RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 TMIGD1Q6UXZ0 262 aa11.68□□□□□ -0.54
VPS16-206ENST00000466415 CCDC121Q6ZUS5 278 aa11.68□□□□□ -0.54
VPS16-206ENST00000466415 GATAD2AQ86YP4 633 aa11.68□□□□□ -0.54
VPS16-206ENST00000466415 SLC25A45Q8N413 288 aa11.68□□□□□ -0.54
VPS16-206ENST00000466415 GBP7Q8N8V2 638 aaPredicted RBP11.68□□□□□ -0.54
VPS16-206ENST00000466415 FNDC5Q8NAU1 212 aa11.68□□□□□ -0.54
VPS16-206ENST00000466415 GPR156Q8NFN8 814 aa11.68□□□□□ -0.54
VPS16-206ENST00000466415 ABHD11Q8NFV4 315 aa11.68□□□□□ -0.54
VPS16-206ENST00000466415 OR2A1Q8NGT9 310 aa11.68□□□□□ -0.54
VPS16-206ENST00000466415 AHCYL2Q96HN2 611 aaKnown RBP11.68□□□□□ -0.54
VPS16-206ENST00000466415 C3orf30Q96M34 536 aa11.68□□□□□ -0.54
VPS16-206ENST00000466415 PRAP1Q96NZ9 151 aa11.68□□□□□ -0.54
VPS16-206ENST00000466415 COL25A1Q9BXS0 654 aaPredicted RBP11.68□□□□□ -0.54
VPS16-206ENST00000466415 PITHD1Q9GZP4 211 aaPredicted RBP11.68□□□□□ -0.54
VPS16-206ENST00000466415 NMUR2Q9GZQ4 415 aa11.68□□□□□ -0.54
VPS16-206ENST00000466415 MYLK2Q9H1R3 596 aa11.68□□□□□ -0.54
VPS16-206ENST00000466415 AKTIPQ9H8T0 292 aa11.68□□□□□ -0.54
VPS16-206ENST00000466415 FARSBQ9NSD9 589 aaKnown RBP11.68□□□□□ -0.54
VPS16-206ENST00000466415 MRGBPQ9NV56 204 aa11.68□□□□□ -0.54
VPS16-206ENST00000466415 GEMIN8Q9NWZ8 242 aaKnown RBP11.68□□□□□ -0.54
VPS16-206ENST00000466415 PPM1DO15297 605 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 PRICKLE3O43900 615 aaPredicted RBP11.67□□□□□ -0.54
VPS16-206ENST00000466415 PEX11AO75192 247 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 RSL1D1O76021 490 aaKnown RBP11.67□□□□□ -0.54
VPS16-206ENST00000466415 PROS1P07225 676 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 TYRP1P17643 537 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 SERPINB1P30740 379 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 NEK2P51955 445 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 EPHA4P54764 986 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 RPL38P63173 70 aaKnown RBP11.67□□□□□ -0.54
VPS16-206ENST00000466415 HMGCS1Q01581 520 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 MAD2L1Q13257 205 aaPredicted RBP11.67□□□□□ -0.54
VPS16-206ENST00000466415 E2F2Q14209 437 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 NR0B2Q15466 257 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 CCDC6Q16204 474 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 SLC5A12Q1EHB4 618 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 FOXR1Q6PIV2 292 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 SPESP1Q6UW49 350 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 LARP4Q71RC2 724 aaKnown RBP eCLIP11.67□□□□□ -0.54
VPS16-206ENST00000466415 TRIM46Q7Z4K8 759 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 SPATA19Q7Z5L4 167 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 C17orf82Q86X59 251 aaPredicted RBP11.67□□□□□ -0.54
VPS16-206ENST00000466415 SLC35F3Q8IY50 421 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 LAS2Q8IYD9 372 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 OR7G3Q8NG95 312 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 WDR20Q8TBZ3 569 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 SAP25Q8TEE9 199 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 RSC1A1Q92681 617 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 MARK4Q96L34 752 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 MTERF1Q99551 399 aaKnown RBP11.67□□□□□ -0.54
VPS16-206ENST00000466415 PRRX2Q99811 253 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 DPH7Q9BTV6 452 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 SPNS1Q9H2V7 528 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 IL21RQ9HBE5 538 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 LRTM1Q9HBL6 345 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 SLC6A20Q9NP91 592 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 TMEM184CQ9NVA4 438 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 NMRK1Q9NWW6 199 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 ANKMY1Q9P2S6 941 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 LRIT1Q9P2V4 623 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 ADGRE2Q9UHX3 823 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 SNX7Q9UNH6 387 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 SLC12A4Q9UP95 1085 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 RNF215Q9Y6U7 377 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 CAPN7Q9Y6W3 813 aa11.67□□□□□ -0.54
VPS16-206ENST00000466415 A0A0J9YY10 115 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 TRBC2A0A5B9 178 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 SERTM1A2A2V5 107 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 ANKDD1BA6NHY2 528 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 OR1F1O43749 312 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 NUDT21O43809 227 aaKnown RBP11.66□□□□□ -0.54
VPS16-206ENST00000466415 ENGP17813 658 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 MAPK1P28482 360 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 CAPZBP47756 277 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 ERVK-8P63133 956 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 CSNK1G2P78368 415 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 UBAP2LQ14157 1087 aaKnown RBP11.66□□□□□ -0.54
VPS16-206ENST00000466415 SQLEQ14534 574 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 RPS6KA2Q15349 733 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 AP5B1Q2VPB7 878 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 INAVAQ3KP66 663 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 KIAA1614Q5VZ46 1190 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 TMEM198Q66K66 360 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 IRGCQ6NXR0 463 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 CLNKQ7Z7G1 428 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 TRIM73Q86UV7 250 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 FAM129CQ86XR2 697 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 FAM20CQ8IXL6 584 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.66□□□□□ -0.54
VPS16-206ENST00000466415 FITM2Q8N6M3 262 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 TTLQ8NG68 377 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 OR6C4Q8NGE1 309 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 OR2T11Q8NH01 316 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 OR4C6Q8NH72 309 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 HUS1BQ8NHY5 278 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 OR2A14Q96R47 310 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 ACPTQ9BZG2 426 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 SMOC1Q9H4F8 434 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 NT5DC2Q9H857 520 aa11.66□□□□□ -0.54
VPS16-206ENST00000466415 BRF2Q9HAW0 419 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms