RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 LIPCP11150 499 aa16.24■□□□□ 0.19
USP39-211ENST00000465282 CRHR1P34998 444 aa16.24■□□□□ 0.19
USP39-211ENST00000465282 HSPA7P48741 367 aa16.24■□□□□ 0.19
USP39-211ENST00000465282 RPS15AP62244 130 aaKnown RBP16.24■□□□□ 0.19
USP39-211ENST00000465282 YBX1P67809 324 aaKnown RBP16.24■□□□□ 0.19
USP39-211ENST00000465282 CSNK1G2P78368 415 aa16.24■□□□□ 0.19
USP39-211ENST00000465282 SLC18A2Q05940 514 aa16.24■□□□□ 0.19
USP39-211ENST00000465282 CDC16Q13042 620 aa16.24■□□□□ 0.19
USP39-211ENST00000465282 SETDB1Q15047 1291 aa16.24■□□□□ 0.19
USP39-211ENST00000465282 PWWP2BQ6NUJ5 590 aa16.24■□□□□ 0.19
USP39-211ENST00000465282 ADCK2Q7Z695 626 aa16.24■□□□□ 0.19
USP39-211ENST00000465282 PROSER1Q86XN7 944 aa16.24■□□□□ 0.19
USP39-211ENST00000465282 DTX1Q86Y01 620 aa16.24■□□□□ 0.19
USP39-211ENST00000465282 TMEM126BQ8IUX1 230 aa16.24■□□□□ 0.19
USP39-211ENST00000465282 OR1L3Q8NH93 324 aa16.24■□□□□ 0.19
USP39-211ENST00000465282 ZCCHC14Q8WYQ9 949 aaKnown RBP16.24■□□□□ 0.19
USP39-211ENST00000465282 NEIL2Q969S2 332 aa16.24■□□□□ 0.19
USP39-211ENST00000465282 PMEPA1Q969W9 287 aa16.24■□□□□ 0.19
USP39-211ENST00000465282 LRFN5Q96NI6 719 aa16.24■□□□□ 0.19
USP39-211ENST00000465282 SELENOSQ9BQE4 189 aa16.24■□□□□ 0.19
USP39-211ENST00000465282 TMEM79Q9BSE2 394 aa16.24■□□□□ 0.19
USP39-211ENST00000465282 PITHD1Q9GZP4 211 aaPredicted RBP16.24■□□□□ 0.19
USP39-211ENST00000465282 EHD1Q9H4M9 534 aa16.24■□□□□ 0.19
USP39-211ENST00000465282 PELI2Q9HAT8 420 aa16.24■□□□□ 0.19
USP39-211ENST00000465282 ARGLU1Q9NWB6 273 aaPredicted RBP16.24■□□□□ 0.19
USP39-211ENST00000465282 CUEDC1Q9NWM3 386 aaPredicted RBP16.24■□□□□ 0.19
USP39-211ENST00000465282 SENP1Q9P0U3 644 aa16.24■□□□□ 0.19
USP39-211ENST00000465282 GRID1Q9ULK0 1009 aa16.24■□□□□ 0.19
USP39-211ENST00000465282 AHCTF1Q8WYP5 2266 aa16.24■□□□□ 0.19
USP39-211ENST00000465282 IGF2RP11717 2491 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 APC2O95996 2303 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 SEC16AO15027 2179 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 STX16-NPEPL1H3BU86 382 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 GOLGA8RI6L899 631 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 K7EPI3 171 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 STX16O14662 325 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 RRP8O43159 456 aaKnown RBP16.23■□□□□ 0.19
USP39-211ENST00000465282 CPNE3O75131 537 aaKnown RBP16.23■□□□□ 0.19
USP39-211ENST00000465282 CDH1P12830 882 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 KRT4P19013 534 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 TAC1P20366 129 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 CXCR2P25025 360 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 GDF5P43026 501 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 PIK3CGP48736 1102 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 ARSFP54793 590 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 EMP3P54852 163 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 PCDH1Q08174 1060 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 ZNF844Q08AG5 666 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 GRM7Q14831 915 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 PCBP2Q15366 365 aaKnown RBP eCLIP16.23■□□□□ 0.19
USP39-211ENST00000465282 PDK4Q16654 411 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 PFKFB4Q16877 469 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 FAM214AQ32MH5 1076 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 KRT71Q3SY84 523 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 NXPE4Q6UWF7 544 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 TRABD2AQ86V40 505 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 TMEM151AQ8N4L1 468 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 RERGQ96A58 199 aaPredicted RBP16.23■□□□□ 0.19
USP39-211ENST00000465282 MKS1Q9NXB0 559 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 TMEM216Q9P0N5 145 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 CPSF2Q9P2I0 782 aaKnown RBP16.23■□□□□ 0.19
USP39-211ENST00000465282 OPTCQ9UBM4 332 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 SRPK3Q9UPE1 567 aa16.23■□□□□ 0.19
USP39-211ENST00000465282 TPRP12270 2363 aaKnown RBP16.23■□□□□ 0.19
USP39-211ENST00000465282 TRBC2A0A5B9 178 aa16.22■□□□□ 0.19
USP39-211ENST00000465282 FITM1A5D6W6 292 aa16.22■□□□□ 0.19
USP39-211ENST00000465282 COPEO14579 308 aa16.22■□□□□ 0.19
USP39-211ENST00000465282 CLGNO14967 610 aa16.22■□□□□ 0.19
USP39-211ENST00000465282 ZSCAN9O15535 394 aaPredicted RBP16.22■□□□□ 0.19
USP39-211ENST00000465282 TLX3O43711 291 aaPredicted RBP16.22■□□□□ 0.19
USP39-211ENST00000465282 H2AFYO75367 372 aaKnown RBP16.22■□□□□ 0.19
USP39-211ENST00000465282 KIAA0754O94854 1291 aa16.22■□□□□ 0.19
USP39-211ENST00000465282 DLGAP3O95886 979 aa16.22■□□□□ 0.19
USP39-211ENST00000465282 CCNYL3P0C7X3 344 aa16.22■□□□□ 0.19
USP39-211ENST00000465282 EPB42P16452 691 aa16.22■□□□□ 0.19
USP39-211ENST00000465282 EIF2S3P41091 472 aaKnown RBP16.22■□□□□ 0.19
USP39-211ENST00000465282 DEFB110Q30KQ9 67 aa16.22■□□□□ 0.19
USP39-211ENST00000465282 CCDC153Q494R4 210 aa16.22■□□□□ 0.19
USP39-211ENST00000465282 MANEAQ5SRI9 462 aa16.22■□□□□ 0.19
USP39-211ENST00000465282 ATG9BQ674R7 924 aa16.22■□□□□ 0.19
USP39-211ENST00000465282 NLGN4XQ8N0W4 816 aa16.22■□□□□ 0.19
USP39-211ENST00000465282 ESX1Q8N693 406 aa16.22■□□□□ 0.19
USP39-211ENST00000465282 NLGN4YQ8NFZ3 816 aaPredicted RBP16.22■□□□□ 0.19
USP39-211ENST00000465282 CCDC126Q96EE4 140 aa16.22■□□□□ 0.19
USP39-211ENST00000465282 SEC16BQ96JE7 1060 aa16.22■□□□□ 0.19
USP39-211ENST00000465282 PKNOX2Q96KN3 472 aa16.22■□□□□ 0.19
USP39-211ENST00000465282 ZIM3Q96PE6 472 aa16.22■□□□□ 0.19
USP39-211ENST00000465282 OR2A5Q96R48 311 aa16.22■□□□□ 0.19
USP39-211ENST00000465282 DPH2Q9BQC3 489 aaPredicted RBP16.22■□□□□ 0.19
USP39-211ENST00000465282 AIF1LQ9BQI0 150 aa16.22■□□□□ 0.19
USP39-211ENST00000465282 FAM117AQ9C073 453 aa16.22■□□□□ 0.19
USP39-211ENST00000465282 SLC7A5P2Q9GIP4 190 aa16.22■□□□□ 0.19
USP39-211ENST00000465282 ACTR5Q9H9F9 607 aaPredicted RBP16.22■□□□□ 0.19
USP39-211ENST00000465282 SH2B3Q9UQQ2 575 aa16.22■□□□□ 0.19
USP39-211ENST00000465282 ANKRD11Q6UB99 2663 aaPredicted RBP16.22■□□□□ 0.19
USP39-211ENST00000465282 URB1O60287 2271 aaKnown RBP16.22■□□□□ 0.19
USP39-211ENST00000465282 A0A0J9YVX5 310 aa16.21■□□□□ 0.19
USP39-211ENST00000465282 H0YGG7 62 aa16.21■□□□□ 0.19
USP39-211ENST00000465282 TK2O00142 265 aa16.21■□□□□ 0.19
USP39-211ENST00000465282 HAT1O14929 419 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms