RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 GABRDO14764 452 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 PPEF2O14830 753 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 MAGP20916 626 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 GADD45AP24522 165 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 GATMP50440 423 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 CLCNKAP51800 687 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 SLC10A7Q0GE19 358 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 C6orf52Q5T4I8 152 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 BRAT1Q6PJG6 821 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 DENND6BQ8NEG7 585 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 SUSD3Q96L08 255 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 CTPS2Q9NRF8 586 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 ZNF180Q9UJW8 692 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 UTS2RQ9UKP6 389 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 A0A0U1RQF3 1178 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 HTR3EA5X5Y0 456 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 F2P00734 622 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 TGFB1P01137 390 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 UGT1A1P22309 533 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 BDKRB1P46663 353 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 NRLP54845 237 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 MAZP56270 477 aaKnown RBP8.49□□□□□ -1.05
HPS4-209ENST00000466781 OR12D2P58182 307 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 KIAA1161Q6NSJ0 714 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 BEND4Q6ZU67 534 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 USP43Q70EL4 1123 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 P2RY8Q86VZ1 359 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 CLEC4CQ8WTT0 213 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 SLC13A3Q8WWT9 602 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 ERMAPQ96PL5 475 aaPredicted RBP8.49□□□□□ -1.05
HPS4-209ENST00000466781 HAPLN3Q96S86 360 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 CMKLR1Q99788 373 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 COPS4Q9BT78 406 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 CHIAQ9BZP6 476 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 ST6GALNAC4Q9H4F1 302 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 PCDHB16Q9NRJ7 776 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 SPATA6Q9NWH7 488 aaPredicted RBP8.49□□□□□ -1.05
HPS4-209ENST00000466781 TAC3Q9UHF0 121 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 RPL36Q9Y3U8 105 aaKnown RBP8.49□□□□□ -1.05
HPS4-209ENST00000466781 DNMT3AQ9Y6K1 912 aaPredicted RBP8.49□□□□□ -1.05
HPS4-209ENST00000466781 NUP98P52948 1817 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 A0A1W2PPL8 197 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 C2orf71A6NGG8 1288 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 CCNKO75909 580 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 TIMP1P01033 207 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 CDKN2BP42772 138 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 GRM2Q14416 872 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 GPR33Q49SQ1 333 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 GPAT4Q86UL3 456 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 BPIFB1Q8TDL5 484 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 ZNF599Q96NL3 588 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 GFM1Q96RP9 751 aaKnown RBP8.48□□□□□ -1.05
HPS4-209ENST00000466781 NPLQ9BXD5 320 aaPredicted RBP8.48□□□□□ -1.05
HPS4-209ENST00000466781 TMPRSS11EQ9UL52 423 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 RPL26L1Q9UNX3 145 aaKnown RBP8.48□□□□□ -1.05
HPS4-209ENST00000466781 TMEM5Q9Y2B1 443 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 PEX16Q9Y5Y5 336 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 ZSCAN5BA6NJL1 495 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 E7ENX8 843 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 SLC7A4O43246 635 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 B4GALT2O60909 372 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 HMGN1P05114 100 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 ATP1B2P14415 290 aaPredicted RBP8.48□□□□□ -1.05
HPS4-209ENST00000466781 CSF2RAP15509 400 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 RBM34P42696 430 aaKnown RBP8.48□□□□□ -1.05
HPS4-209ENST00000466781 RORCP51449 518 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 CSTF1Q05048 431 aaKnown RBP8.48□□□□□ -1.05
HPS4-209ENST00000466781 LRP8Q14114 963 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 FAM174BQ3ZCQ3 159 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 C1orf94Q6P1W5 598 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 TMPRSS9Q7Z410 1059 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 TOP1MTQ969P6 601 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 SLCO1B3Q9NPD5 702 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 ZCCHC3Q9NUD5 404 aaKnown RBP8.48□□□□□ -1.05
HPS4-209ENST00000466781 CYTH4Q9UIA0 394 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 GMEB1Q9Y692 573 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 FAM237AA0A1B0GTK4 181 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 KANTRA0A1W2PQU2 76 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 PAX7P23759 505 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 GLP1RP43220 463 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 SLC11A1P49279 550 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 PLP2Q04941 152 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 SLC5A9Q2M3M2 681 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 CYP27C1Q4G0S4 372 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 RBM48Q5RL73 367 aaKnown RBP8.48□□□□□ -1.05
HPS4-209ENST00000466781 MORN1Q5T089 497 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 IRF2BP2Q7Z5L9 587 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 OR5K1Q8NHB7 308 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 PHOSPHO1Q8TCT1 267 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 HBEGFQ99075 208 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 TFB2MQ9H5Q4 396 aaKnown RBP8.48□□□□□ -1.05
HPS4-209ENST00000466781 EIF2B3Q9NR50 452 aaKnown RBP8.48□□□□□ -1.05
HPS4-209ENST00000466781 ERVK-18Q9QC07 812 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 BAIAP2Q9UQB8 552 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 DDX60Q8IY21 1712 aaKnown RBP8.48□□□□□ -1.05
HPS4-209ENST00000466781 ITGB4P16144 1822 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 SRRM3A6NNA2 597 aaPredicted RBP8.48□□□□□ -1.05
HPS4-209ENST00000466781 HSPA12AO43301 675 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 CBFA2T3O75081 653 aa8.48□□□□□ -1.05
HPS4-209ENST00000466781 RPP14O95059 124 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms