RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 A0A1B0GVC2 190 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 BICDL2A1A5D9 508 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 FCHO1O14526 889 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 GAPDHSO14556 408 aaPredicted RBP11.77□□□□□ -0.53
UBR4-210ENST00000466969 TMCC2O75069 709 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 IL2RAP01589 272 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 IGHG3P01860 377 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 MMP2P08253 660 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 PDHA2P29803 388 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 TRHRP34981 398 aaPredicted RBP11.77□□□□□ -0.53
UBR4-210ENST00000466969 IDUAP35475 653 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 HMGCLP35914 325 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 SLC26A3P40879 764 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 AGTR2P50052 363 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 ACTN3Q08043 901 aaPredicted RBP11.77□□□□□ -0.53
UBR4-210ENST00000466969 PNOCQ13519 176 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 MINDY4Q4G0A6 757 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 FOXD4L5Q5VV16 416 aaPredicted RBP11.77□□□□□ -0.53
UBR4-210ENST00000466969 KLHL10Q6JEL2 608 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 CCDC70Q6NSX1 233 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 TRILQ7L0X0 811 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 PSTKQ8IV42 348 aaKnown RBP11.77□□□□□ -0.53
UBR4-210ENST00000466969 TNIP2Q8NFZ5 429 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 SLC22A8Q8TCC7 542 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 FOXD4L4Q8WXT5 416 aaPredicted RBP11.77□□□□□ -0.53
UBR4-210ENST00000466969 SLC22A18Q96BI1 424 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 DCUN1D1Q96GG9 259 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 C10orf90Q96M02 699 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 GSDMAQ96QA5 445 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 PEBP4Q96S96 227 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 VN1R1Q9GZP7 353 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 EXO5Q9H790 373 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 SMOXQ9NWM0 555 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 DUSP10Q9Y6W6 482 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 FREM1Q5H8C1 2179 aa11.77□□□□□ -0.53
UBR4-210ENST00000466969 MATN4O95460 622 aa11.76□□□□□ -0.53
UBR4-210ENST00000466969 CYC1P08574 325 aa11.76□□□□□ -0.53
UBR4-210ENST00000466969 RALBP11234 206 aa11.76□□□□□ -0.53
UBR4-210ENST00000466969 PPP1R2P41236 205 aa11.76□□□□□ -0.53
UBR4-210ENST00000466969 SYT16Q17RD7 645 aa11.76□□□□□ -0.53
UBR4-210ENST00000466969 PRR31Q5SQ13 230 aa11.76□□□□□ -0.53
UBR4-210ENST00000466969 FRMPD2BQ6IN97 320 aa11.76□□□□□ -0.53
UBR4-210ENST00000466969 PAPD4Q6PIY7 484 aaKnown RBP11.76□□□□□ -0.53
UBR4-210ENST00000466969 SEM1Q6ZVN7 128 aa11.76□□□□□ -0.53
UBR4-210ENST00000466969 ANKRD37Q7Z713 158 aa11.76□□□□□ -0.53
UBR4-210ENST00000466969 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.76□□□□□ -0.53
UBR4-210ENST00000466969 TBC1D21Q8IYX1 336 aa11.76□□□□□ -0.53
UBR4-210ENST00000466969 CYP4Z2PQ8N1L4 340 aa11.76□□□□□ -0.53
UBR4-210ENST00000466969 AMER3Q8N944 861 aa11.76□□□□□ -0.53
UBR4-210ENST00000466969 MCUQ8NE86 351 aa11.76□□□□□ -0.53
UBR4-210ENST00000466969 FAF2Q96CS3 445 aa11.76□□□□□ -0.53
UBR4-210ENST00000466969 TRIB3Q96RU7 358 aa11.76□□□□□ -0.53
UBR4-210ENST00000466969 LPAR4Q99677 370 aa11.76□□□□□ -0.53
UBR4-210ENST00000466969 RBM24Q9BX46 236 aaKnown RBP11.76□□□□□ -0.53
UBR4-210ENST00000466969 EPB41L4BQ9H329 900 aa11.76□□□□□ -0.53
UBR4-210ENST00000466969 L2HGDHQ9H9P8 463 aa11.76□□□□□ -0.53
UBR4-210ENST00000466969 RCOR1Q9UKL0 485 aa11.76□□□□□ -0.53
UBR4-210ENST00000466969 PLAGL1Q9UM63 463 aa11.76□□□□□ -0.53
UBR4-210ENST00000466969 NFS1Q9Y697 457 aa11.76□□□□□ -0.53
UBR4-210ENST00000466969 A0A0J9YVX5 310 aa11.75□□□□□ -0.53
UBR4-210ENST00000466969 SOWAHDA6NJG2 315 aa11.75□□□□□ -0.53
UBR4-210ENST00000466969 UBFD1O14562 309 aaKnown RBP11.75□□□□□ -0.53
UBR4-210ENST00000466969 TCF21O43680 179 aa11.75□□□□□ -0.53
UBR4-210ENST00000466969 SUSD5O60279 629 aa11.75□□□□□ -0.53
UBR4-210ENST00000466969 TUBB4AP04350 444 aa11.75□□□□□ -0.53
UBR4-210ENST00000466969 PSMA2P25787 234 aa11.75□□□□□ -0.53
UBR4-210ENST00000466969 CEACAM8P31997 349 aaPredicted RBP11.75□□□□□ -0.53
UBR4-210ENST00000466969 PRLHRP49683 370 aa11.75□□□□□ -0.53
UBR4-210ENST00000466969 MLF1P58340 268 aa11.75□□□□□ -0.53
UBR4-210ENST00000466969 CDR2Q01850 454 aa11.75□□□□□ -0.53
UBR4-210ENST00000466969 RPA4Q13156 261 aa11.75□□□□□ -0.53
UBR4-210ENST00000466969 SQLEQ14534 574 aa11.75□□□□□ -0.53
UBR4-210ENST00000466969 SIX1Q15475 284 aaPredicted RBP11.75□□□□□ -0.53
UBR4-210ENST00000466969 SF1Q15637 639 aaKnown RBP11.75□□□□□ -0.53
UBR4-210ENST00000466969 PCSK7Q16549 785 aa11.75□□□□□ -0.53
UBR4-210ENST00000466969 ATL3Q6DD88 541 aa11.75□□□□□ -0.53
UBR4-210ENST00000466969 POMZP3Q6PJE2 187 aa11.75□□□□□ -0.53
UBR4-210ENST00000466969 ABHD13Q7L211 337 aa11.75□□□□□ -0.53
UBR4-210ENST00000466969 DEPDC4Q8N2C3 294 aa11.75□□□□□ -0.53
UBR4-210ENST00000466969 FBXW8Q8N3Y1 598 aa11.75□□□□□ -0.53
UBR4-210ENST00000466969 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.75□□□□□ -0.53
UBR4-210ENST00000466969 ZUFSPQ96AP4 578 aa11.75□□□□□ -0.53
UBR4-210ENST00000466969 CAPZA3Q96KX2 299 aa11.75□□□□□ -0.53
UBR4-210ENST00000466969 SPATA13Q96N96 652 aa11.75□□□□□ -0.53
UBR4-210ENST00000466969 ESRP2Q9H6T0 727 aaKnown RBP11.75□□□□□ -0.53
UBR4-210ENST00000466969 TIMMDC1Q9NPL8 285 aa11.75□□□□□ -0.53
UBR4-210ENST00000466969 PSD3Q9NYI0 1048 aa11.75□□□□□ -0.53
UBR4-210ENST00000466969 SPO11Q9Y5K1 396 aa11.75□□□□□ -0.53
UBR4-210ENST00000466969 HEATR5AQ86XA9 2040 aa11.74□□□□□ -0.53
UBR4-210ENST00000466969 LOC105369274A0A096LPK9 316 aa11.74□□□□□ -0.53
UBR4-210ENST00000466969 LOC102723532A0A0G2JNH3 316 aa11.74□□□□□ -0.53
UBR4-210ENST00000466969 TARM1B6A8C7 271 aa11.74□□□□□ -0.53
UBR4-210ENST00000466969 GPRIN2O60269 458 aa11.74□□□□□ -0.53
UBR4-210ENST00000466969 CTSVO60911 334 aa11.74□□□□□ -0.53
UBR4-210ENST00000466969 RNF8O76064 485 aa11.74□□□□□ -0.53
UBR4-210ENST00000466969 TIMP3P35625 211 aa11.74□□□□□ -0.53
UBR4-210ENST00000466969 ZNF136P52737 540 aa11.74□□□□□ -0.53
UBR4-210ENST00000466969 CASP9P55211 416 aa11.74□□□□□ -0.53
UBR4-210ENST00000466969 FMO1Q01740 532 aa11.74□□□□□ -0.53
UBR4-210ENST00000466969 OGDHQ02218 1023 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms