RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 ERN2Q76MJ5 926 aaKnown RBP1.84□□□□□ -2.11
CCDC93-205ENST00000466171 NUP54Q7Z3B4 507 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 SPATA21Q7Z572 469 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 TLK2Q86UE8 772 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 HPS6Q86YV9 775 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 TMEM139Q8IV31 216 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 FAM219AQ8IW50 185 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 CDK20Q8IZL9 346 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 CPSF7Q8N684 471 aaKnown RBP1.84□□□□□ -2.11
CCDC93-205ENST00000466171 POM121L12Q8N7R1 296 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 OR5AP2Q8NGF4 316 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 OR1J1Q8NGS3 322 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 OR13J1Q8NGT2 312 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 SSMEM1Q8WWF3 244 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 KCNE4Q8WWG9 221 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 ROBO4Q8WZ75 1007 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 DYRK2Q92630 601 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 SLCO2A1Q92959 643 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 SPSB1Q96BD6 273 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 JAKMIP1Q96N16 626 aaKnown RBP1.84□□□□□ -2.11
CCDC93-205ENST00000466171 SPAG5Q96R06 1193 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 MYADMQ96S97 322 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 FEVQ99581 238 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 CPNE1Q99829 537 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 CITED2Q99967 270 aaPredicted RBP1.84□□□□□ -2.11
CCDC93-205ENST00000466171 MGME1Q9BQP7 344 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 SLC25A23Q9BV35 468 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 EDEM3Q9BZQ6 932 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 VN1R1Q9GZP7 353 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 Q9N2K0 584 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 SERINC1Q9NRX5 453 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.84□□□□□ -2.11
CCDC93-205ENST00000466171 POLLQ9UGP5 575 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 GTF3C4Q9UKN8 822 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 ABT1Q9ULW3 272 aaKnown RBP1.84□□□□□ -2.11
CCDC93-205ENST00000466171 NOL7Q9UMY1 257 aaKnown RBP1.84□□□□□ -2.11
CCDC93-205ENST00000466171 CELA1Q9UNI1 258 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 TMED3Q9Y3Q3 217 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 LIPGQ9Y5X9 500 aa1.84□□□□□ -2.11
CCDC93-205ENST00000466171 A0A1W2PPQ1 181 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 MEX3AA1L020 520 aaKnown RBP1.83□□□□□ -2.12
CCDC93-205ENST00000466171 NEMP2A6NFY4 417 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 CLDN4O14493 209 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 GAPDHSO14556 408 aaPredicted RBP1.83□□□□□ -2.12
CCDC93-205ENST00000466171 AP5Z1O43299 807 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 PRKRAO75569 313 aaKnown RBP1.83□□□□□ -2.12
CCDC93-205ENST00000466171 CLDN1O95832 211 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 HPRP00739 348 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 IGHV2-70P01814 119 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 GBAP04062 536 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 MMP12P39900 470 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 MNDAP41218 407 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 UBASH3AP57075 661 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 HERV-K104P61576 105 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 CX3CL1P78423 397 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 PRKCZQ05513 592 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 PAX8Q06710 450 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 BFSP1Q12934 665 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 NFATC2Q13469 925 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 ITGA7Q13683 1181 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 SCARB2Q14108 478 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 MCMDC2Q4G0Z9 681 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 SYT14P1Q58G82 188 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 DCAF10Q5QP82 559 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 ELFN2Q5R3F8 820 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 C1QTNF12Q5T7M4 302 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 C11orf63Q6NUN7 778 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 C11orf57Q6ZUT1 292 aaPredicted RBP1.83□□□□□ -2.12
CCDC93-205ENST00000466171 HOGA1Q86XE5 327 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 SIX6OS1Q8N1H7 587 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 Q8N7P7 452 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 THAP8Q8NA92 274 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 PPFIBP2Q8ND30 876 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 PRSS33Q8NF86 280 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.83□□□□□ -2.12
CCDC93-205ENST00000466171 DEPDC1BQ8WUY9 529 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 ATL1Q8WXF7 558 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 IRGQQ8WZA9 623 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 NSMAFQ92636 917 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 EXT2Q93063 718 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 MOB3AQ96BX8 217 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 CCDC114Q96M63 670 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 FNBP1Q96RU3 617 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 RAD9AQ99638 391 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 BTBD10Q9BSF8 475 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 DESI2Q9BSY9 194 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 URM1Q9BTM9 101 aaKnown RBP1.83□□□□□ -2.12
CCDC93-205ENST00000466171 PRRG4Q9BZD6 226 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 PUS3Q9BZE2 481 aaKnown RBP1.83□□□□□ -2.12
CCDC93-205ENST00000466171 FZD8Q9H461 694 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 XAB2Q9HCS7 855 aaKnown RBP1.83□□□□□ -2.12
CCDC93-205ENST00000466171 A4GALTQ9NPC4 353 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 THEGQ9P2T0 379 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 CACNG4Q9UBN1 327 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 DAPK2Q9UIK4 370 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 MTUS1Q9ULD2 1270 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 RIPK3Q9Y572 518 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 PCDH11YQ9BZA8 1340 aa1.83□□□□□ -2.12
CCDC93-205ENST00000466171 A0A1W2PN81 502 aa1.82□□□□□ -2.12
CCDC93-205ENST00000466171 A0A1W2PPW3 197 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms