RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 GFM1Q96RP9 751 aaKnown RBP10.71□□□□□ -0.69
VCP-204ENST00000466100 PLCD4Q9BRC7 762 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 DPH7Q9BTV6 452 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 SARGQ9BW04 601 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 CAPS2Q9BXY5 557 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 CHRNA10Q9GZZ6 450 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 SEMA6CQ9H3T2 930 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 MANSC1Q9H8J5 431 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 SYNPO2LQ9H987 977 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 GEMIN8Q9NWZ8 242 aaKnown RBP10.71□□□□□ -0.69
VCP-204ENST00000466100 ANKMY1Q9P2S6 941 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 STK38LQ9Y2H1 464 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 KLHL20Q9Y2M5 609 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 ANGPTL3Q9Y5C1 460 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 FER1L5A0AVI2 2057 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 IGHV5-10-1A0A0J9YXX1 117 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 H7BY64 318 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 CLGNO14967 610 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 TOX3O15405 576 aaPredicted RBP10.7□□□□□ -0.7
VCP-204ENST00000466100 PRAMEF10O60809 474 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 ESRRBO95718 433 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 OTCP00480 354 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 EBLN1P0CF75 366 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 C1GALT1C1LP0DN25 315 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 CDH3P22223 829 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 HRH2P25021 359 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 GABRA4P48169 554 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 SLC1A6P48664 564 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 CCR8P51685 355 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 CCNG1P51959 295 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 GYS2P54840 703 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 PKNOX1P55347 436 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 INSM1Q01101 510 aaPredicted RBP10.7□□□□□ -0.7
VCP-204ENST00000466100 IRF8Q02556 426 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 RELAQ04206 551 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 ZFP36L1Q07352 338 aaKnown RBP10.7□□□□□ -0.7
VCP-204ENST00000466100 STX3Q13277 289 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 SPIDRQ14159 915 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 SLBPQ14493 270 aaKnown RBP eCLIP10.7□□□□□ -0.7
VCP-204ENST00000466100 RBBP7Q16576 425 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 LIPJQ5W064 366 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 GRHL2Q6ISB3 625 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 FIGLAQ6QHK4 219 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 GPRIN3Q6ZVF9 776 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 ARHGAP22Q7Z5H3 698 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 B3GNT8Q7Z7M8 397 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 SLCO6A1Q86UG4 719 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 CUZD1Q86UP6 607 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 C19orf47Q8N9M1 422 aaKnown RBP10.7□□□□□ -0.7
VCP-204ENST00000466100 ZNF740Q8NDX6 193 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 OR4F6Q8NGB9 312 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 PPP1R14CQ8TAE6 165 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 DYDC1Q8WWB3 177 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 KLHL6Q8WZ60 621 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 GRAMD1AQ96CP6 724 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 PTCD3Q96EY7 689 aaKnown RBP10.7□□□□□ -0.7
VCP-204ENST00000466100 SLC41A2Q96JW4 573 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 PRAP1Q96NZ9 151 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 CDK15Q96Q40 435 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 EFCAB11Q9BUY7 163 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 ZNF768Q9H5H4 540 aaKnown RBP10.7□□□□□ -0.7
VCP-204ENST00000466100 TMEM184CQ9NVA4 438 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 TRPS1Q9UHF7 1281 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 PILRAQ9UKJ1 303 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 SNX7Q9UNH6 387 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 BTRCQ9Y297 605 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 RNF11Q9Y3C5 154 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 CACNA1AO00555 2505 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 ASPMQ8IZT6 3477 aa10.7□□□□□ -0.7
VCP-204ENST00000466100 SPAARA0A1B0GVQ0 90 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 SLC9B1P1A6NJY1 282 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 GIPC1O14908 333 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 HAT1O14929 419 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 HCRTR1O43613 425 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 CTSVO60911 334 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 OR4F21O95013 312 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 CLDN9O95484 217 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 ENO1P06733 434 aaKnown RBP10.69□□□□□ -0.7
VCP-204ENST00000466100 FTH1P19P0C7X4 201 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 NEFHP12036 1026 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 CEACAM1P13688 526 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 JUPP14923 745 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 MPSTP25325 297 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 HNF4AP41235 474 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 FOXA1P55317 472 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 E2F1Q01094 437 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 MEF2AQ02078 507 aaPredicted RBP10.69□□□□□ -0.7
VCP-204ENST00000466100 NAA25Q14CX7 972 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 XKR6Q5GH73 641 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 CACHD1Q5VU97 1274 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 ATG16L1Q676U5 607 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 RNF44Q7L0R7 432 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 LAS2Q8IYD9 372 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 LRRC8CQ8TDW0 803 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 ZUFSPQ96AP4 578 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 CCDC74BQ96LY2 380 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 KCNA7Q96RP8 456 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 KLHL25Q9H0H3 589 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 SYNDIG1Q9H7V2 258 aa10.69□□□□□ -0.7
VCP-204ENST00000466100 ACTR8Q9H981 624 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms