RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 SERTAD3Q9UJW9 196 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 SNX7Q9UNH6 387 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 SRPK3Q9UPE1 567 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 ASB1Q9Y576 335 aa10.58□□□□□ -0.72
MSH5-212ENST00000467319 CHD6Q8TD26 2715 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 CACNA1BQ00975 2339 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 PCM1Q15154 2024 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 KCNE1BA0A087WTH5 132 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 LOC105369274A0A096LPK9 316 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 LOC102723532A0A0G2JNH3 316 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 NCF1BA6NI72 391 aaPredicted RBP10.57□□□□□ -0.72
MSH5-212ENST00000467319 SYCE1LA8MT33 242 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 NCF1CA8MVU1 366 aaPredicted RBP10.57□□□□□ -0.72
MSH5-212ENST00000467319 SUPT3HB4E1H0 165 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 E7EQ34 232 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 UBXN8O00124 270 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 KLK10O43240 276 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 ZNF749O43361 778 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 SRPX2O60687 465 aaPredicted RBP10.57□□□□□ -0.72
MSH5-212ENST00000467319 CDH16O75309 829 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 SUPT3HO75486 399 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 NCF1P14598 390 aaPredicted RBP10.57□□□□□ -0.72
MSH5-212ENST00000467319 EPORP19235 508 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 WT1P19544 449 aaPredicted RBP10.57□□□□□ -0.72
MSH5-212ENST00000467319 ITPKBP27987 946 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 ATP1A2P50993 1020 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 REEP5Q00765 189 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 ABHD18Q0P651 414 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 SRSF6Q13247 344 aaKnown RBP10.57□□□□□ -0.72
MSH5-212ENST00000467319 E2F2Q14209 437 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 SETDB1Q15047 1291 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 TCTE1Q5JU00 501 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 FBXO42Q6P3S6 717 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 KLC3Q6P597 504 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 TLDC1Q6P9B6 456 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 FAM198BQ6UWH4 519 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 C6orf15Q6UXA7 325 aaPredicted RBP10.57□□□□□ -0.72
MSH5-212ENST00000467319 LRRC70Q7Z2Q7 622 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 VN1R4Q7Z5H5 301 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 VASH2Q86V25 355 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 GPR135Q8IZ08 494 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 OR4N4Q8N0Y3 316 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 SNRNP27Q8WVK2 155 aaKnown RBP10.57□□□□□ -0.72
MSH5-212ENST00000467319 SLC5A11Q8WWX8 675 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 EXT2Q93063 718 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 RNF31Q96EP0 1072 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 CABS1Q96KC9 395 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 GBP5Q96PP8 586 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 SELENOSQ9BQE4 189 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 CCDC77Q9BR77 488 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 SPRTNQ9H040 489 aaPredicted RBP10.57□□□□□ -0.72
MSH5-212ENST00000467319 CNOT10Q9H9A5 744 aaKnown RBP10.57□□□□□ -0.72
MSH5-212ENST00000467319 PELI2Q9HAT8 420 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 RRAGDQ9NQL2 400 aaPredicted RBP10.57□□□□□ -0.72
MSH5-212ENST00000467319 ABCF3Q9NUQ8 709 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 ZNF358Q9NW07 568 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 WWOXQ9NZC7 414 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 CD274Q9NZQ7 290 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 XPR1Q9UBH6 696 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 LGALS13Q9UHV8 139 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 SLC22A14Q9Y267 594 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 AP1M2Q9Y6Q5 423 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 CACNA1GO43497 2377 aa10.57□□□□□ -0.72
MSH5-212ENST00000467319 MDC1Q14676 2089 aaKnown RBP10.56□□□□□ -0.72
MSH5-212ENST00000467319 A0A0J9YVX5 310 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 LOC101059948A0A1B0GTJ6 334 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 H0YGG7 62 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 H7BY64 318 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 TK2O00142 265 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 P2RX6O15547 441 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 WDR47O94967 919 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 MED26O95402 600 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 ONECUT2O95948 504 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 MT-ND3P03897 115 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 NTRK1P04629 796 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 HBQ1P09105 142 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 SBK3P0C264 359 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 LIFP15018 202 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 ITGAXP20702 1163 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 BCL6P41182 706 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 GDF5P43026 501 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 SLCO1A2P46721 670 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 HSPA7P48741 367 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 AGTR2P50052 363 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 CCR8P51685 355 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 EMP3P54852 163 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 ALDH18A1P54886 795 aaKnown RBP10.56□□□□□ -0.72
MSH5-212ENST00000467319 UCNP55089 124 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 VSX2P58304 361 aaPredicted RBP10.56□□□□□ -0.72
MSH5-212ENST00000467319 ARF3P61204 181 aaPredicted RBP10.56□□□□□ -0.72
MSH5-212ENST00000467319 RPS15AP62244 130 aaKnown RBP10.56□□□□□ -0.72
MSH5-212ENST00000467319 PCDH1Q08174 1060 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 CDC16Q13042 620 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 GRM7Q14831 915 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 CATSPEREQ5SY80 951 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 YOD1Q5VVQ6 348 aaPredicted RBP10.56□□□□□ -0.72
MSH5-212ENST00000467319 SLCO4C1Q6ZQN7 724 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 TMPRSS11BQ86T26 416 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 PLD3Q8IV08 490 aa10.56□□□□□ -0.72
MSH5-212ENST00000467319 DSELQ8IZU8 1212 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms