RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 KPNA7A9QM74 516 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 H0Y8G0 127 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 SLC30A4O14863 429 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 PAPSS1O43252 624 aaPredicted RBP3.53□□□□□ -1.84
VPS50-209ENST00000467326 BUD23O43709 281 aaKnown RBP3.53□□□□□ -1.84
VPS50-209ENST00000467326 SYNGR3O43761 229 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 HSF2BPO75031 334 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 PDE9AO76083 593 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 STAMBPO95630 424 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 TRUB2O95900 331 aaKnown RBP3.53□□□□□ -1.84
VPS50-209ENST00000467326 S100A9P06702 114 aaKnown RBP3.53□□□□□ -1.84
VPS50-209ENST00000467326 ASGR1P07306 291 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 ZNF23P17027 643 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 EPORP19235 508 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 ITIH1P19827 911 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 GLRA2P23416 452 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 PSMA5P28066 241 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 RFC4P35249 363 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 CDKN1AP38936 164 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 EPS15P42566 896 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 MLLT10P55197 1068 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 LINC01547P58512 204 aaPredicted RBP3.53□□□□□ -1.84
VPS50-209ENST00000467326 RPL24P83731 157 aaKnown RBP3.53□□□□□ -1.84
VPS50-209ENST00000467326 SREBF2Q12772 1141 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 PPIGQ13427 754 aaKnown RBP eCLIP3.53□□□□□ -1.84
VPS50-209ENST00000467326 GPM6BQ13491 265 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 NAB2Q15742 525 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 SNAPC1Q16533 368 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 MRGPRG-AS1Q2M3A8 158 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 ASTE1Q2TB18 679 aaPredicted RBP3.53□□□□□ -1.84
VPS50-209ENST00000467326 LRIF1Q5T3J3 769 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 NSUN5P2Q63ZY6 315 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 ACSM2BQ68CK6 577 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 PM20D1Q6GTS8 502 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 ADAM5Q6NVV9 412 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 ZCCHC12Q6PEW1 402 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 TLK2Q86UE8 772 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 CCDC190Q86UF4 302 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 CFAP206Q8IYR0 622 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 ELMOD2Q8IZ81 293 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 BATF2Q8N1L9 274 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 GUF1Q8N442 669 aaKnown RBP3.53□□□□□ -1.84
VPS50-209ENST00000467326 SFRP1Q8N474 314 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 CNBD1Q8NA66 436 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 BBOF1Q8ND07 529 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 KLHDC9Q8NEP7 349 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 GRAPLQ8TC17 118 aaPredicted RBP3.53□□□□□ -1.84
VPS50-209ENST00000467326 HM13Q8TCT9 377 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 AGR3Q8TD06 166 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 RAPGEF5Q92565 580 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 ZKSCAN4Q969J2 545 aaPredicted RBP3.53□□□□□ -1.84
VPS50-209ENST00000467326 SLAMF9Q96A28 289 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 TMEM186Q96B77 213 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 SCRN2Q96FV2 425 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 WBP1Q96G27 269 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 EPSTI1Q96J88 318 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 EGLN2Q96KS0 407 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 RMDN2Q96LZ7 410 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 NSMCE2Q96MF7 247 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 ZNF558Q96NG5 402 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 INPP5KQ9BT40 448 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 TEX13AQ9BXU3 409 aaPredicted RBP3.53□□□□□ -1.84
VPS50-209ENST00000467326 NFKBIZQ9BYH8 718 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 PUS3Q9BZE2 481 aaKnown RBP3.53□□□□□ -1.84
VPS50-209ENST00000467326 ZNF350Q9GZX5 532 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 PLK3Q9H4B4 646 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 TFB2MQ9H5Q4 396 aaKnown RBP3.53□□□□□ -1.84
VPS50-209ENST00000467326 YY1AP1Q9H869 796 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 GLRX2Q9NS18 164 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 WSB2Q9NYS7 404 aaPredicted RBP3.53□□□□□ -1.84
VPS50-209ENST00000467326 BAIAP2L1Q9UHR4 511 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 GAB2Q9UQC2 676 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 CHTOPQ9Y3Y2 248 aaKnown RBP3.53□□□□□ -1.84
VPS50-209ENST00000467326 U3KQV3 271 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 KIF26BQ2KJY2 2108 aa3.53□□□□□ -1.84
VPS50-209ENST00000467326 TMEM94Q12767 1356 aa3.52□□□□□ -1.85
VPS50-209ENST00000467326 LOC102723996A0A087X1L8 192 aa3.52□□□□□ -1.85
VPS50-209ENST00000467326 C13orf42A0A1B0GVH6 325 aa3.52□□□□□ -1.85
VPS50-209ENST00000467326 A0A1B0GWJ7 208 aa3.52□□□□□ -1.85
VPS50-209ENST00000467326 XKRY2A2RUG3 117 aa3.52□□□□□ -1.85
VPS50-209ENST00000467326 ANKRD66B4E2M5 251 aa3.52□□□□□ -1.85
VPS50-209ENST00000467326 E9PBE3 544 aa3.52□□□□□ -1.85
VPS50-209ENST00000467326 CLDN3O15551 220 aa3.52□□□□□ -1.85
VPS50-209ENST00000467326 EDIL3O43854 480 aa3.52□□□□□ -1.85
VPS50-209ENST00000467326 MTX2O75431 263 aa3.52□□□□□ -1.85
VPS50-209ENST00000467326 GPC4O75487 556 aa3.52□□□□□ -1.85
VPS50-209ENST00000467326 SPAG6O75602 509 aa3.52□□□□□ -1.85
VPS50-209ENST00000467326 AKAP3O75969 853 aa3.52□□□□□ -1.85
VPS50-209ENST00000467326 RHOBTB1O94844 696 aa3.52□□□□□ -1.85
VPS50-209ENST00000467326 SLCO2B1O94956 709 aa3.52□□□□□ -1.85
VPS50-209ENST00000467326 PAHP00439 452 aa3.52□□□□□ -1.85
VPS50-209ENST00000467326 AK1P00568 194 aa3.52□□□□□ -1.85
VPS50-209ENST00000467326 TGFAP01135 160 aa3.52□□□□□ -1.85
VPS50-209ENST00000467326 RLN1P04808 185 aa3.52□□□□□ -1.85
VPS50-209ENST00000467326 FAM58BPP0C7Q3 252 aa3.52□□□□□ -1.85
VPS50-209ENST00000467326 CFC1BP0CG36 223 aa3.52□□□□□ -1.85
VPS50-209ENST00000467326 CFC1P0CG37 223 aa3.52□□□□□ -1.85
VPS50-209ENST00000467326 FGF5P12034 268 aa3.52□□□□□ -1.85
VPS50-209ENST00000467326 AREGP15514 252 aa3.52□□□□□ -1.85
VPS50-209ENST00000467326 PAX1P15863 534 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms