RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 H0YAE9 185 aa4.53□□□□□ -1.68
XRN1-207ENST00000468894 RPS6KA5O75582 802 aa4.53□□□□□ -1.68
XRN1-207ENST00000468894 RPL35AP18077 110 aaKnown RBP4.53□□□□□ -1.68
XRN1-207ENST00000468894 EEF1DP29692 281 aaKnown RBP4.53□□□□□ -1.68
XRN1-207ENST00000468894 RAD23AP54725 363 aa4.53□□□□□ -1.68
XRN1-207ENST00000468894 XGP55808 180 aa4.53□□□□□ -1.68
XRN1-207ENST00000468894 HUNKP57058 714 aa4.53□□□□□ -1.68
XRN1-207ENST00000468894 MYL7Q01449 175 aa4.53□□□□□ -1.68
XRN1-207ENST00000468894 TRIM29Q14134 588 aa4.53□□□□□ -1.68
XRN1-207ENST00000468894 MTF1Q14872 753 aa4.53□□□□□ -1.68
XRN1-207ENST00000468894 NECTIN1Q15223 517 aa4.53□□□□□ -1.68
XRN1-207ENST00000468894 LYSMD4Q5XG99 296 aa4.53□□□□□ -1.68
XRN1-207ENST00000468894 LRRTM1Q86UE6 522 aa4.53□□□□□ -1.68
XRN1-207ENST00000468894 EXT2Q93063 718 aa4.53□□□□□ -1.68
XRN1-207ENST00000468894 WWTR1Q9GZV5 400 aa4.53□□□□□ -1.68
XRN1-207ENST00000468894 CCDC177Q9NQR7 707 aaPredicted RBP4.53□□□□□ -1.68
XRN1-207ENST00000468894 NFKBIL1Q9UBC1 381 aaPredicted RBP4.53□□□□□ -1.68
XRN1-207ENST00000468894 NOTCH3Q9UM47 2321 aa4.52□□□□□ -1.69
XRN1-207ENST00000468894 TRIM49P0CI25 452 aa4.52□□□□□ -1.69
XRN1-207ENST00000468894 TRIM49CP0CI26 452 aa4.52□□□□□ -1.69
XRN1-207ENST00000468894 ERCC2P18074 760 aa4.52□□□□□ -1.69
XRN1-207ENST00000468894 UGT1A4P22310 534 aa4.52□□□□□ -1.69
XRN1-207ENST00000468894 HNF4AP41235 474 aa4.52□□□□□ -1.69
XRN1-207ENST00000468894 CYCSP99999 105 aaKnown RBP4.52□□□□□ -1.69
XRN1-207ENST00000468894 KCTD2Q14681 263 aa4.52□□□□□ -1.69
XRN1-207ENST00000468894 PTGISQ16647 500 aa4.52□□□□□ -1.69
XRN1-207ENST00000468894 HYAL4Q2M3T9 481 aa4.52□□□□□ -1.69
XRN1-207ENST00000468894 LACTB2Q53H82 288 aaPredicted RBP4.52□□□□□ -1.69
XRN1-207ENST00000468894 C2CD6Q53TS8 623 aa4.52□□□□□ -1.69
XRN1-207ENST00000468894 SUSD4Q5VX71 490 aa4.52□□□□□ -1.69
XRN1-207ENST00000468894 DOK6Q6PKX4 331 aa4.52□□□□□ -1.69
XRN1-207ENST00000468894 METTL7BQ6UX53 244 aa4.52□□□□□ -1.69
XRN1-207ENST00000468894 PPP1R21Q6ZMI0 780 aa4.52□□□□□ -1.69
XRN1-207ENST00000468894 CHST3Q7LGC8 479 aa4.52□□□□□ -1.69
XRN1-207ENST00000468894 TSACCQ96A04 125 aaPredicted RBP4.52□□□□□ -1.69
XRN1-207ENST00000468894 FAM218AQ96MZ4 157 aa4.52□□□□□ -1.69
XRN1-207ENST00000468894 UPF3AQ9H1J1 476 aaKnown RBP4.52□□□□□ -1.69
XRN1-207ENST00000468894 XAB2Q9HCS7 855 aaKnown RBP4.52□□□□□ -1.69
XRN1-207ENST00000468894 TERF2IPQ9NYB0 399 aa4.52□□□□□ -1.69
XRN1-207ENST00000468894 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.52□□□□□ -1.69
XRN1-207ENST00000468894 POLLQ9UGP5 575 aa4.52□□□□□ -1.69
XRN1-207ENST00000468894 CSNK1G3Q9Y6M4 447 aa4.52□□□□□ -1.69
XRN1-207ENST00000468894 RECQL5O94762 991 aaPredicted RBP4.51□□□□□ -1.69
XRN1-207ENST00000468894 IGHEP01854 428 aa4.51□□□□□ -1.69
XRN1-207ENST00000468894 CCDC175P0C221 793 aa4.51□□□□□ -1.69
XRN1-207ENST00000468894 PRKACGP22612 351 aa4.51□□□□□ -1.69
XRN1-207ENST00000468894 HLA-FP30511 346 aa4.51□□□□□ -1.69
XRN1-207ENST00000468894 ALDH1B1P30837 517 aa4.51□□□□□ -1.69
XRN1-207ENST00000468894 ILF2Q12905 390 aaKnown RBP4.51□□□□□ -1.69
XRN1-207ENST00000468894 CDH18Q13634 790 aa4.51□□□□□ -1.69
XRN1-207ENST00000468894 TMEM132DQ14C87 1099 aa4.51□□□□□ -1.69
XRN1-207ENST00000468894 CTR9Q6PD62 1173 aa4.51□□□□□ -1.69
XRN1-207ENST00000468894 LRTM2Q8N967 370 aa4.51□□□□□ -1.69
XRN1-207ENST00000468894 PRSS33Q8NF86 280 aa4.51□□□□□ -1.69
XRN1-207ENST00000468894 C2orf48Q96LS8 159 aa4.51□□□□□ -1.69
XRN1-207ENST00000468894 RMDN2Q96LZ7 410 aa4.51□□□□□ -1.69
XRN1-207ENST00000468894 KLHL5Q96PQ7 755 aa4.51□□□□□ -1.69
XRN1-207ENST00000468894 EGFL8Q99944 293 aa4.51□□□□□ -1.69
XRN1-207ENST00000468894 NYXQ9GZU5 481 aa4.51□□□□□ -1.69
XRN1-207ENST00000468894 OR10A4Q9H209 315 aa4.51□□□□□ -1.69
XRN1-207ENST00000468894 MMP24Q9Y5R2 645 aa4.51□□□□□ -1.69
XRN1-207ENST00000468894 TRBV4-1A0A0J9YWV2 114 aa4.5□□□□□ -1.69
XRN1-207ENST00000468894 MPTX1A8MV57 137 aa4.5□□□□□ -1.69
XRN1-207ENST00000468894 KPNA7A9QM74 516 aa4.5□□□□□ -1.69
XRN1-207ENST00000468894 ACAT1P24752 427 aaKnown RBP4.5□□□□□ -1.69
XRN1-207ENST00000468894 SOX3P41225 446 aa4.5□□□□□ -1.69
XRN1-207ENST00000468894 OR3A2P47893 321 aa4.5□□□□□ -1.69
XRN1-207ENST00000468894 MTCP1P56278 107 aa4.5□□□□□ -1.69
XRN1-207ENST00000468894 CALCOCO2Q13137 446 aa4.5□□□□□ -1.69
XRN1-207ENST00000468894 TRA2AQ13595 282 aaKnown RBP eCLIP4.5□□□□□ -1.69
XRN1-207ENST00000468894 ENPP2Q13822 863 aa4.5□□□□□ -1.69
XRN1-207ENST00000468894 TAB1Q15750 504 aa4.5□□□□□ -1.69
XRN1-207ENST00000468894 SNAI3Q3KNW1 292 aa4.5□□□□□ -1.69
XRN1-207ENST00000468894 C1orf141Q5JVX7 400 aa4.5□□□□□ -1.69
XRN1-207ENST00000468894 KIF6Q6ZMV9 814 aa4.5□□□□□ -1.69
XRN1-207ENST00000468894 CNDP2Q96KP4 475 aaKnown RBP4.5□□□□□ -1.69
XRN1-207ENST00000468894 FER1L6-AS2Q96M78 137 aa4.5□□□□□ -1.69
XRN1-207ENST00000468894 PI4K2AQ9BTU6 479 aa4.5□□□□□ -1.69
XRN1-207ENST00000468894 TDRD1Q9BXT4 1180 aaKnown RBP4.5□□□□□ -1.69
XRN1-207ENST00000468894 FN3KQ9H479 309 aa4.5□□□□□ -1.69
XRN1-207ENST00000468894 ACTL8Q9H568 366 aa4.5□□□□□ -1.69
XRN1-207ENST00000468894 MED20Q9H944 212 aa4.5□□□□□ -1.69
XRN1-207ENST00000468894 IGSF1Q8N6C5 1336 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 IGKV3D-20A0A0C4DH25 116 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 MTMR11A4FU01 709 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 E9PQ18 207 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 CCDC188H7C350 402 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 SOCS3O14543 225 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 PI15O43692 258 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 PENKP01210 267 aaPredicted RBP4.49□□□□□ -1.69
XRN1-207ENST00000468894 SERPING1P05155 500 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 TCF4P15884 667 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 CDC25CP30307 473 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 HSD17B3P37058 310 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 TSFMP43897 325 aaKnown RBP4.49□□□□□ -1.69
XRN1-207ENST00000468894 IRX4P78413 519 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 SRSF9Q13242 221 aaKnown RBP eCLIP4.49□□□□□ -1.69
XRN1-207ENST00000468894 NFATC2Q13469 925 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 OPCMLQ14982 345 aa4.49□□□□□ -1.69
XRN1-207ENST00000468894 PTPN14Q15678 1187 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms