7C7 305 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 HIPK4Q8NE63 616 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 TSTD1Q8NFU3 115 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 SPDYE1Q8NFV5 336 aaPredicted RBP9.01□□□□□ -0.97
SMC1A-205ENST00000469129 OR2L8Q8NGY9 312 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 HUS1BQ8NHY5 278 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 PYDC1Q8WXC3 89 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 POP5Q969H6 163 aaKnown RBP9.01□□□□□ -0.97
SMC1A-205ENST00000469129 ZUFSPQ96AP4 578 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 TMEM125Q96AQ2 219 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 APIPQ96GX9 242 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 SHDQ96IW2 340 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 ITCHQ96J02 903 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 CAMK1GQ96NX5 476 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 INSM2Q96T92 566 aaPredicted RBP9.01□□□□□ -0.97
SMC1A-205ENST00000469129 MTERF1Q99551 399 aaKnown RBP9.01□□□□□ -0.97
SMC1A-205ENST00000469129 PRPF18Q99633 342 aaKnown RBP9.01□□□□□ -0.97
SMC1A-205ENST00000469129 CGREF1Q99674 301 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 MYOCQ99972 504 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 KCTD14Q9BQ13 255 aaPredicted RBP9.01□□□□□ -0.97
SMC1A-205ENST00000469129 SLC39A3Q9BRY0 314 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 CENPKQ9BS16 269 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 TACO1Q9BSH4 297 aaKnown RBP9.01□□□□□ -0.97
SMC1A-205ENST00000469129 ALG2Q9H553 416 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 NT5DC2Q9H857 520 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 FGF22Q9HCT0 170 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 DMRT3Q9NQL9 472 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 TM7SF3Q9NS93 570 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 IMP3Q9NV31 184 aaKnown RBP9.01□□□□□ -0.97
SMC1A-205ENST00000469129 FAM120CQ9NX05 1096 aaKnown RBP9.01□□□□□ -0.97
SMC1A-205ENST00000469129 SIRT5Q9NXA8 310 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 AHSPQ9NZD4 102 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 ACTR3BQ9P1U1 418 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 TAC3Q9UHF0 121 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 MAGEL2Q9UJ55 1249 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 KCNK6Q9Y257 313 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 MAN2B2Q9Y2E5 1009 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 DLGAP4Q9Y2H0 992 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 COLEC10Q9Y6Z7 277 aa9.01□□□□□ -0.97
SMC1A-205ENST00000469129 A0A096LPI6 279 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 PRORSD1PA6NEY8 169 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 MAGEB17A8MXT2 336 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 TNFRSF10AO00220 468 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 ZNF217O75362 1048 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 GMNNO75496 209 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 SNRNP200O75643 2136 aaKnown RBP9□□□□□ -0.97
SMC1A-205ENST00000469129 SEMA3DO95025 777 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 CDH1P12830 882 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 COX7A2P14406 83 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 HRH2P25021 359 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 RPL10P27635 214 aaKnown RBP9□□□□□ -0.97
SMC1A-205ENST00000469129 HTR1EP28566 365 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 SHMT2P34897 504 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 KIR3DL1P43629 444 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 GSTM5P46439 218 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 CCR8P51685 355 aa9□□□□□ -0.97
SMC1A-205ENST00000469129 RPS13P62277 151 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms