RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 KRT20P35900 424 aa3.53□□□□□ -1.84
SMC4-207ENST00000467263 LIMK1P53667 647 aa3.53□□□□□ -1.84
SMC4-207ENST00000467263 HUNKP57058 714 aa3.53□□□□□ -1.84
SMC4-207ENST00000467263 EFTUD2Q15029 972 aaKnown RBP eCLIP3.53□□□□□ -1.842e-12■□□□□ 10.1
SMC4-207ENST00000467263 KYNUQ16719 465 aa3.53□□□□□ -1.84
SMC4-207ENST00000467263 TAF1BQ53T94 588 aaPredicted RBP3.53□□□□□ -1.84
SMC4-207ENST00000467263 SLC30A6Q6NXT4 461 aa3.53□□□□□ -1.84
SMC4-207ENST00000467263 CLEC4GQ6UXB4 293 aa3.53□□□□□ -1.84
SMC4-207ENST00000467263 LEKR1Q6ZMV7 388 aa3.53□□□□□ -1.84
SMC4-207ENST00000467263 IL17RELQ6ZVW7 336 aa3.53□□□□□ -1.84
SMC4-207ENST00000467263 RYBPQ8N488 228 aaPredicted RBP3.53□□□□□ -1.84
SMC4-207ENST00000467263 PI4KAP1Q8N8J0 262 aa3.53□□□□□ -1.84
SMC4-207ENST00000467263 RASGEF1AQ8N9B8 481 aa3.53□□□□□ -1.84
SMC4-207ENST00000467263 MRPS27Q92552 414 aaKnown RBP3.53□□□□□ -1.84
SMC4-207ENST00000467263 MAP3K3Q99759 626 aa3.53□□□□□ -1.84
SMC4-207ENST00000467263 TXLNGYQ9BZA5 131 aa3.53□□□□□ -1.84
SMC4-207ENST00000467263 ANKRD2Q9GZV1 360 aa3.53□□□□□ -1.84
SMC4-207ENST00000467263 GSN-AS1Q9NRJ2 163 aa3.53□□□□□ -1.84
SMC4-207ENST00000467263 NKIRAS2Q9NYR9 191 aa3.53□□□□□ -1.84
SMC4-207ENST00000467263 TEX28O15482 410 aa3.52□□□□□ -1.85
SMC4-207ENST00000467263 SOX3P41225 446 aa3.52□□□□□ -1.85
SMC4-207ENST00000467263 CLDN15P56746 228 aa3.52□□□□□ -1.85
SMC4-207ENST00000467263 GSCP56915 257 aaPredicted RBP3.52□□□□□ -1.85
SMC4-207ENST00000467263 CYCSP99999 105 aaKnown RBP3.52□□□□□ -1.85
SMC4-207ENST00000467263 CDH18Q13634 790 aa3.52□□□□□ -1.85
SMC4-207ENST00000467263 TMEM132DQ14C87 1099 aa3.52□□□□□ -1.85
SMC4-207ENST00000467263 CST9LP1Q5W188 147 aa3.52□□□□□ -1.85
SMC4-207ENST00000467263 CES4AQ5XG92 561 aa3.52□□□□□ -1.85
SMC4-207ENST00000467263 KRT80Q6KB66 452 aa3.52□□□□□ -1.85
SMC4-207ENST00000467263 CTR9Q6PD62 1173 aa3.52□□□□□ -1.85
SMC4-207ENST00000467263 CATSPERDQ86XM0 798 aa3.52□□□□□ -1.85
SMC4-207ENST00000467263 MFN1Q8IWA4 741 aa3.52□□□□□ -1.85
SMC4-207ENST00000467263 MAML2Q8IZL2 1156 aaPredicted RBP3.52□□□□□ -1.85
SMC4-207ENST00000467263 LSMEM1Q8N8F7 131 aa3.52□□□□□ -1.85
SMC4-207ENST00000467263 FAM222BQ8WU58 562 aa3.52□□□□□ -1.85
SMC4-207ENST00000467263 METTL21AQ8WXB1 218 aa3.52□□□□□ -1.85
SMC4-207ENST00000467263 ZNF300Q96RE9 604 aaPredicted RBP3.52□□□□□ -1.85
SMC4-207ENST00000467263 LRRC61Q9BV99 259 aa3.52□□□□□ -1.85
SMC4-207ENST00000467263 WWTR1Q9GZV5 400 aa3.52□□□□□ -1.85
SMC4-207ENST00000467263 C5AR2Q9P296 337 aa3.52□□□□□ -1.85
SMC4-207ENST00000467263 TRBV4-1A0A0J9YWV2 114 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 PI4K2BG5E9Z4 385 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 H0YAE9 185 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 FIBPO43427 364 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 PI15O43692 258 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 IDH3BO43837 385 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 BAG3O95817 575 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 HLA-FP30511 346 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 TSFMP43897 325 aaKnown RBP3.51□□□□□ -1.85
SMC4-207ENST00000467263 DSCR10P59022 87 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 CALCOCO2Q13137 446 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 NFATC2Q13469 925 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 CAMK2DQ13557 499 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 TRIM29Q14134 588 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 FASTKD3Q14CZ7 662 aaKnown RBP3.51□□□□□ -1.85
SMC4-207ENST00000467263 PTPN14Q15678 1187 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 LACTB2Q53H82 288 aaPredicted RBP3.51□□□□□ -1.85
SMC4-207ENST00000467263 RPUSD3Q6P087 351 aaKnown RBP3.51□□□□□ -1.85
SMC4-207ENST00000467263 PAQR6Q6TCH4 344 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 KIF6Q6ZMV9 814 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 Q8NBF4 154 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 AQP11Q8NBQ7 271 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 CAMKVQ8NCB2 501 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 NUP37Q8NFH4 326 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 PIK3R3Q92569 461 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 GTF3AQ92664 365 aaKnown RBP3.51□□□□□ -1.85
SMC4-207ENST00000467263 TSACCQ96A04 125 aaPredicted RBP3.51□□□□□ -1.85
SMC4-207ENST00000467263 VPS33AQ96AX1 596 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 RMDN1Q96DB5 314 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 C2orf48Q96LS8 159 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 CFAP57Q96MR6 1250 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 FAM218AQ96MZ4 157 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 LRRC3BQ96PB8 259 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 FAM129AQ9BZQ8 928 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 TEX10Q9NXF1 929 aaPredicted RBP3.51□□□□□ -1.85
SMC4-207ENST00000467263 MOB4Q9Y3A3 225 aa3.51□□□□□ -1.85
SMC4-207ENST00000467263 IGSF1Q8N6C5 1336 aa3.5□□□□□ -1.85
SMC4-207ENST00000467263 TRAV24A0A0B4J272 114 aa3.5□□□□□ -1.85
SMC4-207ENST00000467263 MPTX1A8MV57 137 aa3.5□□□□□ -1.85
SMC4-207ENST00000467263 SOCS3O14543 225 aa3.5□□□□□ -1.85
SMC4-207ENST00000467263 TBX10O75333 385 aa3.5□□□□□ -1.85
SMC4-207ENST00000467263 HSPA4P34932 840 aa3.5□□□□□ -1.85
SMC4-207ENST00000467263 IRX6P78412 446 aaPredicted RBP3.5□□□□□ -1.85
SMC4-207ENST00000467263 NUCB1Q02818 461 aa3.5□□□□□ -1.85
SMC4-207ENST00000467263 MZT1Q08AG7 82 aa3.5□□□□□ -1.85
SMC4-207ENST00000467263 OPCMLQ14982 345 aa3.5□□□□□ -1.85
SMC4-207ENST00000467263 MOGAT2Q3SYC2 334 aa3.5□□□□□ -1.85
SMC4-207ENST00000467263 KRBOX4Q5JUW0 171 aa3.5□□□□□ -1.85
SMC4-207ENST00000467263 LRTM2Q8N967 370 aa3.5□□□□□ -1.85
SMC4-207ENST00000467263 C11orf45Q8TAV5 145 aa3.5□□□□□ -1.85
SMC4-207ENST00000467263 ATP8B4Q8TF62 1192 aa3.5□□□□□ -1.85
SMC4-207ENST00000467263 KLHL5Q96PQ7 755 aa3.5□□□□□ -1.85
SMC4-207ENST00000467263 FZD8Q9H461 694 aa3.5□□□□□ -1.85
SMC4-207ENST00000467263 ST6GALNAC4Q9H4F1 302 aa3.5□□□□□ -1.85
SMC4-207ENST00000467263 MED20Q9H944 212 aa3.5□□□□□ -1.85
SMC4-207ENST00000467263 XAB2Q9HCS7 855 aaKnown RBP3.5□□□□□ -1.85
SMC4-207ENST00000467263 B3GAT2Q9NPZ5 323 aa3.5□□□□□ -1.85
SMC4-207ENST00000467263 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.5□□□□□ -1.85
SMC4-207ENST00000467263 POLLQ9UGP5 575 aa3.5□□□□□ -1.85
SMC4-207ENST00000467263 SWAP70Q9UH65 585 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms