RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 NADKO95544 446 aaPredicted RBP3.06□□□□□ -1.92
XRN1-206ENST00000467077 CLTBP09497 229 aa3.06□□□□□ -1.92
XRN1-206ENST00000467077 ZBTB25P24278 435 aa3.06□□□□□ -1.92
XRN1-206ENST00000467077 NMBRP28336 390 aa3.06□□□□□ -1.92
XRN1-206ENST00000467077 PSMC4P43686 418 aa3.06□□□□□ -1.92
XRN1-206ENST00000467077 NAP1L1P55209 391 aaKnown RBP3.06□□□□□ -1.92
XRN1-206ENST00000467077 RPS18P62269 152 aaKnown RBP3.06□□□□□ -1.92
XRN1-206ENST00000467077 SP3Q02447 781 aa3.06□□□□□ -1.92
XRN1-206ENST00000467077 AIMP1Q12904 312 aaKnown RBP3.06□□□□□ -1.92
XRN1-206ENST00000467077 TAF7Q15545 349 aaPredicted RBP3.06□□□□□ -1.92
XRN1-206ENST00000467077 CTU2Q2VPK5 515 aaKnown RBP3.06□□□□□ -1.92
XRN1-206ENST00000467077 GCNT6Q5T4J0 391 aa3.06□□□□□ -1.92
XRN1-206ENST00000467077 AK9Q5TCS8 1911 aa3.06□□□□□ -1.92
XRN1-206ENST00000467077 CFAP161Q6P656 301 aa3.06□□□□□ -1.92
XRN1-206ENST00000467077 HPS6Q86YV9 775 aa3.06□□□□□ -1.92
XRN1-206ENST00000467077 MCEMP1Q8IX19 187 aa3.06□□□□□ -1.92
XRN1-206ENST00000467077 SH3TC1Q8TE82 1336 aa3.06□□□□□ -1.92
XRN1-206ENST00000467077 DAZLQ92904 295 aaKnown RBP3.06□□□□□ -1.92
XRN1-206ENST00000467077 TIGD1Q96MW7 591 aa3.06□□□□□ -1.92
XRN1-206ENST00000467077 SOSTQ9BQB4 213 aa3.06□□□□□ -1.92
XRN1-206ENST00000467077 SDF4Q9BRK5 362 aa3.06□□□□□ -1.92
XRN1-206ENST00000467077 THUMPD2Q9BTF0 503 aaKnown RBP3.06□□□□□ -1.92
XRN1-206ENST00000467077 FTOQ9C0B1 505 aaKnown RBP eCLIP3.06□□□□□ -1.92
XRN1-206ENST00000467077 GHITMQ9H3K2 345 aa3.06□□□□□ -1.92
XRN1-206ENST00000467077 OLFML3Q9NRN5 406 aa3.06□□□□□ -1.92
XRN1-206ENST00000467077 AMACRQ9UHK6 382 aa3.06□□□□□ -1.92
XRN1-206ENST00000467077 TRMT112Q9UI30 125 aaKnown RBP3.06□□□□□ -1.92
XRN1-206ENST00000467077 SLC7A7Q9UM01 511 aa3.06□□□□□ -1.92
XRN1-206ENST00000467077 NTNG1Q9Y2I2 539 aa3.06□□□□□ -1.92
XRN1-206ENST00000467077 RABGAP1Q9Y3P9 1069 aa3.06□□□□□ -1.92
XRN1-206ENST00000467077 PCDHGA5Q9Y5G8 931 aa3.06□□□□□ -1.92
XRN1-206ENST00000467077 TRIOBPQ9H2D6 2365 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 ARAP2Q8WZ64 1704 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 AP3D1O14617 1153 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 BCL2L11O43521 198 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 RSL1D1O76021 490 aaKnown RBP3.05□□□□□ -1.92
XRN1-206ENST00000467077 GFPT2O94808 682 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 HSPA5P11021 654 aaKnown RBP3.05□□□□□ -1.92
XRN1-206ENST00000467077 ACP2P11117 423 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 CEBPBP17676 345 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 EIF2S2P20042 333 aaKnown RBP3.05□□□□□ -1.92
XRN1-206ENST00000467077 BDNFP23560 247 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 HADHAP40939 763 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 GARSP41250 739 aaKnown RBP3.05□□□□□ -1.92
XRN1-206ENST00000467077 RPS8P62241 208 aaKnown RBP3.05□□□□□ -1.92
XRN1-206ENST00000467077 SNRPEP62304 92 aaKnown RBP3.05□□□□□ -1.92
XRN1-206ENST00000467077 DLG2Q15700 870 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 MEA1Q16626 185 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 TAF1BQ53T94 588 aaPredicted RBP3.05□□□□□ -1.92
XRN1-206ENST00000467077 HSP90AB3PQ58FF7 597 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 SPATA1Q5VX52 437 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 ADGRF2Q8IZF7 708 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 ZNF843Q8N446 348 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 TTC39CQ8N584 583 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 DEFB123Q8N688 67 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 RFT1Q96AA3 541 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 TMEM143Q96AN5 459 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 GIMAP5Q96F15 307 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 RTP3Q9BQQ7 232 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 RPP25Q9BUL9 199 aaKnown RBP3.05□□□□□ -1.92
XRN1-206ENST00000467077 MXD3Q9BW11 206 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 HHATLQ9HCP6 504 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 HAUS2Q9NVX0 235 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 EPHA6Q9UF33 1036 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 FBXO2Q9UK22 296 aaPredicted RBP3.05□□□□□ -1.92
XRN1-206ENST00000467077 EXO1Q9UQ84 846 aaKnown RBP3.05□□□□□ -1.92
XRN1-206ENST00000467077 SPIN1Q9Y657 262 aaPredicted RBP3.05□□□□□ -1.92
XRN1-206ENST00000467077 A0A1B0GUL6 1792 aa3.05□□□□□ -1.92
XRN1-206ENST00000467077 REV3LO60673 3130 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 SPTBN5Q9NRC6 3674 aaKnown RBP3.04□□□□□ -1.92
XRN1-206ENST00000467077 IGHV4-4A0A075B6R2 117 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 PRSS51A0A1B0GVH4 220 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 MED19A0JLT2 244 aaPredicted RBP3.04□□□□□ -1.92
XRN1-206ENST00000467077 ELOVL7A1L3X0 281 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 A6NCN8 305 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 PTGES3LE9PB15 166 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 HTATSF1O43719 755 aaKnown RBP3.04□□□□□ -1.92
XRN1-206ENST00000467077 MITFO75030 526 aaPredicted RBP3.04□□□□□ -1.92
XRN1-206ENST00000467077 NGFP01138 241 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 PRLRP16471 622 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 HOXD13P35453 343 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 SUOXP51687 545 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 CLNS1AP54105 237 aaKnown RBP3.04□□□□□ -1.92
XRN1-206ENST00000467077 CDH11P55287 796 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 PLA2G7Q13093 441 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 RNF212Q495C1 297 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 Q7L0L9 218 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 COPS6Q7L5N1 327 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 APOBEC3FQ8IUX4 373 aaKnown RBP3.04□□□□□ -1.92
XRN1-206ENST00000467077 PRAC1Q96KF2 57 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 CFAP53Q96M91 514 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 CEP295NLQ96MC4 621 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 ABHD6Q9BV23 337 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 LAT2Q9GZY6 243 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 DEFB129Q9H1M3 183 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 TAS2R14Q9NYV8 317 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 NPAP1Q9NZP6 1156 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 LRWD1Q9UFC0 647 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 TBC1D29Q9UFV1 150 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms