RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 GMPRP36959 345 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 GP5P40197 560 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 FOXL2P58012 376 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 GUCA2AQ02747 115 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 SP140Q13342 867 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 NAE1Q13564 534 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 FRG1Q14331 258 aaKnown RBP9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 USP10Q14694 798 aaKnown RBP9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 ARHGAP19Q14CB8 494 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 TBR1Q16650 682 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 ZC3H12BQ5HYM0 836 aaKnown RBP9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 AGTRAPQ6RW13 159 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 PCSK4Q6UW60 755 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 FAM198BQ6UWH4 519 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 OR4N4Q8N0Y3 316 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 SPATA6LQ8N4H0 392 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 DTWD1Q8N5C7 304 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 UHMK1Q8TAS1 419 aaKnown RBP9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 SNRNP27Q8WVK2 155 aaKnown RBP9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 EXT2Q93063 718 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 RNF166Q96A37 237 aaPredicted RBP9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 PYCR2Q96C36 320 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 ZIM3Q96PE6 472 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 RBBP8Q99708 897 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 CPNE1Q99829 537 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 EGFL8Q99944 293 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 TRIM54Q9BYV2 358 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 SEMA4CQ9C0C4 833 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 ZDHHC18Q9NUE0 388 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 ARL15Q9NXU5 204 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 GPN3Q9UHW5 284 aaPredicted RBP9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 SNX7Q9UNH6 387 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 SH2B3Q9UQQ2 575 aa9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 FARSAQ9Y285 508 aaKnown RBP9.33□□□□□ -0.92
RTFDC1-205ENST00000466260 IGKV1-8A0A0C4DH67 115 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 OR2A25A4D2G3 310 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 FAM159BA6NKW6 160 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 C21orf140B9A014 251 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 H7BY64 318 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 TERTO14746 1132 aaKnown RBP9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 HAT1O14929 419 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 CREG1O75629 220 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 ACSL3O95573 720 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 HBQ1P09105 142 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 GSTA2P09210 222 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 MSL3P1P0C860 447 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 MYBL2P10244 700 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 NR1D1P20393 614 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 HSD17B2P37059 387 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 MC1RQ01726 317 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 IFFO1Q0D2I5 559 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 CHAF1BQ13112 559 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 IL10RAQ13651 578 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 BMPR2Q13873 1038 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 TSNQ15631 228 aaKnown RBP9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 LINC00303Q3SY05 128 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 WASHC2DQ5SRD0 308 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 TLDC1Q6P9B6 456 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 BORAQ6PGQ7 559 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 RAPH1Q70E73 1250 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 RNF44Q7L0R7 432 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 CMC1Q7Z7K0 106 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 LRRC56Q8IYG6 542 aaPredicted RBP9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 NKAPQ8N5F7 415 aaKnown RBP9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 FBXO15Q8NCQ5 510 aaPredicted RBP9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 ANKRD49Q8WVL7 239 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 ZUFSPQ96AP4 578 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 CCDC138Q96M89 665 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 PRAP1Q96NZ9 151 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 ZFYVE21Q9BQ24 234 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 PHACTR1Q9C0D0 580 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 CDC42EP4Q9H3Q1 356 aaKnown RBP9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 PARVBQ9HBI1 364 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 CUTCQ9NTM9 273 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 NINJ2Q9NZG7 142 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 IFT80Q9P2H3 777 aaPredicted RBP9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 CTNNAL1Q9UBT7 734 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 SRPK3Q9UPE1 567 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 AP1M2Q9Y6Q5 423 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 MAU2Q9Y6X3 613 aa9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 DSPP15924 2871 aaKnown RBP9.32□□□□□ -0.92
RTFDC1-205ENST00000466260 FAM208BQ5VWN6 2430 aa9.31□□□□□ -0.92
RTFDC1-205ENST00000466260 FEZF1A0PJY2 475 aa9.31□□□□□ -0.92
RTFDC1-205ENST00000466260 ARGFXA6NJG6 315 aa9.31□□□□□ -0.92
RTFDC1-205ENST00000466260 TARM1B6A8C7 271 aa9.31□□□□□ -0.92
RTFDC1-205ENST00000466260 H0YGG7 62 aa9.31□□□□□ -0.92
RTFDC1-205ENST00000466260 H3BMH7 237 aa9.31□□□□□ -0.92
RTFDC1-205ENST00000466260 FFAR3O14843 346 aa9.31□□□□□ -0.92
RTFDC1-205ENST00000466260 SLC16A5O15375 505 aa9.31□□□□□ -0.92
RTFDC1-205ENST00000466260 GPR42O15529 346 aa9.31□□□□□ -0.92
RTFDC1-205ENST00000466260 FKBP9O95302 570 aa9.31□□□□□ -0.92
RTFDC1-205ENST00000466260 C1QAP02745 245 aa9.31□□□□□ -0.92
RTFDC1-205ENST00000466260 NUDT17P0C025 328 aa9.31□□□□□ -0.92
RTFDC1-205ENST00000466260 CDH1P12830 882 aa9.31□□□□□ -0.92
RTFDC1-205ENST00000466260 STMN1P16949 149 aa9.31□□□□□ -0.92
RTFDC1-205ENST00000466260 PTPN4P29074 926 aa9.31□□□□□ -0.92
RTFDC1-205ENST00000466260 OTX2P32243 289 aa9.31□□□□□ -0.92
RTFDC1-205ENST00000466260 PHBP35232 272 aa9.31□□□□□ -0.92
RTFDC1-205ENST00000466260 SPRP35270 261 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms